Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1174 ATGGCATTGCAATTGCATACTCTTATTGAATGTTCAATAAGTCACCATAATCTCTTCAAAATAATTTTTTACTTTCTATTCATCTCAACTCTTATTCACTCTACAACATCTACATCCAATTGCACCAAAGATTCCACTTCAACAATTTACAAAAAGTTTTTAAAGACTCAATGTAATTCAACCACATACCCAAATGTTTGCTACAAGTCACTTTCTCCATACACATCAAAAATCAAAACAAACTCTTTAACACTCACCAAAATATCTATCTATCTAGCCCTAAAATCAGCAAGAAGTGCATCAATGACATTGAAAAGACTAAGTTCTAAGAAGCTAACACATGCCGAAACATTGGTCATTGCCGATTGTAGCGAAAATGTTGAAGACACGGTGGATTCACTTGAAGATTCGGCCGATGGACTTGTGCATTTGAATGGTACTACAACTAGTGATGAAAGGTTTCAATGGGATACTATAAAGACATGGATGAGTGCAGCTATAACTAATGAGGGAACATGTACGGATGAATTTGATGAAATGGAAGTGAGGTCTTCAATAAAGAAAATGATCAAAACAAGTGTTGGTAATCTTCTTTTCATGACTAGCAATGCTTTGGCTTTTGTAAACAGGCTTTCCTTCTAG 642 0.3489 MALQLHTLIECSISHHNLFKIIFYFLFISTLIHSTTSTSNCTKDSTSTIYKKFLKTQCNSTTYPNVCYKSLSPYTSKIKTNSLTLTKISIYLALKSARSASMTLKRLSSKKLTHAETLVIADCSENVEDTVDSLEDSADGLVHLNGTTTSDERFQWDTIKTWMSAAITNEGTCTDEFDEMEVRSSIKKMIKTSVGNLLFMTSNALAFVNRLSF* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1174 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 211 - -
Tpr4g1174 213 CDD PMEI-like_3 58 212 - -
Tpr4g1174 213 TIGRFAM PME_inhib: pectinesterase inhibitor domain 23 211 IPR006501 GO:0004857
Tpr4g1174 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 212 IPR035513 -
Tpr4g1174 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 211 IPR035513 -
Tpr4g1174 213 SMART PMEI_2 49 207 IPR006501 GO:0004857
Tpr4g1174 213 Pfam Plant invertase/pectin methylesterase inhibitor 53 206 IPR006501 GO:0004857
Tpr4g1174 213 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 11 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1174 Tpr-Chr4 11227865 11228897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1174 32 212 Carbohydrate Esterase AT1G53830 28.649 3.21e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1174 - - cam:101501841 327.02