Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1177 ATGGAGGCCTTTACTTCAAAGATCCTTCTAATAATTTTTGCCTTTAGTTTCATCACACACTCTATCCAAGCAAATGAAGGACCATACCAACAATCCAACACATTATTCATTAGAAACTCTTGCAGTTCAACAACTTACCCAAAACTATGCTACACCTCACTAGTGAAGCATGCCGATCTCATTCAAACAAATCACGTGCTTTTAACCGGCACAGCCTTAAACGTGACTCTTGCATCGGCAAAATCAACCTCAGCTATGATGTCAACTCTCGCTAAAAGCCAAGGGCTAAAGCCCAAAGAGGTTGCGGCTATGAAGGATTGTGTCGAAGTGTTAAGTGATTCAGTTGATGAACTCCGAAGGTCTATCGATGAGATGAGTCGTCTTAGTACTTCAAATTTTGAGCTAACGATGAGTGATGTACAAACTTGGGTTAGTGCTGCTTTGACGGATCAGAGTACTTGTACCGACGGATTTCAAGAGATTAATGCGAACGGAGAAATTAAGACCGTTGTGAGAGGGAGAATTGTTCAAGTAGCTCAATTGACTAGCAATGCTTTAGCTTTGATAAATAAACTTGCCACTTCACATCCTTAA 594 0.4074 MEAFTSKILLIIFAFSFITHSIQANEGPYQQSNTLFIRNSCSSTTYPKLCYTSLVKHADLIQTNHVLLTGTALNVTLASAKSTSAMMSTLAKSQGLKPKEVAAMKDCVEVLSDSVDELRRSIDEMSRLSTSNFELTMSDVQTWVSAALTDQSTCTDGFQEINANGEIKTVVRGRIVQVAQLTSNALALINKLATSHP* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1177 197 SMART PMEI_2 32 188 IPR006501 GO:0004857
Tpr4g1177 197 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 192 IPR006501 GO:0004857
Tpr4g1177 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 194 IPR035513 -
Tpr4g1177 197 Coils Coil 108 128 - -
Tpr4g1177 197 CDD PMEI-like_3 40 194 - -
Tpr4g1177 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 193 - -
Tpr4g1177 197 Pfam Plant invertase/pectin methylesterase inhibitor 36 188 IPR006501 GO:0004857
Tpr4g1177 197 PANTHER 21 KDA PROTEIN-LIKE 8 193 - -
Tpr4g1177 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 192 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1177 Tpr-Chr4 11252147 11252986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1177 37 192 Carbohydrate Esterase AT3G14310 31.447 3.55e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1177 - - gmx:100305537 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1177 4 11252147 11252986 Tpr4g1177 4 11252147 11252986 ECH