Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1037 ATGTATAAGGGAAGAATAGGAGGCAAAGCTCAACCTGGATATGTTGAAACTGATCCTTCAGGTCGATATGGACGTTTTAGGGATGTCCTTGGAAAAGGAGCAACGAAGGTAGTGTATAAGGCATTTGATGAAATCCTAGGAATAGAAGTGGCTTGGAACCAAATCAAGCTTGATGAAGTTTTTCATTCACCAGACCAACTTCAACGTCTCTATTCAGAGGTTCATCTCCTAAAGAACTTGGATCATGACTCTATCATTACTTTCCATGGTACTTGGATTGATGCTGATTGTAGAACCTTCAACTTCATCACTGAATTGTTCACCTCCGGAACCCTACGAGAGTATAGAAAGAAGTACCCTCGTGTAGATGTAAGAGCAATAAAAAATTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTATTTGCATAGCCATGATCCTCCTGTGATACATAGAGACCTAAAGTGTGATAATATATTTGTCAATGGCAATATGGGTAAAGTCAAGATTGGTGATTTAGGCCTTGCAGCAATTCTTCGTAGTTCACAACATGCTCACAGTGTCATAGGTACACCAGAATTTATGGCACCAGAATTGTATGAAGAGGAATATACTGAGTTGGTAGACATATACTCTTTTGGCATGTGTATGATTGAGTTGTTCACTTCTGAGTTCCCATATAGCGAGTGCTCCAACCCAGCTCAAATATACAAGAAAGTTACCTCTGGGAAACTACCAGCCGCATTTTACAAGATCCAAGATTTAGAAGCTCAAAAGTTTGTTGGAAAATGTTTGGCAAATGTAACAGAGAGGTTGTCAGCAAAAGACCTCTTGTTGGACCCATTTTTAGCAACGGCCCAATGTGACTCACCATTGCCTAGTCCAACATTACCTAGCAAAAATTCTCAAAAACTCAATTTCAATGCAACAATGGCCAAAGAGAAACTTTCACTGAATGTTCAAACAAAGAGCACACATATGACAATCACAGGGACCATGAATGAAGAGGATGACAATGTTTTCCTTAAAGTCAAAATTTCAAACAAAAATGGGCACACAAGAAACATATACTTTCCATTTGACATAAGAAATGACACTGCAATTGAGGTTGCAAATGAGATGGTCAAAGAACTTGAAATTAGTGACTTAGAACCACTAGAGATTGCTGAAATGATTGAAGAAGAGATATCAACTATAGTTCCAACATGGAGGAGTTGTGACACTTCTAAGTATCAAAGACATCATAGTTTTAACTATGGAGAAGAGGATGATATTCCTTTCTTCTCACCATCTTCTCGTTCTTCATCTCATGGTTCTCTTCCTATGTTTTGTGCTTCCTTCAATAACAATACACACCTTTGTGGGAACCATTATCCCCTTGCTCAAGATTGGTCACAAGATGATCATCAATTTATGAATGATGATACAAGCTCTCAAAGCTCAATCAATTCCTACAAGTGTTTCAATTTCCATTGCAATGACTCATGCAATGAAGATGAACAAGGTTCAACTCATATAATAGGAGAAGAATCCTTTTGTTGCAATCAAAAGGGTAACAGCAAATCAACAAGATTTTGTCCTCCTTTAGAAATGGTGGATGCTGGTTTCATCAAACAATTTTCCAACATGAGAATGAATTCTCACACTCACACTCATAGGAATCATCATGGACCAAACAATAGATGTCCAAGTACAAGGTTGACAAGGATTAATTCATGTGTTGATGTGAGGAAACAACAATTACAACGATCATTGATGGAAGAGATGCAAAAGAGAAGAATGTTTAATACAGTTGGTGCTATTGAGAATATTGGATTTCAAAATCCAGAAGGAGATGGATGTTTTTCTTGTTGA 1851 0.3787 MYKGRIGGKAQPGYVETDPSGRYGRFRDVLGKGATKVVYKAFDEILGIEVAWNQIKLDEVFHSPDQLQRLYSEVHLLKNLDHDSIITFHGTWIDADCRTFNFITELFTSGTLREYRKKYPRVDVRAIKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFVNGNMGKVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEEYTELVDIYSFGMCMIELFTSEFPYSECSNPAQIYKKVTSGKLPAAFYKIQDLEAQKFVGKCLANVTERLSAKDLLLDPFLATAQCDSPLPSPTLPSKNSQKLNFNATMAKEKLSLNVQTKSTHMTITGTMNEEDDNVFLKVKISNKNGHTRNIYFPFDIRNDTAIEVANEMVKELEISDLEPLEIAEMIEEEISTIVPTWRSCDTSKYQRHHSFNYGEEDDIPFFSPSSRSSSHGSLPMFCASFNNNTHLCGNHYPLAQDWSQDDHQFMNDDTSSQSSINSYKCFNFHCNDSCNEDEQGSTHIIGEESFCCNQKGNSKSTRFCPPLEMVDAGFIKQFSNMRMNSHTHTHRNHHGPNNRCPSTRLTRINSCVDVRKQQLQRSLMEEMQKRRMFNTVGAIENIGFQNPEGDGCFSC* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1037 616 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 608 - -
Tpr4g1037 616 SUPERFAMILY Protein kinase-like (PK-like) 26 325 IPR011009 -
Tpr4g1037 616 Gene3D - 337 404 - -
Tpr4g1037 616 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1037 616 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1037 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Tpr4g1037 616 CDD STKc_WNK 22 282 - -
Tpr4g1037 616 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Tpr4g1037 616 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1037 616 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Tpr4g1037 616 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 7 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1037 Tpr-Chr4 10021636 10028275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1037 13 423 MAP Kinase Kinase Kinase AT3G51630 68.689 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tpr4g1037 Pkinase 4.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1037 K08867 - gmx:100816187 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1037 4 10021636 10028275 Tpr4g1037 4 10021636 10028275 ECH
Tpr6g2150 6 23220571 23225369 Tpr4g1037 4 10021636 10028275 PCT