Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1151 ATGGCTTTTCATCATAAACACTTGTTTATTTCTTTATTTTTTTTCCTTTCTTTTATTCTTCCTATCATAAACACACTTTCAACTGTTTCAATTTCTCAATCTTCAAATTCAAATCAAACATTAATTTGTGTCTTAAAACCTCAAAACAAACAAAAACATTCAAATCTTAATTGTACTAGTTTTCCTCCTAGTACTATTAAACTTGATATAAATCCTAATGTTTCATTTTCTCAAATTGTTGGTGGAAATGGTTTTTTATGTGCATTAACATCATCATCAAATTCTTCAAATTCAATCATGGGTTGTTGGAGATTCTCACTCTCTTCAAATTCCACTACTAATATTCCCTTTAAACGAATCTACCGTGGTCCCTTTATCAAAGACATTTACGCGGGAAATTCCCACGTCTGCGGTCTGATTAAAGGGACCAACGGTTTTCGCCCTGAGTGTTGGCAATGGAAAGGTTTCAATTCAACAAACCCGAACATGACGATGAACAACATGTCAAGTATGGCGATGGGGGAGAATTTTGCATGTGGGCTATTAGAAAATGAAAAAGGGAATAATGTTACTTGCATAGGAAGTAACAAAAAAGTTGTTGATGAACCAAAGAATGGTAGAGATTATTCTTTAATTGAAGCTGGTTCAAATCATGTTTGTGCTATCACAAATGATGGTAGTTTGGATTGTTGGGGTGATATGGTTGGTGAGAAACCAAAAGGAAGATTCATTTCATTGGCTTTAGGAGAGAATAGAAGTTGTGCACTTGGGTATGATGGATTAATCACTTGTTGGGGTTTGAATAATTTCACCTTGCCATTGAGATTAAGAGAGACTTATTTTGAGTCAATTGTGGCTAAAAAAAGTGTTTTTTGTGGTGTTTTGACTTCTAATTATTCTTTGTTTTGTTGGGGTAATGAAAATTTTGAGTCAAAAAAAGATGCATTCAAGGTGTTTGATAATGTGCTTCCTGGACCTTGTAAGAATCAATGTCCATGTGGACCTTTACCAGATTCTGCTAAACTTTGTGTCTCACCAGCCATCATTTGTAAACCTTGTTTACCATCGTTTGAAATTCTATCATCACCACCGTTGAATCCTCCGTCGGGAAGTCCCGGAAATTCATCGAAAACTGGTACTTGGAGCAACAAAATGGTGGCGTTTCTAGTAATAGGATGTGTTGGTTGTAGTATTTTGTTACTAGCCTTATCTTTCTTCTTTTACAAATACTGCAGAGGGACAATATGCAGATCTAAATCTAGAGTTCATGACTCTGGAAGATTAGACGATCTTGATCAAGAAACCGAATTGGAGCCTCGAGCTAACCCTGCGGTTCTCGAGAAGAGGTTAAGCCATGTAATCAGCAAGGGAAATGGAGGTAGCCTTTTGGAGGAATTTTCAATTCAAACACTAATTGAAGCCACCGGAAATTTCTCCGAAGAGAACAAAATTGGTGTTGGAAGCTTCGGTTCGGTGTACCGTGCTAAACTTGAAGATGGAAAAGAAGTTGCTATAAAAAGAGCTGAAATGTCAACAAATTCACCTTTATTTGGAAATGTTAGTGTCACCAAAAGACAAGAAGACAATGACAGTGCTTTTGTGAATGAACTTGAATCTTTATCAAGACTCCACCACAAAAACTTGGTAAAATTACTCGGTTTCTACGAAGACAAAAACGAGAGAATCCTAGTATACGAATACATGAACAACGGAAGCTTAAACGATCATCTTCATAAGTTTCAAACTTCAACTATTATGTCATGGAGCGGTCGTATAAAAGTTGCATTAGACGCAGCTAGAGGTATAGAATATTTACACAAATACGCCATGCCACCAATTATTCACCGTGACATTAAAACGTCAAACATTTTATTAGATTCAAAAGGTGTCGCTAAAGTAGCCGATTTCGGATTATCATTAATGGGTCCAGAAGACGAAGAGTCACATATTTCACTTCTAGCAGCCGGAACCGTTGGCTACATGGATCCCGAATACTACAGGCTACAACATTTGACGACAAAAAGTGACGTGTATAGTTTCGGCGTTGTCTTGTTAGAACTTTTAAGTGGCTATAAAGCTATACATAAAAATGAAAATGGAGTGCCAAGAAATGTGGTTGATTTTGTTGTACCTTTTATTGTTCAAGATGAGATTCATAGAATTTTGGATCCAAAATTGCCACCACCAACACCATTTGAGATTGAAGGTGTGGCTTTTGTAGGTTATTTAGCTTGTGATTGTGTTCGTTTAGAAGGTAGAGATAGACCAAGCATGAGTCATGTTGTGAATAGTTTAGAGAAAGCACTAGAGGCTTGTTTGGCACAACCAATAAATTGTGAGTCCGATAGGAGCACTACTAGCACTGTTTCTAATGAGTGA 