Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1184 ATGAATACTTTTTCTCATGTTCCCCCTGGTTTTAGGTTCCATCCCACAGATGAGGAACTTGTTGATTATTACCTTAGGAAGAAAATTGCTTCAAGAAGAATTGACCTTGATGTCATAAAAGATGTTGACCTTTACAAAATTGAACCATGGGATCTTCAAGAGCTATGCAGAATAGGAACAGAAGAACAAAATGAATGGTATTTTTTTAGCCATAAAGATAAGAAGTATCCAACTGGGACAAGAACAAATAGAGCAACTGCAGCTGGATTTTGGAAAGCAACAGGAAGAGACAAAGCAATATATAGTAAACATGATCTTATAGGAATGAGGAAAACCTTAGTGTTTTATAAAGGTAGAGCTCCAAATGGACAAAAATCAGATTGGATCATGCATGAGTATAGGCTTGAAACAGATGAAAATGGTGCACCACAGGAAGAAGGATGGGTTGTATGTAGAGTCTTCAAAAAGAGAGTGACAACAACTATGCGCAAAATGAATGAGCATGACTCTCCTTGTTGGTATGATGACCAAGTTTCATTCATGCAAGACATGGAATCACCAAATCAAACCTCTCAATCAAATTTGATTTACCAACAACTTCCATATCCATGCAAAAAAGAGCTAGATAATTTACCATACCAAAACTTACCTCATGAACATTTTCTTAATCTACCACTTTTAGAGAGTCCAAAACTTCTTCAATCATCTTCAAACATAACCTCTAACCCAATTGTGACAACAACATATGGTACTATAGATCATGCAAACTCTATGCTTCCTTCATCATCAATGCTACTACAAGAAGAACAAATCCTAAACCCTAATCAACAAAACTTTCATGCTATGTATGGAAACAATTCCAATATTGATCAACAAGGTGTTGTTGATGAACAAGTTACTGATTGGAGAGTTCTTGACAAGTTTGTTGCTTCACAACTAAGTCAAGATCAAGATGCATCTAAAGATAATAATAACACAAGCAACATTTTTCATGGCAATGTGCAATTGAGAAATTTGGAGAAACAAGAAATGGTGCCACATGAAAATGCTTCAACATCAAACTCAAATTGTCCAATTGATTTGTGGAAATAA 1092 0.3507 MNTFSHVPPGFRFHPTDEELVDYYLRKKIASRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGAPQEEGWVVCRVFKKRVTTTMRKMNEHDSPCWYDDQVSFMQDMESPNQTSQSNLIYQQLPYPCKKELDNLPYQNLPHEHFLNLPLLESPKLLQSSSNITSNPIVTTTYGTIDHANSMLPSSSMLLQEEQILNPNQQNFHAMYGNNSNIDQQGVVDEQVTDWRVLDKFVASQLSQDQDASKDNNNTSNIFHGNVQLRNLEKQEMVPHENASTSNSNCPIDLWK* 364
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1184 363 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Tpr4g1184 363 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Tpr4g1184 363 MobiDBLite consensus disorder prediction 344 363 - -
Tpr4g1184 363 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 351 - -
Tpr4g1184 363 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 351 - -
Tpr4g1184 363 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Tpr4g1184 363 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Tpr4g1184 363 MobiDBLite consensus disorder prediction 345 363 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr4g1184 Tpr-Chr4 11335360 11341286 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1184 1 363 NAC Transcription Factor Family AT1G12260 56.604 3.48e-135 387
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr4g1184 NAM 5.2e-38 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1184 - - gmx:100815845 542.347
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1184 4 11335360 11341286 Tpr4g1184 4 11335360 11341286 ECH