Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1038 ATGAGGAATAACAAGTTTAAGCTCTCAGATATGATTCCAAATGCTTGGTTTTACAAGCTTAAGGAAATAGGTAAAGGAAAAAACCAAACACCAACACCTTCTAAGAACAAACAACAACCTTCTTCATTAGCCTCAACAAAAACAACCTTAAAACAAAATCAACCAAATCAATGCAATCCTAGAAAATCATACTACTTCACAAGAGACCTTAAACAAGACAACAGCCTCAACAACACCAACAAATTTTTCACTTCACCAAAAACAACTCAACCACAATCACCATCCAAAAACAGAACAAGAAAAAGAACAACTACAACATCAAAGTCAAAACCAAAAACATGTTCTTCTTCACCAAAACATGCTACCTCTTCAGTTTCTGCAGGTTGTAGCTGTCGAACAACGCTTGAATCAGTGTGGACAAAATCTGATTCTCCACACGAAAACTCGTCCTCATCTCCACTTGATAGTTTTACTGGGTCAGGGTCAGAATCCCCTGACCCAGAATTTAGAACAGACCGTGTTCTAATTCCAAACGAAACATCTTCGTTCGACAAAATGGTTTCGTTGTCTACTACTTCTTGTGCTTGTAACAAAATCTCCAACAACAACATTGATGATATTGTTATTGATGTTGACAAGAATTCTCTAGCTAGAAAAGATGATAAACTTAAAAGGTATGATTATTCATATGATTCTTTTTCAAAGCTAGAACTTCCTCGTATCATTACAAAATCTCCGATGAAAAAAGAACACAAACCCATCAAAGAAGAGTCTCTAAAGATTAAAATTTTGAATCAACAACAACAAGAGAAGAAGAAAAAGAAGAAGATAATTGGTTCTGCAAATTCTCCTGGATTGAAACTTCGTTTAAAGTCTCCAAGAATTGCTTCTATAAAGAAAGTCCAATTTCATCATGGCCAGAAAAGCGCAACTTCTGGCTACCGGAGAAGCTTCTCCGGTAGCCTGGCAATAGTGAAGTCATCTTTTAATCCTCAAAAGGATTTTAGAGAGTCAATGGTTGAGATGATTGTTGAGAATAACATAAGAGCATCTAAGGATTTGGAAGATCTTCTTGCTTGTTACCTTTCATTGAATTCAGATGAGTATCATGATCTTATTATCAAGGTTTTTAAGCAAATATGGTTTGATTTGACTGAAACAGGGTAG 1167 0.3556 MRNNKFKLSDMIPNAWFYKLKEIGKGKNQTPTPSKNKQQPSSLASTKTTLKQNQPNQCNPRKSYYFTRDLKQDNSLNNTNKFFTSPKTTQPQSPSKNRTRKRTTTTSKSKPKTCSSSPKHATSSVSAGCSCRTTLESVWTKSDSPHENSSSSPLDSFTGSGSESPDPEFRTDRVLIPNETSSFDKMVSLSTTSCACNKISNNNIDDIVIDVDKNSLARKDDKLKRYDYSYDSFSKLELPRIITKSPMKKEHKPIKEESLKIKILNQQQQEKKKKKKIIGSANSPGLKLRLKSPRIASIKKVQFHHGQKSATSGYRRSFSGSLAIVKSSFNPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTETG* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1038 388 Coils Coil 254 274 - -
Tpr4g1038 388 MobiDBLite consensus disorder prediction 140 171 - -
Tpr4g1038 388 MobiDBLite consensus disorder prediction 81 100 - -
Tpr4g1038 388 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Tpr4g1038 388 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 386 - -
Tpr4g1038 388 ProSiteProfiles OVATE domain profile. 324 383 IPR006458 -
Tpr4g1038 388 MobiDBLite consensus disorder prediction 24 60 - -
Tpr4g1038 388 MobiDBLite consensus disorder prediction 27 60 - -
Tpr4g1038 388 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 386 IPR038933 GO:0045892
Tpr4g1038 388 Pfam Transcriptional repressor, ovate 328 384 IPR006458 -
Tpr4g1038 388 MobiDBLite consensus disorder prediction 140 165 - -
Tpr4g1038 388 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 323 385 IPR006458 -
Tpr4g1038 388 MobiDBLite consensus disorder prediction 81 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1038 Tpr-Chr4 10062781 10064297 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tpr4g1038 Ovate 3.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1038 - - cam:101506553 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1038 4 10062781 10064297 Tpr4g1038 4 10062781 10064297 ECH