Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1152 ATGACCACAACAATGGCTAAGATTTCCAATAATCCCTTTCAAATTTCCAACTTCATAGCAATTCTATTACTCACATCATACTATATTTTCCCTCCATGTTTGTCTCTAACAATTGAAACACAAGCACTTCTTGATTTCAAAAACCATTTGAAAGACTCATTGAATACTTTAGCTTCATGGAATGAGTCAAACTCTCCATGCATCTTTCATGGAATTACATGTGATCCATTATCTTTCAAAGTCATAGAAATCTCATTGGAAGATAACTCCCTCTCTGGCGAAATTTTTTCGTCAATCTCACTTCTTCATAGCTTGCAAGTTCTTTCATTACCATCCAATTCCATTTCCGGAAAAATTCCATCCGAAGTAACCAAATTCATAAACCTCAAAGTCTTGAATCTATCAGGAAATGAGCTTGTTGGTGCAATTCCAGATATGTCTGGATTGAGAAACCTTCAAGTTCTTGATCTTTCAGCGAATTACTTTTCTGGTCGAATCCCTAGTTGGATAGGGAAGCTCACTGGACTAGTTTCACTTGGTCTTGGAGAAAATCTTTACACCGAGAGTGTGATACCCGAGAGTCTTGGAAATTTGAAGAACTTAACTTGGCTTTATCTACGCGGTTCTCATTTGACAGGAGAGATTCCAGAATCAATATATGAAATGGAAGCATTGGAGACTTTAGATATTTCAAGAAACAGGTTAACTGGCAAAATCTCAAGATCAATTTCAAAGCTGAAAAATGTTTACAAGATTGAGTTGTTTTCAAATAATTTGGTAGGCGAAATACCAGAAGAACTTGCGAATTTAACAAATTTGCAAGAGATTGATCTTTCTGCAAACAAAATGTCTGGTATATTGCCTAAGCAAATTGGTGATATGAAGAATTTGGTTGTTTTTCAACTCTATGATAACAACTTTTCTGGTGAAATTCCTGATGGATTTGGTGATATGGAAAATCTAAAAGGTTTTTCAGTTTACAGAAACACGTTCAACGGAACGATACCAGAGAATTTTGGTCGATTTTCCCCACTCGAAAGTATTGACATATCAGAGAATCAATTTTCAGGTTTTTTTCCAAAGTACTTGTGTGAAAAAAGAAAGTTGAAATTTTTGCTTGCATTGCAAAACAATTTCTTTGGAAATTTTTCTGAATCTTATGCTTCATGCAAATCACTTGTAAGATTAAGGATTAGTAGGAATTTTTTATCAGGAAAAATTCCGAAAGGTGTTTGGTCACTTCCTAATGCAAAAATAATTGATTTAGGCTTTAACAATTTCAGTGGTGAAGTATCTTCAGAAATTGGAAATTCATCAGCTTTAACTGAAATTGTTTTGATGAATAACAAGTTTTCAGGTAAGGTTCCTTCACAAATTAAAAAATTGGTGAATTTGGAGAAACTTTACTTGAGTAACAATAATTTCACCGGAGAAATTCCACATGAAATTGGATTTTTAAAGCAATTATCCACTTTGCATTTGGAAGAAAATTCATTAAATGGCTTAATACCTAGTGAATTAGGTCGTTGTTCGAGGCTGGTGGATTTGAATCTTGCTAGGAATAATTTATCAGGAAATATTCCAAATTCGTTTTCGCTTATGAGTTCTTTGAATTCTTTGAATTTGTCAAGAAACCAACTTACAGGTTCAATTCCAGGAAATTTAGAGAAAATGAAACTAAGCTCAGTGGATTTTTCTGAAAATTTTCTTTCTGGTAGAATTCCATTTTGGATTTTTATCATTGGTGGAGAAAAGGCTTTTGTTGGAAACAAAGATTTGTGTGTTGAGAAAAATCCGAAAGCTTCAACGAATTCTGGTTTGAAGATTTGTGATAAAGATAATGGTCATAGAAGACCTATCTTTCATTATAAATATCTCATGCTCTTTTTCATTGCTGTTATATTCGGCGCTGTGGTTTTGATTGGTAGATACGTTAAGAATCGAAGAGGAAAAAAGTTACAAAATGGTCCAAAGGAAGGACGTGAAAAATGGAAACTAGCATCTTTCCACCAAGTGGACATTGACGCCGATGAAATAAGTCATTTGAAAGAAGATAATCTAATCGGCTACGGTGGTGCAGGAAAGGTTTATCGAGTCCAGTTGAGGAAAAACGGTGGAGTGGTGGCTGTGAAGCAACTAGAGAAAGGGAACAATGTGAGGATTTTGGCAGCAGAAATCGAGATTTTAGGGAAAATTAGACATAAAAATATACTTAAACTTTATGCTTGTTTTCTCAAAGGAGAAACCAGTCTTTTAGTTTACGAGTATATGCCAAATGGTAATCTTTTTCAAGCTCTTCATCGAGAGACAAAAGACGAGAAGGTTACATTTGATTGGAATCAAAGGTATAAAATTGCGTTGGGAGGAGCGAAAGGGATTTGCTATTTGCACCATGATTGTTCTCCACCTGTTATTCATAGGGATATAAAATCTAGCAACATTTTGCTTGATGAAAATTATGAAGCAAAAATTGCTGATTTTGGTGTTGCAAGGTTTGCAGAAAAATCTCAGATGGATGATAGCTCTTTTGCTGGCACACATGGTTATATTGCTCCAGAACTGGCTTATACAACTGAAATAACCGAAAAGTGTGATGTGTACAGCTTCGGAATTGTACTATTAGAGTTAGTATCTGGTCGTGAAGCTGTTGAAGAGGAATACGGTGAAGCAAAAGATATTGTTTATTGGGTTTTGACTAATCTTCATGACCGTAAAAGTGTACTCAACATTCTTGACGATAGAGTTGCATCAAAACACTGTGTTGATGATATGATAAAAGTGTTGAAGATCGCTATTAAGTGCACTACTAAGCTTCCAACTTTGCGTCCTACAATGCGAGATGTTGTTAAGATGCTTATTGATTCTGAACCTTGCAAGATGAAATCTAAAGGATGTGGTCTTGAGAAAGATTAG 2913 0.3491 