Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1060 ATGGATGAAACTCACAATATGTTTTGTAAAGATGATCTTGTTAACCCTATGAGCTCAATGGGGTTGCAAGTGTCCTGCATTCTTGTCGTATCACACTTCTTCAATGTTCTTTTTAGGACTGTTGGCCAACCTGGACCCATTGCACAAATCCTAGCTGGGTTGATATTAGGTCCACTATCTCATATACCATATATGAAAAGAAAATTCTTCCCAGCAAGTTCAATAAATTACTATGAAGTTGTGAGCTTCTTTTGTCGCATACATTTCATGTTTTTATTTGGTTTGGAGATGAATATTCATTACACATTGAGACATCTACGTTTGGTCACTTTGGTAGCATGTGGAGGTGCAATAATGGGTGGAATTTTTGGTCTATCTGGCTCCTTTTACTTGTATCACAAGTTAAATATACATGCTCCTATTTATTATTTTTGTATGGTCATGATGTTAATGGTATCATACACAAGCTCCCCGATGGTGATTCGTTTGTCAGCTGAGTTAAGACTTGCCACATCAGATGTTGGTAGAATCGCGGTGTCTTCAGCGTTGATCACAGAAATGGGTTGCTTATTGTTTTTCAATGTGATGGTTACTTGGAATAAACAAAATCAAATATCTTATGGTATTTATTGTACTATTACTACAACAATAGTGATTCTAATTAACAAACACTTAGCCGTTTGGTTAAATTCAAGAGATAGAAACCAAAAATACCTAAATGCCCCTGAGTCATTACTCATACTTTTTTTGCTTCTAACTAGCTCAATGATTATAGAAATTTTGGGTTACAATAGTATTATTAGTTGTTTCATTATTGGATTATTGTTTCCTAAAGAAGGTAAAACAGCTAGAACATTGATACATAAACTTGGTTATTCAATTTACAATTTTGTCCTTCCAGTATATTTTGGATATTTGGGTTTACAATGTGACCTAATAAATGTGTTTAGAAGTTTGGATAGAACAACCAATGTAGCCATATTGATTTTGTTGAGCATTGGTAGCAAACTTGGTGGTACTCTTTTGGCTTGTCGTTACCTTCATATTTCTACAAATGAAGGGATTTTTATTGGCTTCATGTTGAACACTAGAGGTTATGCTGATTTGTTGTTCTTTGGTGCTGCAGCAAAGCAAGTCATTAGTGTTGATACAGAATCTTACAATGTGTTGTTAGTATCAATAGTATTCAACACAATAATATCAGGAATAGTTGTGGCTTCTCTATCAAAGGGAGACGATAAAATGTTTTCAAACAACCATACTGCAATTGAACCACAACAAATGGAGAATGAGCTTCGGATTTTGGCTTGCGTATACGATCCGCGTCAAGTATCTACAATACTTTCAACAATACTAGCAATACATGGATCTAAAACATCGCCTTCGATAACTTATTTCATGCATCTAATAGAGCTTGTAAAGAAGATCAAGTCCAACTTGTTATTTCATGAAAAAGAAAATGATGAACTTAGCGACGAAGAAGATAGTTTTGGTGGCAATGATGTGGTTGACATTAATAATGCCTTAGATTCTTTCACTGCAGAGACAAAGATCTTGGTCTACCAAAAAAGAGCTGTATCTTCTTTTTCAAGTTTGTATGAAGATGTGTGCAATGAAGCAGAAAATCTTCGAGTATCGATTATTCTTATTCCTTTTCACAAGCATCAACGAATTGATGGAAAACTCGAAAGTGGCAAAGATGGTATAAGGACAACTAATCAGAAGATTCTTAGGCACGCCCCTTGTTCGGTTGGTGTTATTATAGAAAGAGGACTTACTATGTCATTTGGTTTCTCGGAATTAATTCAATCTGATAACATGCAAAATGTGGCAACACTTTTCATCGGTGGTCCAGATGATCGCGAGGCTATTGCTTGGAGCCTTCGTATTTCCAAATGCCCTTGCGTTAACATGACAATCATTAGATTTTTGTTGTCATCTTCTCCATCAGAAAACGAACAAATTGTCGAACGTAGTGTACAATACGAGGAAAAAGAAATTTTAATGTCATTGTCCGGGGAAGAAACTGTGAATGACGAAATTGACAATAACTTCATGGTCGATTTCTATAATCGGTATGTGGCTTCAGGAAACATTGGATATGTGGAAAATTTTGTGAAGGATGGAAAACAAACATTGGAATGTTTGAAACAAATTGGAGACATATACTCTTTGTTTATAGTAGGAAAAGGTAGTAGAAGAAATAGTTCAATAACAATAGGTATGAGTGATTGGGAAGAGTGTCCAGAACTTGGAACAGTTGGTGATGTATTGGCTTCTTCAGATTTTGATATTCATGGATCTGTTTTGGTCATTCAACAACATAGAAATGTCAAGAAAGGATTAATACATTCTTAG 2358 0.3516 MDETHNMFCKDDLVNPMSSMGLQVSCILVVSHFFNVLFRTVGQPGPIAQILAGLILGPLSHIPYMKRKFFPASSINYYEVVSFFCRIHFMFLFGLEMNIHYTLRHLRLVTLVACGGAIMGGIFGLSGSFYLYHKLNIHAPIYYFCMVMMLMVSYTSSPMVIRLSAELRLATSDVGRIAVSSALITEMGCLLFFNVMVTWNKQNQISYGIYCTITTTIVILINKHLAVWLNSRDRNQKYLNAPESLLILFLLLTSSMIIEILGYNSIISCFIIGLLFPKEGKTARTLIHKLGYSIYNFVLPVYFGYLGLQCDLINVFRSLDRTTNVAILILLSIGSKLGGTLLACRYLHISTNEGIFIGFMLNTRGYADLLFFGAAAKQVISVDTESYNVLLVSIVFNTIISGIVVASLSKGDDKMFSNNHTAIEPQQMENELRILACVYDPRQVSTILSTILAIHGSKTSPSITYFMHLIELVKKIKSNLLFHEKENDELSDEEDSFGGNDVVDINNALDSFTAETKILVYQKRAVSSFSSLYEDVCNEAENLRVSIILIPFHKHQRIDGKLESGKDGIRTTNQKILRHAPCSVGVIIERGLTMSFGFSELIQSDNMQNVATLFIGGPDDREAIAWSLRISKCPCVNMTIIRFLLSSSPSENEQIVERSVQYEEKEILMSLSGEETVNDEIDNNFMVDFYNRYVASGNIGYVENFVKDGKQTLECLKQIGDIYSLFIVGKGSRRNSSITIGMSDWEECPELGTVGDVLASSDFDIHGSVLVIQQHRNVKKGLIHS* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1060 785 Gene3D - 18 415 IPR038770 -
Tpr4g1060 785 PANTHER CATION/H + ANTIPORTER 21 775 - -
Tpr4g1060 785 Pfam Sodium/hydrogen exchanger family 27 408 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr4g1060 785 Coils Coil 473 493 - -
Tpr4g1060 785 PANTHER CATION/H(+) ANTIPORTER 1 21 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1060 Tpr-Chr4 10261341 10264907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1060 11 783 Antiporter Super Family AT1G79400 37.147 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1060 - - mtr:MTR_4g029520 1278.85