Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1178 ATGGAAGCCTTTTTTTCAAAGATCCTTCTAATAATTTTTGCCTTTAGTTTCATCACACATTCTATCCAAGCAAATGAAGGACCATACCAACAATCCAACACATTATTCATTAAAAACTCTTGTAGTTCAACAACTTACCCAAGACTATGCTACACCTCCCTAGTGAAGCATGCCGATTTCATTCAAACTAATCATGTGCTTTTAACGGGCACAGCCTTGAACGTGACTCTTGCATCGGCAAAATCAACCTCGGCTATGATGTCAACTCTCGCTAAAAGCCAAGGGCTAAAGCCAAGAGAGGCTGCAGCTATGAAGGATTGTGTCGAAGTGTTAAGTGACTCTGTTGATGAACTTCGAAGGTCTATCGACGAGATGAGTCGTCTTAGTACTTCAAATTTTGAGCTAACCATGAGTGATGTACAAACTTGGGTTAGTGCTGCTTTGACCGATCAAAGTACTTGTACCGACGGATTTCAAGAGGTTAATGCAGATGGAGAAATTAAGACTGTAGTGAGAGGGAGAATTGTTCAAATAGCTCAATTGACTAGCAATGCTTTGGCTTTGGTAAATAAACTTGCCACTTCACATCCTTAA 594 0.4024 MEAFFSKILLIIFAFSFITHSIQANEGPYQQSNTLFIKNSCSSTTYPRLCYTSLVKHADFIQTNHVLLTGTALNVTLASAKSTSAMMSTLAKSQGLKPREAAAMKDCVEVLSDSVDELRRSIDEMSRLSTSNFELTMSDVQTWVSAALTDQSTCTDGFQEVNADGEIKTVVRGRIVQIAQLTSNALALVNKLATSHP* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1178 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 194 IPR035513 -
Tpr4g1178 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 193 - -
Tpr4g1178 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 192 IPR035513 -
Tpr4g1178 197 Coils Coil 108 128 - -
Tpr4g1178 197 CDD PMEI-like_3 40 194 - -
Tpr4g1178 197 SMART PMEI_2 32 188 IPR006501 GO:0004857
Tpr4g1178 197 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 192 IPR006501 GO:0004857
Tpr4g1178 197 PANTHER 21 KDA PROTEIN-LIKE 8 193 - -
Tpr4g1178 197 Pfam Plant invertase/pectin methylesterase inhibitor 36 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1178 Tpr-Chr4 11256566 11257408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1178 37 192 Carbohydrate Esterase AT1G53830 30.380 2.02e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1178 - - gmx:100305537 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1178 4 11256566 11257408 Tpr4g1178 4 11256566 11257408 ECH