MTTTMAKISNNPFQISNFIAILLLTSYYIFPPCLSLTIETQALLDFKNHLKDSLNTLASWNESNSPCIFHGITCDPLSFKVIEISLEDNSLSGEIFSSISLLHSLQVLSLPSNSISGKIPSEVTKFINLKVLNLSGNELVGAIPDMSGLRNLQVLDLSANYFSGRIPSWIGKLTGLVSLGLGENLYTESVIPESLGNLKNLTWLYLRGSHLTGEIPESIYEMEALETLDISRNRLTGKISRSISKLKNVYKIELFSNNLVGEIPEELANLTNLQEIDLSANKMSGILPKQIGDMKNLVVFQLYDNNFSGEIPDGFGDMENLKGFSVYRNTFNGTIPENFGRFSPLESIDISENQFSGFFPKYLCEKRKLKFLLALQNNFFGNFSESYASCKSLVRLRISRNFLSGKIPKGVWSLPNAKIIDLGFNNFSGEVSSEIGNSSALTEIVLMNNKFSGKVPSQIKKLVNLEKLYLSNNNFTGEIPHEIGFLKQLSTLHLEENSLNGLIPSELGRCSRLVDLNLARNNLSGNIPNSFSLMSSLNSLNLSRNQLTGSIPGNLEKMKLSSVDFSENFLSGRIPFWIFIIGGEKAFVGNKDLCVEKNPKASTNSGLKICDKDNGHRRPIFHYKYLMLFFIAVIFGAVVLIGRYVKNRRGKKLQNGPKEGREKWKLASFHQVDIDADEISHLKEDNLIGYGGAGKVYRVQLRKNGGVVAVKQLEKGNNVRILAAEIEILGKIRHKNILKLYACFLKGETSLLVYEYMPNGNLFQALHRETKDEKVTFDWNQRYKIALGGAKGICYLHHDCSPPVIHRDIKSSNILLDENYEAKIADFGVARFAEKSQMDDSSFAGTHGYIAPELAYTTEITEKCDVYSFGIVLLELVSGREAVEEEYGEAKDIVYWVLTNLHDRKSVLNILDDRVASKHCVDDMIKVLKIAIKCTTKLPTLRPTMRDVVKMLIDSEPCKMKSKGCGLEKD* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1152 970 Pfam Leucine rich repeat 440 499 IPR001611 GO:0005515
Tpr4g1152 970 Pfam Leucine rich repeat 150 211 IPR001611 GO:0005515
Tpr4g1152 970 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 17 963 - -
Tpr4g1152 970 SUPERFAMILY L domain-like 71 334 - -
Tpr4g1152 970 Pfam Leucine Rich Repeat 225 246 IPR001611 GO:0005515
Tpr4g1152 970 Gene3D Transferase(Phosphotransferase) domain 1 757 963 - -
Tpr4g1152 970 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR2 17 963 - -
Tpr4g1152 970 SMART LRR_typ_2 149 173 IPR003591 -
Tpr4g1152 970 SMART LRR_typ_2 198 222 IPR003591 -
Tpr4g1152 970 SMART LRR_typ_2 462 484 IPR003591 -
Tpr4g1152 970 SMART LRR_typ_2 534 558 IPR003591 -
Tpr4g1152 970 SMART LRR_typ_2 102 126 IPR003591 -
Tpr4g1152 970 SMART LRR_typ_2 486 510 IPR003591 -
Tpr4g1152 970 SMART LRR_typ_2 270 293 IPR003591 -
Tpr4g1152 970 Pfam Leucine rich repeat N-terminal domain 39 75 IPR013210 -
Tpr4g1152 970 SMART serkin_6 682 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1152 970 ProSiteProfiles Leucine-rich repeat profile. 128 150 IPR001611 GO:0005515
Tpr4g1152 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Tpr4g1152 970 Gene3D Ribonuclease Inhibitor 189 245 IPR032675 -
Tpr4g1152 970 Gene3D Ribonuclease Inhibitor 246 317 IPR032675 -
Tpr4g1152 970 Gene3D Phosphorylase Kinase; domain 1 657 756 - -
Tpr4g1152 970 Gene3D Ribonuclease Inhibitor 36 188 IPR032675 -
Tpr4g1152 970 Gene3D Ribonuclease Inhibitor 318 605 IPR032675 -
Tpr4g1152 970 SUPERFAMILY RNI-like 252 576 - -
Tpr4g1152 970 ProSiteProfiles Protein kinase domain profile. 682 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1152 970 SUPERFAMILY Protein kinase-like (PK-like) 678 952 IPR011009 -
Tpr4g1152 970 Pfam Protein kinase domain 684 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1152 Tpr-Chr4 11010509 11014937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1152 15 963 Receptor kinase-like Gene Family AT1G72180 53.590 0.0 1002
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr4g1152 Pkinase 6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1152 - - cam:101508379 1388.24