Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1221 ATGGAAGAAGTTCAAGAGTCTCAACCTCAATCAACTCTAGGTAAAGAAAATGCAGATGAAGTGGTTGATGAAAGTTCTGAATATGGTAAAGGGGAAACACCAGAAGAATTATTGAGTAGACCTCCAAAAGTTGATTCTGAAGTTGAGGTTCTTCATGAGAAGGTTACTAAACAAATAATTAAGGAAGGTCATGGCCAAAAACCTTCCAAGTATTCAACATGTTTCTTCCATTACAGGGCATGGGCTGAGAACACGGAGCACAAATTTGAAGATACATGGCAGGAGCAACGACCAATTGAGATGGTAATAGGAAAAGAGAAGAAAGAAATGACTGGTTTGGGCATTGGGGTGGCAAGCATGAAAGCTGGGGAGCGTGCGTTGCTGCGTGTGAACTGGGAATTAGGATATGGAAAGGAGGGAAGTTTTTCTTTTCCAAATGTTCCACCCATGGCAGATTTAGTTTATGAAGTTGAGCTCATTGGTTTTGATGAAACAAAAGATGGAAAAGCTCGTAGTGATATGACAGTGGAGGAGAGGATTGGTGCAGCAGATCGTAGAAAGATGGACGGAAATGTTCTGTTTCAGGAAAATAAACTAGAGGAGGCCATGCAACAGTATGAAATGGCTATAGCTTATATGGGAGATGACTTCATGTTCCAGTTATTTGGGAAGTATAGGGATATGGCATTGGCTGTAAAGAATCCGTGCCATCTTAACACGGCAGCCTGTCTGATTAAGCTGAACCGGTACGAAGAAGCTATAGGACAATGCAGCATTGTATTGAGTGAGGATGAGAACAATTTGAAGGCATTATTTAGGAGAGGTAAGGCTAGAGCAGCACTTGGGCAAACAGATGCTGCTAGGGAAGATTTTCTAAAAGCGCGTAAACAAGCCCCTGAAGATAAAGCAATTGCAAGAGAATTGAAATTACTTGCTGAACATGACAAAGCTATTTATCAAAAGCAGAAAGAGATCTATAAAGGAATATTTGGACCAAGGCCACAACCAGTACCTAAGAAAAGGAATTTGCTTTTACTTGTTTGGCAGTGGTTAGTTTCAGTGTTTTATAGCTTTATCACACTCTTCAACCGCGAAAAGAACAAATCTGACTAA 1113 0.4061 MEEVQESQPQSTLGKENADEVVDESSEYGKGETPEELLSRPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFFHYRAWAENTEHKFEDTWQEQRPIEMVIGKEKKEMTGLGIGVASMKAGERALLRVNWELGYGKEGSFSFPNVPPMADLVYEVELIGFDETKDGKARSDMTVEERIGAADRRKMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLIKLNRYEEAIGQCSIVLSEDENNLKALFRRGKARAALGQTDAAREDFLKARKQAPEDKAIARELKLLAEHDKAIYQKQKEIYKGIFGPRPQPVPKKRNLLLLVWQWLVSVFYSFITLFNREKNKSD* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1221 370 MobiDBLite consensus disorder prediction 17 46 - -
Tpr4g1221 370 SUPERFAMILY TPR-like 175 327 IPR011990 GO:0005515
Tpr4g1221 370 Gene3D - 39 164 IPR046357 GO:0003755
Tpr4g1221 370 MobiDBLite consensus disorder prediction 1 15 - -
Tpr4g1221 370 SMART tpr_5 234 267 IPR019734 GO:0005515
Tpr4g1221 370 SMART tpr_5 183 216 IPR019734 GO:0005515
Tpr4g1221 370 SMART tpr_5 268 301 IPR019734 GO:0005515
Tpr4g1221 370 Gene3D Tetratricopeptide repeat domain 165 296 IPR011990 GO:0005515
Tpr4g1221 370 ProSiteProfiles TPR repeat profile. 268 301 IPR019734 GO:0005515
Tpr4g1221 370 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 71 163 IPR001179 GO:0003755
Tpr4g1221 370 MobiDBLite consensus disorder prediction 1 46 - -
Tpr4g1221 370 SUPERFAMILY FKBP-like 34 162 - -
Tpr4g1221 370 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 67 160 IPR001179 GO:0003755
Tpr4g1221 370 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP42-RELATED 31 331 - -
Tpr4g1221 370 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 31 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1221 Tpr-Chr4 11833769 11838024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1221 48 336 Calmodulin-binding Proteins AT5G48570 32.770 3.12e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1221 - - gmx:100790587 654.44