Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1085 ATGTTGTTCAAACCTATCACCATGTTTATGTTTCTCATTTTCATCATAAACATAGTCTTAGTAACCTCAGCAGATCTAAAACCTGGGTATTACTCAAAAACATGTCCACAAGCTGAAACCATTGTCAGAGATGTTATGAAAAAATCTCTTGCAAGAGAACCAAGAAGTGTTGCCTCTATTATGCGCTTTCAATTTCATGATTGCTTTGTTAATGGGTGTGATGGTTCTTTGTTGCTTGATGATACACCAACCATGCTTGGAGAGAAATTGGCCCTTTCAAATATAAATTCACTTAGATCATTTGAAGTTGTTGATGAGATTAAGGAGGCATTAGAGAAAGCTTGCCCTGGAATTGTTTCTTGTGCTGATATCATAATCATGGCTTCAAGAGATGCTGTAGCACTGACAGGAGGACCAGATTGGCAGGTGAAGCTAGGAAGATTGGACAGCTTATCAGCAAGTCAAGATAACTCAAGCGATATCATGCCAAGTCCAAGATCCAATGCAACCACTCTCATCAATCTCTTCCAAAAATACAACCTCAATGTGAAGGACCTTGTAGCGCTCTCAGGATCACACTCTATCGGAAAAGCTCGTTGTTTTTCGATTATGTTTAGGCTATACAATCAATCCGGAAGCGGAAAGCCTGACCCTGCAATCGATCCCGGTTTTAGAGCAGAGCTTGACAAGCTATGTCCACTAGATGTTGATCAAAATAAGACAGGGAACCTTGATGCAACTCCTGTGGTTTTTGATAATCAATATTTCAAGGATTTGGTTGGTGGAAGAGGATTTCTCAATTCTGATCAAACACTTTTCACATTCCCTCAAACACAAGGGTTTGTGAGGTCATTTAGTATTGATCAAAATGAGTTTTTCAAAGCATTTGTTGAAGGAATGTTGAAATTGGGTGATTTGCAATCCGATCAGCCTGGCGAGATTAGGAAAAATTGCAGAGTTGTCAATCCTCGCCCTGCGCCACACGTCCTGTATTAA 996 0.3996 MLFKPITMFMFLIFIINIVLVTSADLKPGYYSKTCPQAETIVRDVMKKSLAREPRSVASIMRFQFHDCFVNGCDGSLLLDDTPTMLGEKLALSNINSLRSFEVVDEIKEALEKACPGIVSCADIIIMASRDAVALTGGPDWQVKLGRLDSLSASQDNSSDIMPSPRSNATTLINLFQKYNLNVKDLVALSGSHSIGKARCFSIMFRLYNQSGSGKPDPAIDPGFRAELDKLCPLDVDQNKTGNLDATPVVFDNQYFKDLVGGRGFLNSDQTLFTFPQTQGFVRSFSIDQNEFFKAFVEGMLKLGDLQSDQPGEIRKNCRVVNPRPAPHVLY* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1085 331 Gene3D - 29 322 - -
Tpr4g1085 331 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PANTHER PEROXIDASE 72-RELATED 11 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 Gene3D Peroxidase, domain 2 163 303 - -
Tpr4g1085 331 Pfam Peroxidase 42 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PANTHER PEROXIDASE 17 11 322 - -
Tpr4g1085 331 ProSiteProfiles Plant heme peroxidase family profile. 25 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Tpr4g1085 331 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1085 331 CDD secretory_peroxidase 26 321 IPR033905 GO:0004601|GO:0042744
Tpr4g1085 331 SUPERFAMILY Heme-dependent peroxidases 26 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1085 Tpr-Chr4 10464138 10465828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1085 10 325 Peroxidase AT2G22420 74.051 6.80e-179 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1085 K00430 - gmx:100796737 520.39