Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1219 ATGGCAATAGCATTAACACAATGCTCAGAAAAGCTAGGATACCTAATATTTCTGTTAAGCAAAAACTTCATCATGTTTATGTCGATGGTGATTGCATGCAATGGTTTACATTATCTAATAAAGCCTTATCAACAACCCCGCATTACTTCCGACATAATTGTTGGACTAGTTGTGGGAAATGCGCCATTTTTACGCAATTTATATGAACAATTCAATCGTACATTTGGATTTATCATTGATTTCGGCATGATGTGTTACATGTTTGCTTTGGGTGTAGAAATGGATCCTTATGTACTCTTCAGAAGACCAAGTAGAGATGTTCAAGTTGCATATGCAGGAATAATCATAACATTCATCTTAGCATTAGCCATAACACCCCTTCTCCATTATTTCACAAGTGACGTGCAATCGCATTTACTAGAATTCCATCTCGCCCTCTCAATTCTTCTCTCAAGTACTGCATCGCCTGTCCTAACCCGTCTTATAACAAGTCTCAACATAGGAAAGTCGGATATCGGGAAACTTGTCATAGCAGCAGGGATGTATTCGGATTTTCTCAGCTCTTTACTTCTTTCAGTCGGCTACATTTCAATGCCTTTGGACACATTTTGCGACAATGTAGAAAAAAAAGGGCGTTTTAAAAGAGCGGTTGTAATGAATAGTGCTGTTATTGGCCAAGCATTGTTCACAGCAACGGTTTCGCCAATTTTCATGAGATGGGTTAACAATGAAAACCCAGAAGGGAAACCTATGAAAGGCTCACATTTAGTATTATCAATAGCATTCATGGTTATGAGTTGTGCTTCATCAATACTATATAATTTTAGTCCTATTCTAAGTGCATTTATAACTGGAATTTGTTTTCCTAGGGAAGGAAGAGTTTCCAAATGGGTTATTAGCAAAATCAATTACTTGTTAACAACTATATTTTTTCCAATATTTTTCTTGTGGATGGGTTATGCAGCTGATTTTAGGCAATTTCAGCCTTCACAATTAGGAACATGGGGAAGATTATTTATACCTGTCTTAATTGTAATGGGAGGTAAAGTTATTGGAACACTTGTTTGTGGTGCAATTCTTGGATTTCATTGGCCTGAATCAGTTGCTATTGGATTGTTACTTGCTACCAAGGGACATTTTCATATCTACATGGCTATCAAAGTGATGGGTTGTGGCTCCAATACTTCGGCCGGCATTGGGTTGATATTTGCAATATTTTTTACAGTGGTGCATGCCCCGTCCGTCGTAGCACATATCATCAAACGAGCCAAGAGAAAAGTACCTACTCATCGCATGTCCCTCCAATTGCTTGATCCATTAAGTGAGCTAAGGATTCTGCTATGCCTTCATGGACCTGACAACATTTCAGCTTCCATCAACTTCATGGAGATCACAAGAGGAAAATCAGATCCCGGCATTCTTGTATACGTCACGGAAATGATTGAACTTACCAATCAAATAGCAGTCACAGTAGAAAGAGGTGAAGGAATAGAAACAACAAATGTAAAAGATAAGGATGTCATGGAGATGAGAGACACAATAACTAGCTCATTTCAAGCTTATATAGACGATGATGGTGATGGTGTTACGCTCAAAAGGACAATGGCAGTGTCGACAATTAATAACATGGCCCAGGACATTTGCACTTTGGCAGAGGATTTGATGATTGCTCTTATCGTTCTACCATTCCATAGAAGGCAATGTGTGGATGGAAAATTGGATGGTGGCCATCAAGGATTCAGATATGTGAACAGAAAGTTATTGAAGAGTGCTCCTTGTTCCGTGGGGATTCTAGTGAATAGAGGCTTAGGGTCCTTTGAAAAGATATCAAAGACTCAGGTATCACTCAATGTGGCAACATTGTTCATTGGTGGAAAAGACGATAGAGAAGCACTTGCCTACACCGGTCGCGTAGCAGGGCATCCAGGAGTGAAACTCACAGTTATAAGATTCCTAGTAGATACTAGTGTTGAATCTTCAAGAATTTCGGCATATAGGGTAAGCCTTCCAGATAACGGCGAGGAGATGGGGCTAGACGATGAATGCTTTGCACATTTCTATGATAAATATATTTCTGGAGGTCGAATTTCGTATATGGAGAAGCATCTTGCTAATGCAGCTGAGACTTTCTCTACTCTCAGATCATTTGAAGGACAGTACTCACTGGTCATTGTAGGAAGAGAAGGTGGACTGAACTCGATATTGACAAAGGGAATGAATGATTGGCAACAGTGTCCGGAACTTGGACCGATAGGGGATGTTCTTTCAGGACCGGACTTCTCAAAAACAGTGTCAGTGTTAGTAATCCAACAACACAAACATAAAGGAGAAATAGATGGACTTGATGAAGAATTCAATATCATGTAG 2367 0.395 MAIALTQCSEKLGYLIFLLSKNFIMFMSMVIACNGLHYLIKPYQQPRITSDIIVGLVVGNAPFLRNLYEQFNRTFGFIIDFGMMCYMFALGVEMDPYVLFRRPSRDVQVAYAGIIITFILALAITPLLHYFTSDVQSHLLEFHLALSILLSSTASPVLTRLITSLNIGKSDIGKLVIAAGMYSDFLSSLLLSVGYISMPLDTFCDNVEKKGRFKRAVVMNSAVIGQALFTATVSPIFMRWVNNENPEGKPMKGSHLVLSIAFMVMSCASSILYNFSPILSAFITGICFPREGRVSKWVISKINYLLTTIFFPIFFLWMGYAADFRQFQPSQLGTWGRLFIPVLIVMGGKVIGTLVCGAILGFHWPESVAIGLLLATKGHFHIYMAIKVMGCGSNTSAGIGLIFAIFFTVVHAPSVVAHIIKRAKRKVPTHRMSLQLLDPLSELRILLCLHGPDNISASINFMEITRGKSDPGILVYVTEMIELTNQIAVTVERGEGIETTNVKDKDVMEMRDTITSSFQAYIDDDGDGVTLKRTMAVSTINNMAQDICTLAEDLMIALIVLPFHRRQCVDGKLDGGHQGFRYVNRKLLKSAPCSVGILVNRGLGSFEKISKTQVSLNVATLFIGGKDDREALAYTGRVAGHPGVKLTVIRFLVDTSVESSRISAYRVSLPDNGEEMGLDDECFAHFYDKYISGGRISYMEKHLANAAETFSTLRSFEGQYSLVIVGREGGLNSILTKGMNDWQQCPELGPIGDVLSGPDFSKTVSVLVIQQHKHKGEIDGLDEEFNIM* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1219 788 Pfam Sodium/hydrogen exchanger family 31 420 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr4g1219 788 Gene3D - 20 429 IPR038770 -
Tpr4g1219 788 PANTHER CATION/H+ EXCHANGER 3 4 786 - -
Tpr4g1219 788 PANTHER CATION/H + ANTIPORTER 4 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1219 Tpr-Chr4 11796903 11800838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1219 24 788 Antiporter Super Family AT3G52080 49.744 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1219 - - gmx:100815945 1165.98