Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g1017 | ATGGAGAAACATAAGTGCAAACTTTGTTTCAGAAGTTTCTCTAATGGAAAAGCTTTAGGTGGACACATGAGATCACACATGATGAACCTACCAATTCCACCAAAACAAAACAATTCACCACCACCACCGCCGCCGATGATTCAACTAAGTTTCGAAGCCGATTCGGGTTCATCACCATCATCCTCTTCATTTTATGGTCTAAGAGAGAATCCGAAGCGAAGCTTCCGATTCACAGATCCCAATCAAATCATCGACGGTGGCTCGATAATTCTCCAAGAAGATGGAGATAGCGAAATTGAGTCGTCGAAAAATCCAACCGGTCGACGATCCAAACGTGTTAAGAAAATTGATCCGATGAAGACCTCAATACAGAATAACGAGTCTGTACTGAGTTCTTCATCGGATATAACTACCGAAGAAGACATAGCTTTTTGTCTCATGATGTTGTCTCGCCACAATAACAACAACAACAACAATTGGAAAACACAACATCAAAATCATCAATATCAAGAACAACAAAATCATCATTATCATCAATATCAAGAAGAGGAGGAAGAAGAAGAACAACAATTCAACCAATATCTCGAAGAAGATGAAGAAGAAGACGAAGATGTCGAGGAAGAAGAAGAAGAAGAAAGTGAAGCTGAATCTGAGGAAGAAGAAGAAGAACTGAAACCGTTGAAGAAGGTACGAGGAAGATACAAATGTGACACGTGTAACAAAGTGTTTCGTTCATATCAAGCACTTGGTGGGCATAGAGCGAGTCACAAGAAGAATATGAAATTACTTGCAGAAAATGGTGGTGATTCAATTTCAAACCACCATGACCACAAAAATAAAATTGAAAACAACAATGTTATTGTTAATCATAACAATGTTGAAAAGAGAATTCATGAGTGTCCAATTTGTTTTAGAGAATTTTCCTCTGGTCAAGCACTTGGTGGACATAAGAGAACACATGGTATTGGAATTGGAAATGGAATTGGATCATCAGCACCAGCACCAGCACCAGCACCGGCACCACCAGCAGTAGCAACAACAGCGACGGCGGTTACAACAACAAATGTTCCAACAACCTCAACAGTAAATGTTGAGGTTGTTCGAAGAAGTACCGCGAATTTCGGAGATAATTTGATAGATCTAAATCTTCCTGCTGATATGGATGAAGATGATGATGGTGATGATGTTAGCCAAATTGAAGGCTCTGCTGTTTCCGATGCTGAATTTGTCAAACCTTAA | 1239 | 0.3955 | MEKHKCKLCFRSFSNGKALGGHMRSHMMNLPIPPKQNNSPPPPPPMIQLSFEADSGSSPSSSSFYGLRENPKRSFRFTDPNQIIDGGSIILQEDGDSEIESSKNPTGRRSKRVKKIDPMKTSIQNNESVLSSSSDITTEEDIAFCLMMLSRHNNNNNNNWKTQHQNHQYQEQQNHHYHQYQEEEEEEEQQFNQYLEEDEEEDEDVEEEEEEESEAESEEEEEELKPLKKVRGRYKCDTCNKVFRSYQALGGHRASHKKNMKLLAENGGDSISNHHDHKNKIENNNVIVNHNNVEKRIHECPICFREFSSGQALGGHKRTHGIGIGNGIGSSAPAPAPAPAPPAVATTATAVTTTNVPTTSTVNVEVVRRSTANFGDNLIDLNLPADMDEDDDGDDVSQIEGSAVSDAEFVKP* | 413 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g1017 | 412 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 234 | 261 | IPR013087 | - | |
Tpr4g1017 | 412 | MobiDBLite | consensus disorder prediction | 386 | 412 | - | - | |
Tpr4g1017 | 412 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 298 | 320 | IPR013087 | - | |
Tpr4g1017 | 412 | Gene3D | Classic Zinc Finger | 231 | 320 | - | - | |
Tpr4g1017 | 412 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 26 | IPR013087 | - | |
Tpr4g1017 | 412 | SUPERFAMILY | beta-beta-alpha zinc fingers | 233 | 320 | IPR036236 | - | |
Tpr4g1017 | 412 | MobiDBLite | consensus disorder prediction | 184 | 221 | - | - | |
Tpr4g1017 | 412 | MobiDBLite | consensus disorder prediction | 119 | 135 | - | - | |
Tpr4g1017 | 412 | PANTHER | ZINC FINGER PROTEIN ZAT1-RELATED | 1 | 411 | IPR044303 | GO:0006355 | |
Tpr4g1017 | 412 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 300 | 320 | IPR013087 | - | |
Tpr4g1017 | 412 | MobiDBLite | consensus disorder prediction | 88 | 135 | - | - | |
Tpr4g1017 | 412 | SMART | c2h2final6 | 4 | 26 | IPR013087 | - | |
Tpr4g1017 | 412 | SMART | c2h2final6 | 298 | 320 | IPR013087 | - | |
Tpr4g1017 | 412 | SMART | c2h2final6 | 234 | 256 | IPR013087 | - | |
Tpr4g1017 | 412 | SUPERFAMILY | beta-beta-alpha zinc fingers | 3 | 31 | IPR036236 | - | |
Tpr4g1017 | 412 | MobiDBLite | consensus disorder prediction | 164 | 226 | - | - | |
Tpr4g1017 | 412 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 4 | 31 | IPR013087 | - | |
Tpr4g1017 | 412 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 236 | 256 | IPR013087 | - | |
Tpr4g1017 | 412 | Coils | Coil | 170 | 225 | - | - | |
Tpr4g1017 | 412 | PANTHER | CYS2/HIS2 ZINC-FINGER TRANSCRIPTION FACTOR | 1 | 411 | - | - | |
Tpr4g1017 | 412 | Pfam | C2H2-type zinc finger | 4 | 27 | - | - | |
Tpr4g1017 | 412 | Pfam | C2H2-type zinc finger | 298 | 320 | - | - | |
Tpr4g1017 | 412 | Pfam | C2H2-type zinc finger | 233 | 258 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g1017 | Tpr-Chr4 | 9790433 | 9791992 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g1017 | 1 | 391 | C2H2 Transcription Factor Family | AT2G45120 | 35.122 | 1.14e-46 | 160 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Tpr4g1017 | zf-C2H2_6 | 7e-13 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g1017 | - | - | gmx:100780611 | 281.567 |