Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1012 ATGTACCCAACAAACCTTGTTGTTCTTTCATCTCAGAAGTTGAAAGAATGTACAAACAATTTCAATCTAAGCAATCTCATTGGGCTGACACAATTTGGAAGATTGTTTAGAGGAAACTTTCAAGGTCAACGTGTATTAGTGAAAATATTGGATGATGAAAAATTGAAGCACATAAGTTCTAAATATAATGATGAACATTTCATTATCAAAGAGGAAATGAAGTTTTGGACAAATCCAAATTTGAAAGGTTGTCCTAACTTGACTACTTTCATTGGTTATACTTGTGAGAGAGATATAAAAGGGATTGTGTATGATATTAATCCCCTTGATACTTTGGACAATGTAATCAAGAAAGATGGAATGAATTGGGTTCAGAGAATAGATGTAATTCATGAGGTTGCTAAGCTCTTAAAGTTCATTCATGAGCAAGAGAAACAAAACATGGTGTTGAATATTAGTGCATCTCATATACTTCTTGATAAGGATTTAAAGCCAAAATTATTTGACTTGCTGTTGGTTAGTGAAGTGAAAATGCAAAAGGAACAATCAACAAAGTCAACTAGCTACATTGATCCTTATTTTTCTCCAAGGGCGGGTGGTCATGAATGGGATAGAAGCTGTGAAGTGTATTCATTTGGCATACTTTTGCTTGAACTAATAACAAAGAGAATTTCAAACATTGGGAACAAACAACAAAGCTTAAATATGGATAGTCTAATACATATTTGGGCTAAGAAAGAGTTCAAGCCAAATTGTTCTCTTGTTCATAAACATTTACAAGAAGATTGGCTTTATTGTTCTGAAGATGGTGTTGCAATAACTCTATTGGCTTTGCATTGCATAGAATATTTTCCAACAAATCGTCCTTCAATGAGGGGTGTGTTGCAAAATCTTGAAAATCTTACAGTGTTACAACATTTATCTGATGTTAGATCAACTAAAAGGGAAAAGAAATTCTGA 960 0.3302 MYPTNLVVLSSQKLKECTNNFNLSNLIGLTQFGRLFRGNFQGQRVLVKILDDEKLKHISSKYNDEHFIIKEEMKFWTNPNLKGCPNLTTFIGYTCERDIKGIVYDINPLDTLDNVIKKDGMNWVQRIDVIHEVAKLLKFIHEQEKQNMVLNISASHILLDKDLKPKLFDLLLVSEVKMQKEQSTKSTSYIDPYFSPRAGGHEWDRSCEVYSFGILLLELITKRISNIGNKQQSLNMDSLIHIWAKKEFKPNCSLVHKHLQEDWLYCSEDGVAITLLALHCIEYFPTNRPSMRGVLQNLENLTVLQHLSDVRSTKREKKF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1012 319 Gene3D Transferase(Phosphotransferase) domain 1 109 316 - -
Tpr4g1012 319 ProSiteProfiles Protein kinase domain profile. 21 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1012 319 Pfam Protein kinase domain 24 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1012 319 PANTHER RECEPTOR-LIKE KINASE 4 308 - -
Tpr4g1012 319 PANTHER OS01G0588500 PROTEIN-RELATED 4 308 - -
Tpr4g1012 319 Gene3D Phosphorylase Kinase; domain 1 3 106 - -
Tpr4g1012 319 SMART serkin_6 21 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1012 319 SUPERFAMILY Protein kinase-like (PK-like) 5 299 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1012 Tpr-Chr4 9727279 9729576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1012 12 307 Receptor kinase-like Gene Family AT4G23320 23.127 3.00e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr4g1012 Pkinase 2.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1012 - - gmx:102662076 451.055