Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1082 ATGTCGATAAACATGAAAACCCTAACCCAAGCACTAGCAAAAACCGCAGCAGTAATAGAAAAAACGGTTCAAACAACGGTTCAAGAAGTCACCGGTCCAAAACCACTCCAAGACTACGAGCTTCTCGATCAGATCGGTTCCGCAGGTCCGGGTTTAGCCTGGCGACTTTATTCGGCCCGGGCTCGTGATCCTTCTCGGCAACATCAGTATCCTGTTGTTTGTGTTTGGGTTTTGGATAAACGGGCTTTGTCTGAGGCTAGATTGCGAGCTGGATTGACGAAAGCGGCTGAGGATTCGTTTTTGGATTTGATTCGGACTGATGCTGGGAAGCTTGTTAGGTTAAGACATCCAGGGATTGTTCATGTTGTTCAGGGATTGGATGAGAATAAGAATGCCATGGCGATGGTTACCGAACCTTTGTTTGCTTCTGTCGCTAATACTCTTGGTTGTTTTGATAATGTTGCTAATGTTCCTAAAGATCTTAAGGGAATGGAAATGGGTCTGTTGGAGGTAAAACATGGTTTACTTCAGATAGCAGAATCATTGGATTTTCTCCACAACCATGCTCATCTTATTCATCGGGCTATATCACCTGAGAATGTTTTTATCACATTGAGTGGAGCCTGGAAACTTGGTGGATTTGGTTTTGCAATTTCTTCTTCTCAGAACCCTGGTGATTCGTCTAATCTGCATGCCTTCCATTATGCTGAATATGACGTCGAAGACTCAGTTTTGCCACTTCAGCCATCTATTAATTACACTGCTCCAGAGATGGTGAGGAGCACTGCTTCTTCAGCTGGGTGCTATTCTGATATTTTCAGTTTTGGATGTCTTGCCTACCATTTAATTGCTCGCAAGCCGTTGTTTGACTGCCACAACAATGTCAAGATGTACATGAATACCTTGACTTACTTATCCAGTGATGCTTTCTCATCTATCCCATCGGATCTGGTTCCTGACCTGCAAAGGATGCTCTCTTCAAATGAATCTTTCAGGCCAACTGCAATGGATTTTACTGGCTCACAATTTTTTCGGAATGACACTAGGTTGCGTGCTTTGCGCTTCCTGGACCACATGCTTGAAAGAGATAACATGCAGAAGTCAGAGTTCTTAAAAGCATTGTCAGATATGTGGAAAGATTTTGATTCCCGTGTATTGCGATACAAGGTCCTTCCACCACTTTGTGCAGAACTAAGGAATGTAGTTATACAGCCGATGATTCTACCAATGGTTCTAACCATTGCAGAGTCTCAGGACAAGAATGATTTTGAGCAATCAACACTCCCAGCTCTTTTCCCTGTCTTAAGCACTGCTTCTGGTGATACAATGTTACTACTTCTAAAGCATGCCGAGCTAATAATAAACAAGACTAGTCAAGATCATTTAATTTCACATGTTCTTCCAATGATTGTTCGGGCCTATGATGATAATGATGCACGTTTACAAGAAGAGGTCCTGAAAAAATCAGTATCCCTTTCCAAGCAACTTGATGCCCAGCTGGTGAAACAAGTGATTTTGCCCCGTGTTCATGGACTAGCACTCAAAACAACAGTTGCTGCGGTTAGAGTCAATGCTTTGTTGTGCCTTGGAGACATGGTTAACCGACTTGATAAACATGCTGTCGTGGAAATCTTGCAAACTATTCAGCGCTGTACTGCTGTTGACCGTTCCCCTCCAACCCTTATGTGTACCCTCGGGGTTGCAAATTCTATTTTTAAGCAGTATGGAGTAGAATTTGTTGCTGAGCATGTTCTTCCATTGCTTGTGCCACTCCTGACTGCTCAACAATTGAATGTTCAACAGTTTGCCAAATATATGCTCTTTGTCAAGAATATGCTCCAGAAGATAGAAGAGAAGCGAGGAGTTGCTGTGACTGATTCTGGAATCCCAGACGTAAGACTATCTTCTGTGGTTAATGGCCTTCAGGTGGAAGCTCCAAGGACAAGCAACAGCACTGTTGCTGCTTCAACAAAAAGCAGCTCCTGGGATGCAGATTGGGGTCCCAAAATAACGGGAACCGCCAATTCTGTCGAGAATTCTATTAATACATCCAGTCAATCTGCGACAAGCAACCCTGTGGGTCCAGTAGCATCTTTACAAAATAATCTGTCCTTATCTGGTGTATCTAATCAGCAGACAGCCAAGTCAAGTCCTTCAGTAGATTTCGAGTGGCCGCCTCGTGCATCTTCTGGTGTTACCTCACAATTTGGGGATACTGAAAGACAAACAGTTGCAGCGGGAACCTCATCTACATCTAATCTTGAAGATGACGATCCTTTTGCTGATTGGCCTCCGCGCCCTAGTGGCTCATTAGCTGGTGGATCTGGAAATTCCAACAATGGTACTATAGGAATGGCACTAAACAAGATGGGGCACAATTCAATGACAAGCAATTCAAGCAATCTTGGTCTCCAATCCAGCAACAATTGGTCTGTCAACTCCCAGAATGTCAACTCCCAGAATTCTGTGGAGTCTATCGGTATGAACCCAAGGAATTCTAGTTCATCTATGGGTAACCCGAATAATGGCTTTGAACCTCAGAGTTCGCTTGGGTTCCTAAAACAAAGTCAAGCGTTTCCAGCACCGAATGTTGCTTCATCATCATCATCATATAATAATAACGTTAAATCAACTGATCTTGGATCAATATTTTCTTCCAACAAGAATGAACAAATTGCACCTAGACTTGCGCCACCCCCTTCAACCACAGTGGGTAGAGGACGGGGAAGAGGGAGAGGAGCGACTTCAACCAAACAACCCTCTCATACCAAGTCAAACAGTGATCAGCCACCCCTTTTGGATTTGCTGGGGTAG 