Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1086 ATGTTTTTCAAACATATCACAATGTTTATGTTTCTGATCTTTATCATAAACACAGTCTTAGTAACATCAGCGGATCTAAAACCTGAATATTACTCAAAAACATGTCCACAAGCTGAAGCCATTGTCCGAAATATTATGAAAAAATCTTTTTTGAAAGAACCAAGAAGCGTTGCCTCTATTATGCGCTTTCAATTTCATGATTGCTTTGTTAATGGGTGTGATGGTTCTTTGTTGCTTGATGATACACCAACAATGCTTGGAGAGAAATTGTCCCTTTCAAATATAAATTCAGTTAGATCATTTGAAGTTGTTGATGAGATTAAAGAAGCTTTAGAGAAAGCTTGCCCTGGAATTGTTTCTTGTGCTGATATCATAATCATGGCTTCTAGAGATGCTATAGCACTGACAGGAGGACCAGATTGGCAGGTGAAGCTAGGAAGATTAGACAGTTTATCAGCAAGTCAAGATAACTCAAGCGATATCATGCCAAGTCCAACATCCAATGCAACAACTCTTATCGATCTATTTCAAAAATACAACCTCAATGTGAAGGACCTTGTAGCACTCTCAGGATCACACTCTATCGGAAAAGCTCGTTGTTTTTCGATCATGACTAGGCTATACAATCAATCGGGCAGCGGAAAGGCCGACCCTGCATTCAATCCTAGTTTTAGAGCAGAGCTTTTCAAGCAATGTCCATTAGATGTTGATCAAAATAAGACATTGAACCTTGATGCAACTCCAGTGATTTTCGATAATCAATATTTCAAGGATTTGGTTGATGGAAGAGGATTCCTTAACTCTGATCAAACACTTTTCACATTCCCTCAAACTCAAGGGTTGGTGAGGTTATTTAGTATTGATCAAAATGAGTTTTTCAAAGCATTTGTTGAAGGAATGTTGAAATTAGGTGATTTGCAGTCCGATCAACCTGGCGAGATTAGGAAGAATTGCAGAGTCGTCAATTCTCACCCTGCACCACATGTTATGTATGAACACATGACGTGA 1008 0.377 MFFKHITMFMFLIFIINTVLVTSADLKPEYYSKTCPQAEAIVRNIMKKSFLKEPRSVASIMRFQFHDCFVNGCDGSLLLDDTPTMLGEKLSLSNINSVRSFEVVDEIKEALEKACPGIVSCADIIIMASRDAIALTGGPDWQVKLGRLDSLSASQDNSSDIMPSPTSNATTLIDLFQKYNLNVKDLVALSGSHSIGKARCFSIMTRLYNQSGSGKADPAFNPSFRAELFKQCPLDVDQNKTLNLDATPVIFDNQYFKDLVDGRGFLNSDQTLFTFPQTQGLVRLFSIDQNEFFKAFVEGMLKLGDLQSDQPGEIRKNCRVVNSHPAPHVMYEHMT* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1086 335 Pfam Peroxidase 42 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 Gene3D Peroxidase, domain 2 163 303 - -
Tpr4g1086 335 ProSiteProfiles Plant heme peroxidase family profile. 25 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PANTHER PEROXIDASE 17 11 324 - -
Tpr4g1086 335 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 SUPERFAMILY Heme-dependent peroxidases 26 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 PANTHER PEROXIDASE 72-RELATED 11 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1086 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Tpr4g1086 335 Gene3D - 29 322 - -
Tpr4g1086 335 CDD secretory_peroxidase 26 321 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1086 Tpr-Chr4 10467330 10469602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1086 5 325 Peroxidase AT2G22420 71.651 1.89e-174 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1086 K00430 - fve:101312090 491.886