2379 0.3674 MAFHHKHLFISLFFFLSFILPIINTLSTVSISQSSNSNQTLICVLKPQNKQKHSNLNCTSFPPSTIKLDINPNVSFSQIVGGNGFLCALTSSSNSSNSIMGCWRFSLSSNSTTNIPFKRIYRGPFIKDIYAGNSHVCGLIKGTNGFRPECWQWKGFNSTNPNMTMNNMSSMAMGENFACGLLENEKGNNVTCIGSNKKVVDEPKNGRDYSLIEAGSNHVCAITNDGSLDCWGDMVGEKPKGRFISLALGENRSCALGYDGLITCWGLNNFTLPLRLRETYFESIVAKKSVFCGVLTSNYSLFCWGNENFESKKDAFKVFDNVLPGPCKNQCPCGPLPDSAKLCVSPAIICKPCLPSFEILSSPPLNPPSGSPGNSSKTGTWSNKMVAFLVIGCVGCSILLLALSFFFYKYCRGTICRSKSRVHDSGRLDDLDQETELEPRANPAVLEKRLSHVISKGNGGSLLEEFSIQTLIEATGNFSEENKIGVGSFGSVYRAKLEDGKEVAIKRAEMSTNSPLFGNVSVTKRQEDNDSAFVNELESLSRLHHKNLVKLLGFYEDKNERILVYEYMNNGSLNDHLHKFQTSTIMSWSGRIKVALDAARGIEYLHKYAMPPIIHRDIKTSNILLDSKGVAKVADFGLSLMGPEDEESHISLLAAGTVGYMDPEYYRLQHLTTKSDVYSFGVVLLELLSGYKAIHKNENGVPRNVVDFVVPFIVQDEIHRILDPKLPPPTPFEIEGVAFVGYLACDCVRLEGRDRPSMSHVVNSLEKALEACLAQPINCESDRSTTSTVSNE* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1151 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Tpr4g1151 792 SUPERFAMILY Protein kinase-like (PK-like) 461 765 IPR011009 -
Tpr4g1151 792 SMART serkin_6 478 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1151 792 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 23 786 IPR044815 GO:0004674
Tpr4g1151 792 CDD STKc_IRAK 484 767 - -
Tpr4g1151 792 Pfam Regulator of chromosome condensation (RCC1) repeat 212 233 - -
Tpr4g1151 792 Gene3D Transferase(Phosphotransferase) domain 1 568 785 - -
Tpr4g1151 792 SUPERFAMILY RCC1/BLIP-II 70 308 IPR009091 -
Tpr4g1151 792 Gene3D - 64 339 IPR009091 -
Tpr4g1151 792 Gene3D Phosphorylase Kinase; domain 1 446 567 - -
Tpr4g1151 792 ProSitePatterns Protein kinases ATP-binding region signature. 484 506 IPR017441 GO:0005524
Tpr4g1151 792 PANTHER OJ000114_01.11 PROTEIN 23 786 - -
Tpr4g1151 792 ProSiteProfiles Protein kinase domain profile. 478 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1151 792 Pfam Protein kinase domain 479 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1151 Tpr-Chr4 11005378 11007974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1151 25 786 Receptor kinase-like Gene Family AT5G47850 50.065 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Tpr4g1151 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1151 - - pvu:PHAVU_011G003100g 978.008