Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1121 ATGAACTGTATCCTAAGATTTCCCAAAAATCTAACCATTCTTTTTTGTTCCATTCTCATGGCTTCCACAACAACACCTTCTCCACAGATTCTATTATTCAACCCAATCTTAGGAAACATCAAAACAATAAAAGGAGTAAGGTTTTTTAGGATAACAAAATCCACAAACTCTCACTATAGTTTACAAGTTCATGCTTCTAAGGACTCTCAAGGACCCCAAAAAGCACCATCTGGAGTTGACACAAGAATTCATTGGGAAAATGAAGATGAAGGTTGGATTGGAGGTAACACTAAACAGAAACAAACAAATGAAGATGTGAAACAACCTAAGAAGCTTTTGGGTGAAGATTTTGCTGATTTGCTTAGTTTTCAAGGTTCTCATTATGAATTCTTAGGAGTACCACCAGAGTCTAGTGCTGAAGAAATCAAAGTAGCATTCAGGAAACTATCAAAGGAATATCATCCAGACACAACTTCACTCCCTCTAAAAACAGCCTCAGAAAAATTCATGAAATTAAAAGAGGTTTACACTGTTCTCAGCAATGATGAAAGTAGAAGATTTTATGATTGGTCCCTAGCTCAAGAGGTTGCAAGTCGTCAACAAGAGAAATTGAAAATTAAATTTGAGGATCCTTATGAGGTAGAATTGATCAATTATGAACCTGTTCCAGATATGGTTGATAGACTTGGTGGAAAGAATATGAAGCTTAGTGATCAAGCTGTTTCTGCTATCACTATTGATGTTTTTATCATTATTTTTGCTATATGTTGTTTTACTTATGTAGTTTTATTTAAATAA 798 0.3434 MNCILRFPKNLTILFCSILMASTTTPSPQILLFNPILGNIKTIKGVRFFRITKSTNSHYSLQVHASKDSQGPQKAPSGVDTRIHWENEDEGWIGGNTKQKQTNEDVKQPKKLLGEDFADLLSFQGSHYEFLGVPPESSAEEIKVAFRKLSKEYHPDTTSLPLKTASEKFMKLKEVYTVLSNDESRRFYDWSLAQEVASRQQEKLKIKFEDPYEVELINYEPVPDMVDRLGGKNMKLSDQAVSAITIDVFIIIFAICCFTYVVLFK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1121 265 Pfam DnaJ domain 127 189 IPR001623 -
Tpr4g1121 265 PRINTS DnaJ domain signature 128 146 IPR001623 -
Tpr4g1121 265 PRINTS DnaJ domain signature 146 161 IPR001623 -
Tpr4g1121 265 PRINTS DnaJ domain signature 164 184 IPR001623 -
Tpr4g1121 265 SUPERFAMILY Chaperone J-domain 126 195 IPR036869 -
Tpr4g1121 265 SMART dnaj_3 125 184 IPR001623 -
Tpr4g1121 265 ProSiteProfiles dnaJ domain profile. 126 192 IPR001623 -
Tpr4g1121 265 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 48 265 IPR044618 -
Tpr4g1121 265 CDD DnaJ 127 181 IPR001623 -
Tpr4g1121 265 Gene3D DnaJ domain 120 212 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1121 Tpr-Chr4 10731882 10733702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1121 127 194 C2H2 Transcription Factor Family AT1G74250 37.500 3.15e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1121 K23051 - gmx:100819309 292.737