Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1090 ATGGCGAGCTTTGTGACTGATTTGGCGAAGCCATATGTAGAGAAATTGATAAATGGGGCGATTGCAGAATCAAGTTATATATGTTGCTTCACGTGCATTGCTAAGGATTTCGAAGAAGAAAAAATTAGGTTGGAAGTAGAAAGGAAAACTGTCAAGCAACGTGTTGACGTGGCAACCAGAAGAGGAGAAGATGTTCAAGGTAATGCTCTTTTTTGGGAAGAAGAAGCTGAAAAGCTCATTCAAGAAGACACCAGAACAACAAAAAAATGTTTTTTTGGATTTTGTTCCGATTGCATATGGCGATATAGAAGGGGAAAGGAACTTGCAAATAAGCAGAAGCAAATTAAGATATTGATGGAAACTGGAAAGGAACTTGCAATTGGGCTCCCAGCTCGTCTTCCAGATGTTGAGCGTTATTCATCCCAACACTATATTCCTTTCAAAAGCAGGGAATCCAAATACAAAGAGCTTTTGGATGCACTGACAGATGAGAACAATTATATAATCGGGTTGAAAGGGATGGGGGGGACGGGAAAAACTACATTGGCCAAAGCAATAGGTAAAGAACTCAAGCAGTCTGAACAATTTACGCATGTTATTGATACGACAGTGTCATGTTCTCCTGATATTAAAAAAATTCAAGATGATATTGCTGGACCCTTGGGATTGAAATTGGATGACTGTAGTGAATCTGACCGTCCCAAAAAATTATGGAGCAGATTAACCAAAGATGAGAAGATTCTTCTTATATTGGATGATGTGTGGGGAGATATTGATTTTGATGAAATAGGGATTCCATATAGTGACAATCACAAAGGCAGTAGAATTCTTGTAACCACACGCAATATGTTGGTTTGCAACAGATTATGCAGTAAGACAATCCAACTAGATCTCTTATCTGAAAAAGACGCATGGATCATGTTCAAAAGCTATGCTGGTCTAAGCGACAAATCAACTAAAAACTTGCTCGACAAGGGTCGTAAAATTGCAAACGAATGCAAAAGGTTACCAGTTGCAATTGCTGCTATCGCCAGTAGTTTGAAGGGCGAACAACGTCTGGAAGAGTGGGATGCGGCCTTAAACTCCTTGCAGAAACATATGCCCATGCACGGTGTTGATGCTGAACTGGTTAAAATTTATAAATGCTTGAAGTTTAGCTACGATAATTTGAAGAATGAAAAGGCCAAGAGAATATTCCTCATGTGTTCTGTATTTCGAGAAGATGAAGAAATTCCTACCGAAAGGCTAACTAGACTTGGCATAGGAGCAGGCCTTTTTGGGGAAGATTATGGAAGCTACGAAGATGCTCGAAGTCAAGTATTGACATCCAAAAATAAACTCATAGATTCTTGTTTATTGTTGGAGGCCGGTCAAAGTGAAGTGAAAATGCATGACTTGGTTCGTGATGCAGCCCAATGGTTAGCGAACAAAGAGATTCAAACGATAAAGCTATCTGATAAAAATCAAAGGGCAATGGTTGAAAGGGAGAATAATATTAAATATTTGTTATGTGAAGGCAAGCTAAAGGATGTTTTTTCCTGTAAGATTGATGGTTCCAAGCTTGAGATTCTGACTCTCTTTGTGCATAAGGATGAAGACTGCGACGATGTGAAAATCGAAGTACCAAATTCATTTTTTGAAAATAATACTGGCCTTCAAGTTTTTCATTTATTCTATAATCATTTTCATGAGCTAGCTCTATCATTACCTCAATCAATTCAGTCGTTGAAGAATATTCGATCTCTTCTCTTTAAGCGTGTCAATTTGGGTGATATCTCTATTTTTGGAAATTTGCAAAGTCTTGAGACACTTGATTTGGACGATTGTATAATTGATGAATTGCCACATGGAATTACAAAACTGGAGAAGTTTAGATTGTTGAACTTGGAATGTTGTAAAATTGTAAGGAATAATCCATTTAAAGTGATTGAAAGATGTTCATCACTTCAAGAGTTATATTTCATGAACAGTTTTAATGAATTTTGCCGAGAAATAACTTTCCCTAAACTGCAAAGGTTTTGTATCGATGAATACTGGGATTCAGTGAATGGTTCATCATCAAAGTATGTGTATTTTGAAGACAACGATGAAGTTTTCCTATCTGAAACAACACTCAAGTACTGTATGCAAACAGCTGAGATTCTTAGATTAAGAAGAATCGAGAAGGGATGGAGAAATCTCATACCCGAGATTGTTCCTGTAGATCAAGGTATGAATGATCTAGTTGAGCTTAATTTGAGTTTCATTTCACAACTACGGTGCCTCATTGACTCTAGTAGGCATACTGATTCTCAAGTACCAAATGTCTTCTCCAAGTTGGTTGTACTAAAGCTCAATAAAATGGAAAATTTGGAAGAATTGTGCAACGGTCCACTTTCATTTGAGTTTCTAAAGAGTTTAGAGAAGCTATCAATCAAAGGTTGTGAACGTTTCCATAGCTTGTGCAACCTAAACCTCTGCAATCTAAATAAGGTGTCATTGAAGGAATGCCCGATGTTGATCTCCCTATTTCAAGTGTCAACTGTTCGTTGCCTAGTGTTGTTGGAGATATTGGAAATAATTGACTGTAGGTGTCTCGAATACATAGTAATAGATGAAAGGAAAAGGGAGGAATATTCAAGAGGTGAAATAGTTGTTGATGATGATGATATTGATAGCAAGAGTCGCGACTCAATGTTTCCAAAACTGAAAGTTCTTAAAATTGAGAAGTGTCCAGAACTTGAATTAATTCTATCTACCCATGATCTTCCGGCACTAGAATCCATTACATTGAAAAGATGTGATAAGCTGAAATACAAATTTGACCAATATGTCAAACTTGGTTCCCTAAAAAAGATGGAGCTTGATGGTTTATCAAATTTGATCGACATTTCCCCAGAATGTTATGGTACCATGACTTCATCGATTAAGGGGCCTTCTTCCGTCTCTAGAGATGCTTCCAAGCCACAAAAACAATCTGACCCTATCAAATGCAATATCTTTTCATGGACAATGAGTACTGCGTGTACTAAAACCCCATTGGTTTCTGAGGATCAACCGCATGAAAACTTAATTGCAACAGAATCAAATTCATATTGCCTTAACACATGGGAACAAGCTCAATGTCTTTCAAGACAATCACATAACCTGTGCAATATTAAAATGATTAAATTGTGCAATATTTCAAAGATAAAATCGGTGTTTATCCTGTCTATTGCTCCAATAATGTTGTTGGAAACTTTGACAATTAAAGGTTGTGATGAATTGAAGCACATAATAATAGACACTGGAGATCATGACAGTGGTAGCAAAAAGCTATGCAATGTCTTTCCAAAATTGAAATCGGTCTACATTGAGGATTGTGTGCAACTGGAATACATATTTGGAGACTACACTGATCATCATCAAAACCAATGTGAGATTCACCTTCATCTTTCATCTTTAGAATGTCTCAGTCTTTGCAATCTGCCAAATTTTGTCGCCATGAGTCCCAAACAATATTACACAACATTTCCACCTTTGAAAGAACTTGTACTCAAAGAATGCTCCCAGTTTGCTAATGTCAAATCTATTGGTGATTTCATATCTCATCATTCGGTAGCAAGATCTGTGGACAGTACAATCATGAAGGAATTGAGTGGCAACATGGAGCATTTTCTCGGTTTAGAAAGTCTCAAGGTATATAACTCCAAAGTAGAAAATATATTTTTTCTCAATGAAGAAAATGGACAGCAGATGAACTTGGGGTTGCAATACATACAGTTGTGTGATCTGCTCATGATGAAGTTTCTTTTTGTGGGTGCCAACAATGCTTTTGCCCTCAAAAACCTTAGACGGATAAACATTGTGCGATGTGAAAAATTGGAAATTGTATTCTCCACTTCCATTTTAAGATTTCTGCCACAGTTACGTGATCTAAGAATAGAAGAATGCAAAGAGTTGAAGCATATTATTGAAGATGATGATTCGGAGAATAAAAAATCATCAGATACAAAGACATGCTTCCTAAAACTAAATAAACTTGTTGTGATAAAGTGCAACAAGTTGAAATATGTTTTTCCAATCTCCATATGTAAAGAGCTTCCTGAGCTAAATCTTCTAGTGATAAGAGAAGCAGATGAGCTAGAGAAAATATTTGCAGGTGAAGGTGATGATCAGAAAGTGGAGATTCCAAAGCTGAGATATCTTGCATTTCTCAACCTACCAAGCCTCTGCCAGACACAAGAAGTTCAATTTGAGGCTGTAAAAGACCGTTTTGTACAAAACTGTAAAAAACTCTCTATCACTACAGCGTTAACTCCCAAGGACATTGACATTTCTCATTTTGATTATTCAGAGGGGTTTGAGTTTCATTGGTATAATCTATATTACCTATTTCTAAAAGAGTCCAAATGCCATGATACTAGTAATAAACACCCAAGTAATTCAAAAACCACCGAAGATTTTGCCGCTGGGATTGAAGTTCAAGTAGCATCAGAACATGAGTTGACATCTTCACAGGAGTTGATGAATGAAAAATCACTTGATCAACAGTGTATGATGGACCAACAACATTCACGTGAAGAAACTGATTGTAGAACATCTTCACAGGAAGATGGCGACGGCCAAATAGCCACGACTTCTTTTTCCATTGCTACTACAGAGTCAAATGATCAAGTTTCGTTAAATGATGATGTTGCCATGAAAGTAAGCTCAGTTGTTGAGCAACAGTTTCCTAAGGAGGATGTAATTATAGGTTCAAGACACAATGTTGCTACTACAGAGTCAAATGATCAAGTTTCGCTAAATGACGATGTTGCCATGAAAGTAAGCTTAGTTGTTGAGCAACGGTTTCCTAACAAGGATGAAATTATAGTTTCAAAATCATGGCCATCTTCTATTGCCTCTCAGTTTCCTTCAAAGCCTTCTGAAGGGGACTCTTCTCATATAGTAGAAGATTCAAGTTCTTCTTTACTTGTCACAAGGGAGCTTGAGCAACTTGTCGTCAAAAAGCATTTGGATCATGAAAACTTATCTTTGTTGACCGATTTCTTTATCAAGCATCCTTATGTTGTTTTAAAGGATACTTCACTTAGTAACAGATACAAGGGTTATGCCTACAACTGTCTTTCTGAGCTATTGAAATTCCTCCAAACGCATAGTGTGTTGGATGTGTCAGGTTCAAGCCACTCTGAATTTGTTGAGTTATTACAAGACGTGCGCAAATTTTCTTTTGATAAGAAATGGTTGAATGGTGTCGAAAACCATGCTTTGTTTCCTGGTTTACAAGTCTCTGAAGCTGCGTTGCAAAAACTGTTGGACTCAAAACAGATGTTGACTCAACATGTGGAGGATCTTAAGCATCAATTGGCTTCCTCTGAAGCTGTTTTGGAGAGTATCATTCAACAGGAGGCGCAGATTTTAGAAACTCGGGCTGCTATAACCGATCCTATCGGCTTTTAG 5421 0.3724 MASFVTDLAKPYVEKLINGAIAESSYICCFTCIAKDFEEEKIRLEVERKTVKQRVDVATRRGEDVQGNALFWEEEAEKLIQEDTRTTKKCFFGFCSDCIWRYRRGKELANKQKQIKILMETGKELAIGLPARLPDVERYSSQHYIPFKSRESKYKELLDALTDENNYIIGLKGMGGTGKTTLAKAIGKELKQSEQFTHVIDTTVSCSPDIKKIQDDIAGPLGLKLDDCSESDRPKKLWSRLTKDEKILLILDDVWGDIDFDEIGIPYSDNHKGSRILVTTRNMLVCNRLCSKTIQLDLLSEKDAWIMFKSYAGLSDKSTKNLLDKGRKIANECKRLPVAIAAIASSLKGEQRLEEWDAALNSLQKHMPMHGVDAELVKIYKCLKFSYDNLKNEKAKRIFLMCSVFREDEEIPTERLTRLGIGAGLFGEDYGSYEDARSQVLTSKNKLIDSCLLLEAGQSEVKMHDLVRDAAQWLANKEIQTIKLSDKNQRAMVERENNIKYLLCEGKLKDVFSCKIDGSKLEILTLFVHKDEDCDDVKIEVPNSFFENNTGLQVFHLFYNHFHELALSLPQSIQSLKNIRSLLFKRVNLGDISIFGNLQSLETLDLDDCIIDELPHGITKLEKFRLLNLECCKIVRNNPFKVIERCSSLQELYFMNSFNEFCREITFPKLQRFCIDEYWDSVNGSSSKYVYFEDNDEVFLSETTLKYCMQTAEILRLRRIEKGWRNLIPEIVPVDQGMNDLVELNLSFISQLRCLIDSSRHTDSQVPNVFSKLVVLKLNKMENLEELCNGPLSFEFLKSLEKLSIKGCERFHSLCNLNLCNLNKVSLKECPMLISLFQVSTVRCLVLLEILEIIDCRCLEYIVIDERKREEYSRGEIVVDDDDIDSKSRDSMFPKLKVLKIEKCPELELILSTHDLPALESITLKRCDKLKYKFDQYVKLGSLKKMELDGLSNLIDISPECYGTMTSSIKGPSSVSRDASKPQKQSDPIKCNIFSWTMSTACTKTPLVSEDQPHENLIATESNSYCLNTWEQAQCLSRQSHNLCNIKMIKLCNISKIKSVFILSIAPIMLLETLTIKGCDELKHIIIDTGDHDSGSKKLCNVFPKLKSVYIEDCVQLEYIFGDYTDHHQNQCEIHLHLSSLECLSLCNLPNFVAMSPKQYYTTFPPLKELVLKECSQFANVKSIGDFISHHSVARSVDSTIMKELSGNMEHFLGLESLKVYNSKVENIFFLNEENGQQMNLGLQYIQLCDLLMMKFLFVGANNAFALKNLRRINIVRCEKLEIVFSTSILRFLPQLRDLRIEECKELKHIIEDDDSENKKSSDTKTCFLKLNKLVVIKCNKLKYVFPISICKELPELNLLVIREADELEKIFAGEGDDQKVEIPKLRYLAFLNLPSLCQTQEVQFEAVKDRFVQNCKKLSITTALTPKDIDISHFDYSEGFEFHWYNLYYLFLKESKCHDTSNKHPSNSKTTEDFAAGIEVQVASEHELTSSQELMNEKSLDQQCMMDQQHSREETDCRTSSQEDGDGQIATTSFSIATTESNDQVSLNDDVAMKVSSVVEQQFPKEDVIIGSRHNVATTESNDQVSLNDDVAMKVSLVVEQRFPNKDEIIVSKSWPSSIASQFPSKPSEGDSSHIVEDSSSSLLVTRELEQLVVKKHLDHENLSLLTDFFIKHPYVVLKDTSLSNRYKGYAYNCLSELLKFLQTHSVLDVSGSSHSEFVELLQDVRKFSFDKKWLNGVENHALFPGLQVSEAALQKLLDSKQMLTQHVEDLKHQLASSEAVLESIIQQEAQILETRAAITDPIGF* 1807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1090 1806 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 56 960 - -
Tpr4g1090 1806 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1034 1154 - -
Tpr4g1090 1806 Pfam NB-ARC domain 153 389 IPR002182 GO:0043531
Tpr4g1090 1806 Gene3D Ribonuclease Inhibitor 480 976 IPR032675 -
Tpr4g1090 1806 MobiDBLite consensus disorder prediction 1504 1528 - -
Tpr4g1090 1806 Gene3D - 298 391 IPR042197 -
Tpr4g1090 1806 MobiDBLite consensus disorder prediction 1508 1522 - -
Tpr4g1090 1806 Coils Coil 1755 1789 - -
Tpr4g1090 1806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 402 IPR027417 -
Tpr4g1090 1806 PANTHER - 56 960 - -
Tpr4g1090 1806 PANTHER - 1034 1154 - -
Tpr4g1090 1806 PRINTS Disease resistance protein signature 168 183 - -
Tpr4g1090 1806 PRINTS Disease resistance protein signature 241 255 - -
Tpr4g1090 1806 PRINTS Disease resistance protein signature 333 347 - -
Tpr4g1090 1806 PRINTS Disease resistance protein signature 596 612 - -
Tpr4g1090 1806 SUPERFAMILY L domain-like 1067 1402 - -
Tpr4g1090 1806 Gene3D - 134 295 IPR027417 -
Tpr4g1090 1806 Coils Coil 34 54 - -
Tpr4g1090 1806 Gene3D Ribonuclease Inhibitor 1137 1375 IPR032675 -
Tpr4g1090 1806 SUPERFAMILY L domain-like 457 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1090 Tpr-Chr4 10494843 10504231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1090 169 583 WRKY Transcription Factor Family AT5G45050 24.356 5.88e-17 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1090 - - cam:101508676 2169.81