Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1164 ATGAGTTCTTCTAATGGTGGTGTGCCACCGGGGTTTCGATTTCATCCAACCGATGAAGAGCTACTTCATTATTACTTGAAGAAGAAGGTTGCATTTCAAAAATTTGATATGGATGTTATTAGAGAGGTGGATTTGAACAAGATGGAGCCTTGGGACTTGCAAGAAAAATGTAAGATTGGATCAACACCACAAAACGAGTGGTACTTTTTCAGTCACAAGGACAGAAAATACCCAACAGGGTCAAGGACTAATAGAGCAACAAATGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAATGCATTAGAAATACTTACAAGAAGATTGGAATGAGAAAGACTCTTGTGTTTTACAAAGGTAGAGCTCCTCATGGACAAAAAACTGATTGGATTATGCATGAATATCGCCTTGAAGATGGCAATGATCCTACTAATGAAGATGGTTGGGTAGTATGCAGGGTATTCAAGAAGAAGAACTTATTCAAGATAGGAAGTGAAGGTGGATCCACACACAATCAAGATCAACAAATGAACAACATTTCATCCACCAATCATCGCTCCTTCATGCAAAGAGAAAACCAATACTTACTACATCAACACCAACATCAAAACCACCCTAGGAACCTATCCGGTTTCGAGCTCGAAAAACCCGAGCTCGGTCTACATTATCAACATTTGCAAAACTCCCAATACTCACTCTTCCACTCCCAAACCCAACCTCAACCTCTACAAGTTAACTTTGATTACTCATATGCATCATCTTTACAATCAGATCAACCTATTACAGTTAAACAACTTATGACAAACCCTAGAGATTGTGAGAGTGGTAGTGATGGTTTGAGATACCAAGTTTCAGAATCTGGTATTGAAGTTGGTTCATGTGAACCACCTCAAGAAATGGGTGTTGGAAGGAGTGAAGGAATGAATGAATGGGGTATGCTTGATAGGCTAGTGAATGAAGACTCAACAAAAGAGGCCACTAGGTTTGAGGATGCTAATCCTCATCAAATCAATCAACTATCATTGAGGGGAGAGATGGATTTTTGGGGTTATGGAAAACAATGA 1062 0.3955 MSSSNGGVPPGFRFHPTDEELLHYYLKKKVAFQKFDMDVIREVDLNKMEPWDLQEKCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDGNDPTNEDGWVVCRVFKKKNLFKIGSEGGSTHNQDQQMNNISSTNHRSFMQRENQYLLHQHQHQNHPRNLSGFELEKPELGLHYQHLQNSQYSLFHSQTQPQPLQVNFDYSYASSLQSDQPITVKQLMTNPRDCESGSDGLRYQVSESGIEVGSCEPPQEMGVGRSEGMNEWGMLDRLVNEDSTKEATRFEDANPHQINQLSLRGEMDFWGYGKQ* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1164 353 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 257 - -
Tpr4g1164 353 ProSiteProfiles NAC domain profile. 8 156 IPR003441 GO:0003677|GO:0006355
Tpr4g1164 353 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Tpr4g1164 353 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Tpr4g1164 353 PANTHER PROTEIN BEARSKIN2-LIKE 5 257 IPR033519 -
Tpr4g1164 353 SUPERFAMILY NAC domain 7 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1164 Tpr-Chr4 11142990 11146417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1164 1 349 NAC Transcription Factor Family AT1G33280 54.875 4.21e-126 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr4g1164 NAM 1.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1164 - - gmx:100804181 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1164 4 11142990 11146417 Tpr4g1164 4 11142990 11146417 ECH