Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1001 ATGTTGTCACTACCTCTACTTCTAATTGTTCTGTTCATAATTCTTCCTTTGCTTATGTTCTTCAACAAACATAGGACAAATTATCCACCTGGTCCTAAAGGCCTTCCCATAATAGGAAATCTTCATCAACTAGATATTTCCAATCTTTATAATCAATTTTCACAATTCTCAAAAATATATGGTCCTCTTTTTTCACTTCAACTTGGTTATAGAAAAGCTATTGTTGTTTCTTCAGCTGAAATTGCAAAAGAAGTATTGAAAAATAATGATCATGTGTTTTCTAATAGGCCTAAATTATATGGTCAACAAAAATTGACTTATAATGGGTCAGAAATTGTATTTTCTGAATATGGTGATTTTTGGAGAGAAATAAGAAAAATTTGTGTTGTTCATATATTTAGTTCCAAACGTGTGTCATATTATTCTACTATAAGAAAATTTGAGGTGAAGAAAATGATTCAAAAAATTTCAAGGCATGCAAATTCTTCAAGTGTTACAAATTTGAGTGAATTATTGATTTCACTATCAAGTACTATAATATGTAGAATTGCTTTTGGGAAAAGCTATGAGAATGATGGAAATGAGAAAAGTAGGTTTCATGAAATGTTGCATGAGTTCCAAGCTTTGTTTGCAGAATTCTTTTTTTCTGATTATATTCCATTCACGGGTTGGATTGATAAACTTAAAGGATTGCATGGTCGTCTTGATAGAAATTTCAAGGAGTTTGATGAGTTTTATCAAGAGATTATTGATGAACATTTGGATCCAAATAGAGAATATGTTGTAGATGAGGAAGAAGATATTGTTGATGTCTTACTCCAATTGAAGAAAAAGCATTCATTTTCTTTTGATTTCACTTTTGATCACATCAAAGGCATCCTCGTGGATATGCTTGTAGCCGCAACAGATACCACATCAGCCACAACAGTTTGGGCTATGACTATGTTAATAAAAAATCCAAGAGTACTGAGGAAAGTACAAGAAGAAATTAGAAACACGAGAGTTAAAAAAGAATTTTTAGATGAAAATGATATTCAAAATTTTCCTTATTTCAAGGCACTAATTAAAGAGATACTAAGATTGCACCTACCAGCCCCACTTCTTGTGCCAAGAGAATCAAGGGAAAAATGTATTATAAGTGGCTACGACATTCCAGCTAAGACAATAGTTTATGTGAATGCTTGGGCTATTCAGAGAGACCATAATATTTGGAAAAATCCAGAAGAATTTTATCCTGAAAGATTTTTAGAAAATTCTATAAATTTTATTGGACAAGATTTTGAACTAATACCCTTTGGAGCTGGTCGTAGAATTTGCCCTGGCATGTTTATGGCAGTTGCATCATTGGAACTTATCCTTGCAAATCTTCTCTATTCTTTTGATTGGACATTGCCACGTGGATTAGTAAAGGAAGATATTGATACAGAAATGCTGCCTGGGATCACTCAACACAAGAAGAATCCTCTTTGTCTTGTTGCTAATATTCATATATAG 1494 0.3226 MLSLPLLLIVLFIILPLLMFFNKHRTNYPPGPKGLPIIGNLHQLDISNLYNQFSQFSKIYGPLFSLQLGYRKAIVVSSAEIAKEVLKNNDHVFSNRPKLYGQQKLTYNGSEIVFSEYGDFWREIRKICVVHIFSSKRVSYYSTIRKFEVKKMIQKISRHANSSSVTNLSELLISLSSTIICRIAFGKSYENDGNEKSRFHEMLHEFQALFAEFFFSDYIPFTGWIDKLKGLHGRLDRNFKEFDEFYQEIIDEHLDPNREYVVDEEEDIVDVLLQLKKKHSFSFDFTFDHIKGILVDMLVAATDTTSATTVWAMTMLIKNPRVLRKVQEEIRNTRVKKEFLDENDIQNFPYFKALIKEILRLHLPAPLLVPRESREKCIISGYDIPAKTIVYVNAWAIQRDHNIWKNPEEFYPERFLENSINFIGQDFELIPFGAGRRICPGMFMAVASLELILANLLYSFDWTLPRGLVKEDIDTEMLPGITQHKKNPLCLVANIHI* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1001 497 Pfam Cytochrome P450 29 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 Gene3D Cytochrome P450 21 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Tpr4g1001 497 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 6 495 - -
Tpr4g1001 497 Coils Coil 323 343 - -
Tpr4g1001 497 PANTHER CYTOCHROME P450 71B11-RELATED 6 495 - -
Tpr4g1001 497 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 SUPERFAMILY Cytochrome P450 29 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1001 497 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1001 Tpr-Chr4 9602270 9607266 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1001 6 497 Cytochrome P450 AT4G31500 46.693 1.06e-169 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1001 - - gmx:100778293 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1001 4 9602270 9607266 Tpr4g1001 4 9602270 9607266 ECH