Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g1208 | ATGTCCAACCATAATCATAATCACACATTTGCAATTTCATCTACCTTATTGATATTTTTGTTGCTAAATCTATGTCAAATCACTACAAGCCTAACACAATTTGAAGCGTTGCTAAATTGGAAACAAAGTCTACCTCCACAACCAATTCTTGATTCATGGATCATTAACAACTCAAGTTCAACACAAACACCATGTTCATGGAGAGGTATAACTTGTGATTCAAAAGGAAGTGTTACAATCATAAACTTAGCTTATACTGGACTTGAAGGTACTCTTAATCACTTAAACTTATCAGTTTTTCCAAACCTTCTTCGTCTCGATCTTAAAACAAATAATCTCACCGGTGTCATACCTGAAAACATCGGCGTTCTTTCGAAACTCCAATTTCTTGATCTTTCTACTAATTATCTAAATGGAACTTTGCCTCTTTCTATAGCTAATTTGACTCAAGTTTACGAGCTTGATGTCTCGAGAAACGATGTATCAGGTATACTAGACCCTCGTTTGTTTCCTGATGGAACTAATAAGCCCAGTTCCAGAACTGGGCTTATTGGCATCAGGAATCTTCTTTTCCAAGATACCCTTTTAGGCGGTCCACTACCGATCGAAATCGGGAATATAAAAAACTTGACTTTACTAGCTCTTGATGGAAACAATTTCTCTGGCCCAATTCCTTCATCTTTAGGAAACTGTAAACATTTAAGCATTCTTAGATTAAATGAAAATCAATTCTCTGGTCCAATTCCACCAAGTATTGGCAAATTAACCAACTTAACTGATCTTAGATTTTTCACCAACAACCTAAATGGAACTGTACCACAAGAATTTGGAAACCTTTCATCTTTGGTTGTGTTGCATCTTGCTGAGAACAATTTCATTGGTGAGTTACCACCAGAAATTTGCAAAAGTGGAAAACTTGTTAATTTCAGTTCAGCTTACAACAGTTTCACTGGTCCAATTCCAAGAAGTCTTAGAAACTGCCCTTCTTTGTATAGAGTTAGAATGGAATACAACGAGTTAACCGGTTATGCAGATCAAGATTTCGGAGTTTATCCGAATCTTACTTACATAGATTTCAGCTATAATATGGTTGAAGGTGGTTTATCTGCTAAATGGGGTTCATGCAAAAACTTGCAATCACTTAAAATGGCGGGTAATTCGGTTAGTGGAAAAATTCCAAGTGAGATTTTTCATTTGGATCAATTACAAGAGCTTGATCTATCATTTAACCGATTATCGGGAACTATTCCTTCACAAATTGGAAATTCTTCGACTTTGTCGAACTTAAATTTGAATGGAAATAGGCTTTCTGGTAAGATACCTAATGAAATTGGAAAGCTTTCGAATTTGCAAACTTTAGACCTTTCGATGAACACGTTGTTTGGTGAAATTCCAGCTCAGATAGGAGATTGTTCGAATTTGTTGAATTTGAATTTGAGTAACAATCATTTGAATGGAACAATTCCTTTCCAAATTGGAAATCTTGGTTCATTACAAGACTTTTTGGATTTGAGTTACAATTCGATTTCAGGGGCAATTCCTGGTAATATCGGTAAGCTTTCGAGTTTGATAAGCTTAAACATCTCAAACAATAATTTATCAGGTAAACTTCCTGATCAAATTAGTGGAATGTTGAGTTTGTCAAGTCTTAATCTTTCTAACAATCATTTGGAGGGTAATGTTCCTAAAGATGGCATTTTCAAATTGAACTCTTCTAATTCAATTGATTTGAGCAATAACGAAGGGCTATGTGGTAATTTCAAAGGTTTGAAACCTTGTAATGTCTCACTCATTGATCCTAATGGTGATGGGAGTAACAAAAAAAAAGTTGTGATTCCAATTGTTGCTTCATTAGGAGGTGTACTTTTTCTTTCATTGATAATTGTTGGCATAATTTTGTTATGCTATAAGAGAAAATCAAGAACTACAAGAACAAAGTCTTTATTAGATACACCAAATCCATTTTCAATTTGGTATTTCAATGGAAGAGTTGTGTACGGCGACATAATCGAAGCTACAAACAATTTCGACGACAAGCATTGCATAGGCGAAGGAGCGTTCGGGAATGTTTACAAAGCCGAATTGAAAGGTGGTCAAATATTCGCGGTGAAAAAGTTGAAATGTGATGAAGAGAATTTAGACAAAGAAAGTATAAAAACATTTGAAAGTGAAGTTGAAGCTATGACAGAAACAAGGCATAGAAACATTGTCAAGCTTTATGGATTTTGTTGTGAAGGAATGCATACATTTCTTGTTTATGAGTATATGGATAGAGGAAGTTTAGCTGATATGTTGAATGATAATAAGAAAGCATTGGAACTTGATTGGTTTAAAAGATTTGAAATTGTTAAAGGTGTTGCAAGTGCTCTTTCTTATATGCATCATGATTGTTCTCCAATTTTGATTCATAGAGATATATCAAGTAAGAATATTTTGTTATCAATGGATCTTGAAGCTCATGTTTCAGATTTTGGTACTGCAAGGTTTCTTAAGCCAAATTCACCTATTTGGACTTCATTTGCTGGCACTTATGGCTATGCTGCTCCAGAGCTTGCATACACAATGGCAGTGACAGAGAAATGTGATGTATTCAGCTTTGGTGTTTTAGCATTTGAAATTCTAACAGGAAAACATCCTGGTGATCTTGTTTCTTACATACAAACATCTAATGATCAAAAGATAGATTTCAAAGAGATTTTAGACCCTCGCCTCGCTTCGCCTCCAAAGAACATTTTGAAGGAGTTGGCATTGGTTGCTAATTTAGCTCTTTCTTGTTTACACACAAATCCTCAATCTAGACCAACCATGAGAAGCATTGCCCAGTTGCTAGAAATGGAGACTGCATTTAACACTTGA | 2856 | 0.3508 | MSNHNHNHTFAISSTLLIFLLLNLCQITTSLTQFEALLNWKQSLPPQPILDSWIINNSSSTQTPCSWRGITCDSKGSVTIINLAYTGLEGTLNHLNLSVFPNLLRLDLKTNNLTGVIPENIGVLSKLQFLDLSTNYLNGTLPLSIANLTQVYELDVSRNDVSGILDPRLFPDGTNKPSSRTGLIGIRNLLFQDTLLGGPLPIEIGNIKNLTLLALDGNNFSGPIPSSLGNCKHLSILRLNENQFSGPIPPSIGKLTNLTDLRFFTNNLNGTVPQEFGNLSSLVVLHLAENNFIGELPPEICKSGKLVNFSSAYNSFTGPIPRSLRNCPSLYRVRMEYNELTGYADQDFGVYPNLTYIDFSYNMVEGGLSAKWGSCKNLQSLKMAGNSVSGKIPSEIFHLDQLQELDLSFNRLSGTIPSQIGNSSTLSNLNLNGNRLSGKIPNEIGKLSNLQTLDLSMNTLFGEIPAQIGDCSNLLNLNLSNNHLNGTIPFQIGNLGSLQDFLDLSYNSISGAIPGNIGKLSSLISLNISNNNLSGKLPDQISGMLSLSSLNLSNNHLEGNVPKDGIFKLNSSNSIDLSNNEGLCGNFKGLKPCNVSLIDPNGDGSNKKKVVIPIVASLGGVLFLSLIIVGIILLCYKRKSRTTRTKSLLDTPNPFSIWYFNGRVVYGDIIEATNNFDDKHCIGEGAFGNVYKAELKGGQIFAVKKLKCDEENLDKESIKTFESEVEAMTETRHRNIVKLYGFCCEGMHTFLVYEYMDRGSLADMLNDNKKALELDWFKRFEIVKGVASALSYMHHDCSPILIHRDISSKNILLSMDLEAHVSDFGTARFLKPNSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEILTGKHPGDLVSYIQTSNDQKIDFKEILDPRLASPPKNILKELALVANLALSCLHTNPQSRPTMRSIAQLLEMETAFNT* | 952 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g1208 | 951 | PRINTS | Leucine-rich repeat signature | 402 | 415 | - | - | |
Tpr4g1208 | 951 | PRINTS | Leucine-rich repeat signature | 447 | 460 | - | - | |
Tpr4g1208 | 951 | PANTHER | MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE | 1 | 947 | - | - | |
Tpr4g1208 | 951 | SUPERFAMILY | RNI-like | 248 | 583 | - | - | |
Tpr4g1208 | 951 | Gene3D | Ribonuclease Inhibitor | 111 | 173 | IPR032675 | - | |
Tpr4g1208 | 951 | Gene3D | Phosphorylase Kinase; domain 1 | 639 | 755 | - | - | |
Tpr4g1208 | 951 | SUPERFAMILY | Protein kinase-like (PK-like) | 649 | 945 | IPR011009 | - | |
