Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1176 ATGGAAGCCTTTTCTACAAAGATCTTTCTAATAGTTTTTGCCTTTAGTTTCATCACATACTCTATCCAAGCAAATGAAAGCCAACAATCCAACACATTATTCATTAGAAATTCTTGTAGTTCAACAACTTATCCAAAATTATGTTACACTTCCCTAGTGAAACACGCCGATTCCATTCAAACAAATCGTGTACTCTTAACAAGCACGGCTTTGAACGTGACTCTTGCATCAGCAAAATCAACATCGACTTTCATGTCAACTCTCGCTAAAAGCCATGGACTGAATCCGAAAGAGGTTGCGGCTATGAAGGATTGCATAGAAGTGCTAAGTGGATCCGTTGATGAACTCCGAAGGTCTATCGATGAGATTAGTCGTCTTAGAACTTCAAATTTTGAACTAACGATGAGTGATATACAAACTTGGGTTAGTGCTGCTTTGACGGATGAGAACACTTGTACCGACGGATTCCAAGAGATTAATGCAACGGGGAATATTAAGACAATAGTTAGAGGGAAAATTGTCCAAGTAGCTCAATTGACTAGCAATGCTTTGGCTTTGATAAATAAACTTGCTACTTCACATCCTTAA 588 0.3827 MEAFSTKIFLIVFAFSFITYSIQANESQQSNTLFIRNSCSSTTYPKLCYTSLVKHADSIQTNRVLLTSTALNVTLASAKSTSTFMSTLAKSHGLNPKEVAAMKDCIEVLSGSVDELRRSIDEISRLRTSNFELTMSDIQTWVSAALTDENTCTDGFQEINATGNIKTIVRGKIVQVAQLTSNALALINKLATSHP* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1176 195 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 192 - -
Tpr4g1176 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 190 IPR035513 -
Tpr4g1176 195 CDD PMEI-like_3 38 192 - -
Tpr4g1176 195 PANTHER 21 KDA PROTEIN-LIKE 4 192 - -
Tpr4g1176 195 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 190 IPR006501 GO:0004857
Tpr4g1176 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 192 IPR035513 -
Tpr4g1176 195 Pfam Plant invertase/pectin methylesterase inhibitor 34 186 IPR006501 GO:0004857
Tpr4g1176 195 SMART PMEI_2 30 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1176 Tpr-Chr4 11247614 11248641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1176 25 190 Carbohydrate Esterase AT1G53830 30.286 2.02e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1176 - - gmx:100305537 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1176 4 11247614 11248641 Tpr4g1176 4 11247614 11248641 ECH