Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1171 ATGTCGTCGGAAAACGATCCATTTCACCCGACGCCGTCTCCGGCATCATCCAAATCAAACAAACTTCAGAAAACCCCTCACATTCTGAATCGACGAACCGCATCATCATCCAACAATGAAATCATCGTCGACGAAGGCGGCGAAGAAGAGAAGAATAAGAATAAGAACAAGTATAAGGTTCAGGTTCAGGAAGAAGAAGATGAAGAAGACGTTGTTTTTGTACCTCAACGTCAATTAGAACGCGCTGAATCTTCTTATTCTTCTTCCATTTTGCAAGCTTCTTCGTTAGGTCTTAATCAAATTCGAACGCGATTCTCTTCGCCTCTTCGTCATTCTTCTTCTGCAGGTGCTCCTTCTTTCGCCGGTGTTCCTGTCAATATCAACAATGTCGCTAAATCTAGATCCAAATATTCATATCCGAAAGACCTAGGGGAAAAGGTTCATTGGAATTCGAAATCGTTGAAAGCTTATTCACAACGCCTCCCTGTGTTGGAGGGTAACAATGCAGCTTTGGCCAAAGAAATACAATCCCCACGTTTTCAGGAAATCCTTCGACTTACGAGTCAAAATAAAAGAAACCGTGATATTAAAAGCTTTTCTCATGAACTCAACTCCAGAGGAGTTAGGCCTTATCCAACGTGGAAACATCGTGATCGTGGGCATATGGAGGAAGTCATGGTGGCGATTAAAGCTAAGTTTGAAAAACTAAAGGAAGAAGTTGATATTGATTTGGGTGTTTTTGCTGGTGATTTGGTGGGTACTCTTGAAAAAATATCTGGGTCTCACTGTGAATGGAAAGAGGGGTTGGAAGATTTGTTGGTTGTTGCCCGACAATGTGCAAAGATGTCACCTGCTGAGTTTTGGATCAAATGTGAAACTATTGTTCAAAAACTAGACGATAAACGTCAAGAAATACCAGTTGGGATCCTCAAACAAGCTCATACACGCCTGCTGTTTATTCTCTCCAGGTGCACTCGTCTTGTGCAATTCCAGAAGGAAAGTGGTTGTGAACAAGAGCACGTTCTTGCTCAACACCAACTCAGCGATCTTGGAGTATATCCAGAGATAATTGCAAAGGCTGCAGAGAATTGCAATCTTCCACCTAGTGCACTTGAGATAGCGGAGCAGATAAAAAAGTCACATGGAAAAGAGCAAGAAGAATTTATAACAAAACAAAGTCAAGCTGACCAAGATGCAAGTGTTGTTATTGACAATGTAGAGGTTAATACAGCTAAAAGTACTGAGTCAACTCCTGGCAGTTATAAGATGTCTTCTTGGAGAAGGTTTCCATCTGCTGCTGAGAAAACCCGCGTAGGTCAAGAGGTGGTGAAAGATGAAAATGCTGAACACTTGGATACATCGTCGTGTCATCGTGAACATTCTCAGACGTCATCTAGGACGCGAAAACTTTCTTGGGGATACTGGGGAGATCAGCAAAATCTACCATATGATTATTCAAATTCAAATATGATCTGCAGGATTTGTGAGGTTGAAATACCAATCATAAGTGTGGAGGAGCATTCTCGAATATGCACAATTGCTGATAAATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTTGAAAGAGTTTCTGAAACTATTGAAAGGTTACTTGAATCCTGGACACCAAAAAGCACACCTAAAAGCACTGATACTCATGGAGAAAGCTTCGAGGTTGCGAGAGTGTCAACATCAAGTTTGCACGAAGAGTTCAATGAGTTATCTCTAGAAAGAAATAACTTGTCTCATAGATGCTCCGAAGACATGCTTTACCCTGCTCATGAACGTGATAATAGTTTTGTTGTGGATGATCTAAACCTTTCACCCGAAATATCATGTGATACTCATATCTGCTGCAAACCTGATCATAGTGCAAATGTATCTTCACCTGGAAGCTTGACACCACGATCACCGTTGGTTACACCAAGAACAAGTCAAATAGAAATTTTACTAAGTGGAAGAAGACCAATATCTGAACTTGAGAGTTATGACCAGATAAACAAGCTAGTTGAAATTGCTCGTGCTGTTGCAAATGTGAACAACTGTGACTACAGTACTTTGGAGTATTTGCTTGATCGTGTGGAAGACCTGAAATACGTAATTCAGGACAGAAAAGAGGATGCACTTATTGTGGAGACTTTTGGTCGACGAATAGAGAAACTTTTGCTGGAGAAATATGCTACCCTTTGTGGACAAATAGAAGATGAAAGGGTAGACTCATCAAATAGCATGGCTGATGAAGAGAGTTCAGTGGAAGAGGATACAGTCCGTAGCCTTCGTTGTAGCCCAATGAATCCTTGTTCTAAGGACAGGACATCTATTGAAGATTTTGAAATAATAAAACCAATAAGCAGGGGTGCATTTGGACGAGTTTTTCTTGCCAGAAAAAGAGCGACTGGTGATTTATTTGCTATTAAGGTTCTGAAAAAGGCAGATATGATTCGTAAAAATCAAGTTAAAGGTATTTTGGTTGAGCGAGACATCCTTATATCTATTCGAAACCCTTTTGTGGTACGATTTTTCTATTCGTTCACATGTAGAGAAAATCTTTATTTGGTTATGGAGTATTTGAATGGTGGAGATCTCTATTCTTTGTTGAGAAACCTGGGTTGCTTAGATGAAGATATGGCTCGTGTATATATTGCAGAACTTGTTCTTGCGTTGGAGTATTTGCATGCCAACAGTATTATTCACAGAGACTTGAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAATTGACAGACTTTGGACTCTCAAAAGTTGGTCTCATCAATAGCACGGATGATTTATCAGCACCCTCATCTTTCACTAACGGTTTTTTAGGCGATGATGAACAAAAACCTCCACATGTTCCGAAAAGGGAAGCACGTCAACAACAAGGAGTAGTTGGCACTCCTGATTATTTGGCACCCGAAATACTTCTGGGCATGGGACATGGTGCAACTGCAGATTGGTGGTCGGTGGGTGTCATACTTTATGAGCTTCTTGTGGGTATTCCACCTTTTAATGCAGAACATCCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCAAAGTATCCTGAGGAGATCAGCTTTGAAGCATACGACTTGATGAATAAATTATTGAACGAAAACCCAGTACAAAGATTAGGTGCAACAGGAGCTACGGAAGTTAAAGGCCATGCTTTCTTCAAGGATATTAACTGGGATACGCTGGCAATGCAGAAGGCTATGTTCATACCATCGGCTGCTGAATCTCAAGATACAAGTTATTTTGAGAGCCGCTACATTTGGAATCCAGAGGATGAACATTGTGCTGGAGCTAGTGATTTTGATGACATTACCGAATCATGCAGCAGTGGTTCAGGAAGCGGCGATTCATTAGATGAAGATGGTGATGTCTGCGGGAGTTTAAAAGGAGGGTTCAACAATGGTCCACCTCAAAATCTTGAGGTGCAGTACTCGTTTAGTAACTTCTCATTTAAGAATTTATCTCAGCTAGTGACTATAAATTTTGATATGATGCATAAGAACTCCAAAGATTCACCCAATGACTCCAACCCATCTGTTCCACCATGA 3585 0.4056 MSSENDPFHPTPSPASSKSNKLQKTPHILNRRTASSSNNEIIVDEGGEEEKNKNKNKYKVQVQEEEDEEDVVFVPQRQLERAESSYSSSILQASSLGLNQIRTRFSSPLRHSSSAGAPSFAGVPVNINNVAKSRSKYSYPKDLGEKVHWNSKSLKAYSQRLPVLEGNNAALAKEIQSPRFQEILRLTSQNKRNRDIKSFSHELNSRGVRPYPTWKHRDRGHMEEVMVAIKAKFEKLKEEVDIDLGVFAGDLVGTLEKISGSHCEWKEGLEDLLVVARQCAKMSPAEFWIKCETIVQKLDDKRQEIPVGILKQAHTRLLFILSRCTRLVQFQKESGCEQEHVLAQHQLSDLGVYPEIIAKAAENCNLPPSALEIAEQIKKSHGKEQEEFITKQSQADQDASVVIDNVEVNTAKSTESTPGSYKMSSWRRFPSAAEKTRVGQEVVKDENAEHLDTSSCHREHSQTSSRTRKLSWGYWGDQQNLPYDYSNSNMICRICEVEIPIISVEEHSRICTIADKCDLKGLTVNERLERVSETIERLLESWTPKSTPKSTDTHGESFEVARVSTSSLHEEFNELSLERNNLSHRCSEDMLYPAHERDNSFVVDDLNLSPEISCDTHICCKPDHSANVSSPGSLTPRSPLVTPRTSQIEILLSGRRPISELESYDQINKLVEIARAVANVNNCDYSTLEYLLDRVEDLKYVIQDRKEDALIVETFGRRIEKLLLEKYATLCGQIEDERVDSSNSMADEESSVEEDTVRSLRCSPMNPCSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNQVKGILVERDILISIRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHANSIIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSSFTNGFLGDDEQKPPHVPKREARQQQGVVGTPDYLAPEILLGMGHGATADWWSVGVILYELLVGIPPFNAEHPQQIFDNIINRDIQWPKYPEEISFEAYDLMNKLLNENPVQRLGATGATEVKGHAFFKDINWDTLAMQKAMFIPSAAESQDTSYFESRYIWNPEDEHCAGASDFDDITESCSSGSGSGDSLDEDGDVCGSLKGGFNNGPPQNLEVQYSFSNFSFKNLSQLVTINFDMMHKNSKDSPNDSNPSVPP* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1171 1194 MobiDBLite consensus disorder prediction 1 72 - -
Tpr4g1171 1194 MobiDBLite consensus disorder prediction 1 42 - -
Tpr4g1171 1194 MobiDBLite consensus disorder prediction 44 64 - -
Tpr4g1171 1194 ProSitePatterns Serine/Threonine protein kinases active-site signature. 897 909 IPR008271 GO:0004672|GO:0006468
Tpr4g1171 1194 Pfam Protein kinase domain 778 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1171 1194 ProSiteProfiles AGC-kinase C-terminal domain profile. 1067 1173 IPR000961 GO:0004674|GO:0005524|GO:0006468
Tpr4g1171 1194 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 1193 - -
Tpr4g1171 1194 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 18 1193 - -
Tpr4g1171 1194 Coils Coil 48 68 - -
Tpr4g1171 1194 SMART serkin_6 778 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1171 1194 ProSiteProfiles Protein kinase domain profile. 778 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1171 1194 Gene3D Phosphorylase Kinase; domain 1 776 1095 - -
Tpr4g1171 1194 SUPERFAMILY Protein kinase-like (PK-like) 775 1094 IPR011009 -
Tpr4g1171 1194 Gene3D Transferase(Phosphotransferase) domain 1 862 1084 - -
Tpr4g1171 1194 CDD STKc_MAST_like 784 1071 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1171 Tpr-Chr4 11205827 11215228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1171 87 1193 AGC Kinase Gene Family AT5G62310 62.282 0.0 1363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Tpr4g1171 Pkinase 4.3e-63 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1171 4 11205827 11215228 Tpr4g1171 4 11205827 11215228 ECH