Tpr4g1208 | 951 | Gene3D | Ribonuclease Inhibitor | 464 | 594 | IPR032675 | - | |
Tpr4g1208 | 951 | Gene3D | Ribonuclease Inhibitor | 368 | 463 | IPR032675 | - | |
Tpr4g1208 | 951 | Gene3D | Ribonuclease Inhibitor | 269 | 367 | IPR032675 | - | |
Tpr4g1208 | 951 | Gene3D | Transferase(Phosphotransferase) domain 1 | 756 | 950 | - | - | |
Tpr4g1208 | 951 | ProSiteProfiles | Protein kinase domain profile. | 676 | 949 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr4g1208 | 951 | SMART | serkin_6 | 676 | 949 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr4g1208 | 951 | Pfam | Leucine rich repeat N-terminal domain | 32 | 73 | IPR013210 | - | |
Tpr4g1208 | 951 | Gene3D | Ribonuclease Inhibitor | 174 | 268 | IPR032675 | - | |
Tpr4g1208 | 951 | SUPERFAMILY | L domain-like | 60 | 271 | - | - | |
Tpr4g1208 | 951 | ProSitePatterns | Protein kinases ATP-binding region signature. | 682 | 705 | IPR017441 | GO:0005524 | |
Tpr4g1208 | 951 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 1 | 947 | - | - | |
Tpr4g1208 | 951 | SMART | LRR_typ_2 | 447 | 471 | IPR003591 | - | |
Tpr4g1208 | 951 | SMART | LRR_typ_2 | 520 | 543 | IPR003591 | - | |
Tpr4g1208 | 951 | SMART | LRR_typ_2 | 124 | 148 | IPR003591 | - | |
Tpr4g1208 | 951 | SMART | LRR_typ_2 | 544 | 569 | IPR003591 | - | |
Tpr4g1208 | 951 | SMART | LRR_typ_2 | 399 | 423 | IPR003591 | - | |
Tpr4g1208 | 951 | SMART | LRR_typ_2 | 279 | 303 | IPR003591 | - | |
Tpr4g1208 | 951 | Pfam | Leucine rich repeat | 401 | 460 | IPR001611 | GO:0005515 | |
Tpr4g1208 | 951 | Pfam | Leucine rich repeat | 502 | 557 | IPR001611 | GO:0005515 | |
Tpr4g1208 | 951 | Pfam | Protein kinase domain | 677 | 941 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr4g1208 | 951 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 801 | 813 | IPR008266 | GO:0004672|GO:0006468 | |
Tpr4g1208 | 951 | Gene3D | Ribonuclease Inhibitor | 25 | 110 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g1208 | Tpr-Chr4 | 11630909 | 11634865 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g1208 | 15 | 849 | Receptor kinase-like Gene Family | AT4G08850 | 39.829 | 0.0 | 593 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Tpr4g1208 | Pkinase | 2.8e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g1208 | - | - | aprc:113866080 | 1446.8 |