Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1042 ATGGAACGAAGCGGAAGCGTGCTTATGCAACGATACGAAATAGGGAAATTATTAGGTCAAGGAACATTTGCAAAGGTCTATCATGCAAGGAACCTCATAAACGGCTTGAATGTTGCCATCAAAGTTATTGATAAAGAGAAAGTTTTGAGGGTTGGGATGATCGATCAAATTAAGCGTGAAATTTCAGTGATGAGACTCATCAGGCATCCACATGTTGTCGAGCTTTACGAGGTAATGGCGAGCAAATCCAAAATTTACGTTGTTATGGAGTATGTAAAAGGCGGTGAACTCTTCGACAAGGTATCGAAAGGAAAACTAAAGCATGATGAAGCAAGGAGATACTTTCAGCAATTGATCAGTGCTGTTGATTACTGTCATAGCAGAGGTGTGTGTCATCGCGATTTAAAACCAGAAAATCTTCTCTTGGATGAAAATGGAAATTTGAAGATCTCGGATTTCGGGTTAAGTGCACTTGCCGAGACTAAGCACCAAGATGGATTACTCCATACTACATGCGGCACTCCTGCGTATGTCGCTCCAGAAGTGATACACCGCAAGGGATATGATGGGATGAAAGCTGATATATGGTCGTGTGGTGTGATCCTGTATGTTCTATTGGCTGGTTATCTTCCGTTTAGAGATCCGAATCTGATAGAGATGTATAAGAAAATCGGTAAGGCTGATTTCAAGTTTCCTAACTGGTTTGCATCGGATGTACGCAGATTGTTGTCGAAAATTCTGGATCCAAATCCAAAGAGCAGGATATCAATTGCCAAAATTATGGAAAGTTCTTGGTTCAAAAAGGGGTTAGAGAAGCCTATTGTTACTGACACAGACAAACAAGAACTAACTCCTCTCGATGCTGATGGAGTATTCGGAGCTTGTGAGAATAATGATCATGTTGATCTGTTGAAACCTCGTAATAATTTAAACGCTTTCGATATCATCTCCTTTTCATCAGGTTTTGACTTGTCTGGTTTGTTTGAGGAGAAAGAAAAAAAGAAAGAAATACGTTTTACGGCTAACAAGCCTGCTTCAATCATCATCTCCAAATTTGAAGAAATTTGCAAGTGTATTGGGCTAAAACTGAAGAAAAAAGACGGAGGTTTGTTCAAGTTAGAAGGTTTGAAGGAAGGAAGGAAAGGACATTTGGGTATCGACGCAGAGATTTTCGAGATCACGCCAATGTTCCATTTAGTTGAGTTGAAAAAGTCGAATGGAGACACGTTGGAGTACCAAAAGCTGTTGAAAGATAATGTTAGGCCTTCACTTAAGGACATTGTTTGGTCATGGCAAGGAGAACAACCACAGCAATTGCAACATGGAATGGTGCAGAAAGAGGAACAACCATCTTCCTAA 1359 0.4025 MERSGSVLMQRYEIGKLLGQGTFAKVYHARNLINGLNVAIKVIDKEKVLRVGMIDQIKREISVMRLIRHPHVVELYEVMASKSKIYVVMEYVKGGELFDKVSKGKLKHDEARRYFQQLISAVDYCHSRGVCHRDLKPENLLLDENGNLKISDFGLSALAETKHQDGLLHTTCGTPAYVAPEVIHRKGYDGMKADIWSCGVILYVLLAGYLPFRDPNLIEMYKKIGKADFKFPNWFASDVRRLLSKILDPNPKSRISIAKIMESSWFKKGLEKPIVTDTDKQELTPLDADGVFGACENNDHVDLLKPRNNLNAFDIISFSSGFDLSGLFEEKEKKKEIRFTANKPASIIISKFEEICKCIGLKLKKKDGGLFKLEGLKEGRKGHLGIDAEIFEITPMFHLVELKKSNGDTLEYQKLLKDNVRPSLKDIVWSWQGEQPQQLQHGMVQKEEQPSS* 453
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1042 452 Pfam NAF domain 308 365 IPR004041 GO:0007165
Tpr4g1042 452 PANTHER - 2 441 - -
Tpr4g1042 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Tpr4g1042 452 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1042 452 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1042 452 CDD CIPK_C 311 425 - -
Tpr4g1042 452 Gene3D Transferase(Phosphotransferase) domain 1 4 308 - -
Tpr4g1042 452 SUPERFAMILY Protein kinase-like (PK-like) 8 276 IPR011009 -
Tpr4g1042 452 Gene3D Kinase associated domain 1, KA1 309 430 - -
Tpr4g1042 452 CDD STKc_SnRK3 11 265 - -
Tpr4g1042 452 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1042 452 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Tpr4g1042 452 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Tpr4g1042 452 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 441 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr4g1042 Tpr-Chr4 10096076 10099763 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1042 1 437 CBL-interacting serine-threonine protein kinases AT5G58380 63.956 0.0 595
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr4g1042 Pkinase 4.4e-76 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1042 K07198 - gmx:100815651 735.717
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1042 4 10096076 10099763 Tpr4g1042 4 10096076 10099763 ECH
Tpr4g1042 4 10096076 10099763 Tpr4g2945 4 33585245 33589283 ECH
Tpr4g1042 4 10096076 10099763 Tpr3g3631 3 40375483 40378615 ECH