Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1175 ATGGAAGCAATTTCTTCAAAGATCCTTCTCATAATTTTTTCCTTTGGTTTAATCATACACTCTATCCAAGCAAATGAAAGACCATACCAACAATCCAACAAATTATTCATTAGAAATACATTATTCATTAGAAATTCTTGTCGCTCCACATCTTATCCAAGACTATGCTATGTCTCCCTATTGAAGCATGCTCATTTCATTCAAACAAATCACATGCTTTTAACGGGCGCGTCTCTAAATGTGACTCTTGCAGCGGCGAAATCAACTTCGGCTTTGATATCAACGCTCGCTAAAAGCCATGGGTTGAAGCCAAGAGAGGTTGCGGCTATGAAGGATTGTGTTGAAGTGCTAAGTGATTCTTTAGATGAACTCCGAAGGTCTATCAATGAAATGAGTCATATTAGGGCTTCAAATTTTGAGCTAACGATAAGCGATGTACAAACTTGGGTTAGTGCTGCTTTGACGGATCAGAGCACTTGTACCGACGGATTCGAAGAGATCAATTCCAAGGGCAATATTAAGACAATAGTGAGAAGGATAATTGTACAAGTAGCTCAAATGACTAGCAATGCTTTGGCTTTGATAAATAAACTTGCCACTTCTAAATAA 609 0.381 MEAISSKILLIIFSFGLIIHSIQANERPYQQSNKLFIRNTLFIRNSCRSTSYPRLCYVSLLKHAHFIQTNHMLLTGASLNVTLAAAKSTSALISTLAKSHGLKPREVAAMKDCVEVLSDSLDELRRSINEMSHIRASNFELTISDVQTWVSAALTDQSTCTDGFEEINSKGNIKTIVRRIIVQVAQMTSNALALINKLATSK* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1175 202 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 200 IPR035513 -
Tpr4g1175 202 PANTHER PECTINESTERASE INHIBITOR 10 5 200 - -
Tpr4g1175 202 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 200 - -
Tpr4g1175 202 TIGRFAM PME_inhib: pectinesterase inhibitor domain 38 198 IPR006501 GO:0004857
Tpr4g1175 202 CDD PMEI-like_3 46 200 - -
Tpr4g1175 202 Pfam Plant invertase/pectin methylesterase inhibitor 42 194 IPR006501 GO:0004857
Tpr4g1175 202 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 198 IPR035513 -
Tpr4g1175 202 SMART PMEI_2 38 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1175 Tpr-Chr4 11236705 11237586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1175 43 198 Carbohydrate Esterase AT1G53830 32.911 3.11e-22 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1175 - - gmx:100802601 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1175 4 11236705 11237586 Tpr4g1175 4 11236705 11237586 ECH