Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1130 ATGAATCTCAAGAGTAATGGCAATGAAGAAAATCATGTGTATCAAGCTCAAATCCATTTATTCAAACATATATACAGCTTTTTAAGTTCCATGGCACTCAAATCTGCAGTGGAGCTAGGTGTAATAGATGTAATCCACAAACATGGAAAGCCTATGACTCTTTCTGAATTAGTCTCATCTTTGAAACTCCACCCTTCTAAAGTTAGTGTCTTTTATCGCTTCATGCGATTGTTAACACACAATGGTTTCTTCGCGAAAACAACAGTGTTGAAAGCCAAAGAAGACGGAGACGATGAAGAAGATGAAGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACAACTTATGCACTCACACCTCCTTCAATGCTTCTCATCAATGGTGAGTCACCTTGTTTTACAACAATTATCAATGGACTTTTTCATCCATCAGTTATGGATATGTGGCACTCTTCTAAGAAATGGTTTGGAGAAGAGAATGAACAAGCACTCTATGAAAGTGCAAATGGTGAAACATTTTTTAACTTTCTTAACAAAGATTCTGAAGCATATATACTTGGTATGTTTCAAGAAGCCATGGCAGCTGATTCTCAAATGATGAAGTTTGCACTTAAGGATTGTAATCATGTGTTTGAGGGTTTGGAGTCTTTGGTTGATGTTGCTGGTGGAACTGGAGTTGTGTCAAAACTTATTCTTGAAGCATTTCCTCATATTAAATGCACTGTTTTAGATCAGCCACAAGTTGTGGCTAATTTATGTGGAACTCAAAATTTGAACTTTGTTGGTGGTGATATGTTCAAATCTATTCCTCCTGCAGATGCTGTTTTACTTAAGTGGGTTTTGCATGATTGGAATGATGAGCTCTGCTTAAAGATATTGAAGAACTGCAAAGAAGCTATTTCTGGAAAAGGGAAAAAAGGAAAGATAATAATCATTGATATATCAATTGATGAAACAAGTGAAGATCATGAATTAACCAAGCTGCAATTGAACTTTGACTTGGTAATGATGACTCTACATAATGGGAAAGAAAGAAACAAGAAAGAATGGAAGAAACTCCTATATGATGCTGGCTTCACCAATTACAAGATTACTCCCATATTTGGCTTCAAGTCTCTCATAGAAGTTTATCCTTAA 1140 0.357 MNLKSNGNEENHVYQAQIHLFKHIYSFLSSMALKSAVELGVIDVIHKHGKPMTLSELVSSLKLHPSKVSVFYRFMRLLTHNGFFAKTTVLKAKEDGDDEEDEEVEEEEEEEEEETTYALTPPSMLLINGESPCFTTIINGLFHPSVMDMWHSSKKWFGEENEQALYESANGETFFNFLNKDSEAYILGMFQEAMAADSQMMKFALKDCNHVFEGLESLVDVAGGTGVVSKLILEAFPHIKCTVLDQPQVVANLCGTQNLNFVGGDMFKSIPPADAVLLKWVLHDWNDELCLKILKNCKEAISGKGKKGKIIIIDISIDETSEDHELTKLQLNFDLVMMTLHNGKERNKKEWKKLLYDAGFTNYKITPIFGFKSLIEVYP* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1130 379 MobiDBLite consensus disorder prediction 93 117 - -
Tpr4g1130 379 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 5 379 - -
Tpr4g1130 379 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 378 IPR029063 -
Tpr4g1130 379 Pfam O-methyltransferase domain 150 360 IPR001077 GO:0008171
Tpr4g1130 379 MobiDBLite consensus disorder prediction 95 116 - -
Tpr4g1130 379 PANTHER O-METHYLTRANSFERASE 5 379 IPR016461 GO:0008168
Tpr4g1130 379 Gene3D Vaccinia Virus protein VP39 128 379 IPR029063 -
Tpr4g1130 379 Gene3D - 2 126 IPR036388 -
Tpr4g1130 379 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 379 IPR016461 GO:0008168
Tpr4g1130 379 SUPERFAMILY "Winged helix" DNA-binding domain 11 130 IPR036390 -
Tpr4g1130 379 PIRSF O-mtase 1 379 IPR016461 GO:0008168
Tpr4g1130 379 Coils Coil 90 110 - -
Tpr4g1130 379 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1130 Tpr-Chr4 10785609 10788232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1130 31 366 Monolignol Biosynthesis Gene Families AT5G54160 31.176 2.79e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1130 K22588 - gmx:100807589 500.36