2814 0.4378 MSINMKTLTQALAKTAAVIEKTVQTTVQEVTGPKPLQDYELLDQIGSAGPGLAWRLYSARARDPSRQHQYPVVCVWVLDKRALSEARLRAGLTKAAEDSFLDLIRTDAGKLVRLRHPGIVHVVQGLDENKNAMAMVTEPLFASVANTLGCFDNVANVPKDLKGMEMGLLEVKHGLLQIAESLDFLHNHAHLIHRAISPENVFITLSGAWKLGGFGFAISSSQNPGDSSNLHAFHYAEYDVEDSVLPLQPSINYTAPEMVRSTASSAGCYSDIFSFGCLAYHLIARKPLFDCHNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQRMLSSNESFRPTAMDFTGSQFFRNDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQSTLPALFPVLSTASGDTMLLLLKHAELIINKTSQDHLISHVLPMIVRAYDDNDARLQEEVLKKSVSLSKQLDAQLVKQVILPRVHGLALKTTVAAVRVNALLCLGDMVNRLDKHAVVEILQTIQRCTAVDRSPPTLMCTLGVANSIFKQYGVEFVAEHVLPLLVPLLTAQQLNVQQFAKYMLFVKNMLQKIEEKRGVAVTDSGIPDVRLSSVVNGLQVEAPRTSNSTVAASTKSSSWDADWGPKITGTANSVENSINTSSQSATSNPVGPVASLQNNLSLSGVSNQQTAKSSPSVDFEWPPRASSGVTSQFGDTERQTVAAGTSSTSNLEDDDPFADWPPRPSGSLAGGSGNSNNGTIGMALNKMGHNSMTSNSSNLGLQSSNNWSVNSQNVNSQNSVESIGMNPRNSSSSMGNPNNGFEPQSSLGFLKQSQAFPAPNVASSSSSYNNNVKSTDLGSIFSSNKNEQIAPRLAPPPSTTVGRGRGRGRGATSTKQPSHTKSNSDQPPLLDLLG* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1082 937 MobiDBLite consensus disorder prediction 648 667 - -
Tpr4g1082 937 Pfam Protein kinase domain 108 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1082 937 SUPERFAMILY ARM repeat 312 608 IPR016024 -
Tpr4g1082 937 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 936 - -
Tpr4g1082 937 Gene3D Transferase(Phosphotransferase) domain 1 159 347 - -
Tpr4g1082 937 Gene3D Phosphorylase Kinase; domain 1 37 138 - -
Tpr4g1082 937 MobiDBLite consensus disorder prediction 728 756 - -
Tpr4g1082 937 MobiDBLite consensus disorder prediction 707 759 - -
Tpr4g1082 937 Gene3D - 348 621 IPR011989 -
Tpr4g1082 937 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1082 937 MobiDBLite consensus disorder prediction 914 930 - -
Tpr4g1082 937 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 7 936 - -
Tpr4g1082 937 SUPERFAMILY Protein kinase-like (PK-like) 34 348 IPR011009 -
Tpr4g1082 937 MobiDBLite consensus disorder prediction 889 937 - -
Tpr4g1082 937 CDD PK_SCY1_like 45 346 - -
Tpr4g1082 937 SMART serkin_6 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1082 Tpr-Chr4 10438409 10450296 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1082 92 335 AGC Kinase Gene Family AT3G10540 25.000 1.35e-10 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Tpr4g1082 Pkinase 1.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1082 K17541 - gmx:100796211 1471.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1082 4 10438409 10450296 Tpr4g1082 4 10438409 10450296 ECH