Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0996 ATGTTGTCACTACTATTCCTATTTGTTCTTTGCCTAATTCTTCCATTGTTGGTGTTCTTCCAAAAACATAGTACCATTACACATAATCCACCTGGTCCTAAAGGCCTTCCCATAATAGGGAATCTTCATCAACTAGATATTTTAAATCTTTATCTTCAATTTTCTCAATTCTCAAAAATATATGGTCCACTATTTTCACTTCAACTTGGTTTTAGAAAAGCTATTGTTGTTTCTTCAGCTGAAATTGCAAAAGAAGTATTGAAAACCAATGATCATGTGTTTTCTAATAGGCCTAAGTTATATGGCCAACAAAAATTAACTTATAATGGGTCAGAAATTGTATTTTGTCATCAATATGGTGATTTTTGGAGAGAAATGAGAAAAATTTGTGTTGTTCATATATTTAGTTCCAAACGTGTGTCATATTATTCTTCTATAAGAAAATTTGAGGTGAAGAAAATTATTGAAAAAATTTCAAGGCATGCTACTTCTTCAAGTGTTACAAATTTGAGTGAGTTATTGATTTCACTCTCAAGTACTATAATATGTAGAATTGTTTTTGGGAAAAGCTATGAGAATGATGAAAATGAGAAAAGTAGGTTTCATGAAATGTTGCATGAGTTTCAAGCTTTGTTGGCAGAAGTCTTCGTATCCGATTATATTCCATTTATGAGTTGGATTGATAAACTCAGAGGATTGCATGGTCGTCTTGATAAAAATTTCAAGGAGTTTGATGAGTTTTTTCAAGAAATTATTGATGAACATTTGGATCCCAATAGAGAACATGGTGCAGATGAAGAGGTTATGGTTGATGTCTTGCTCCAATTGAAGAATCAACATTTGTCATCAATTGATCTCACTTTTGATCATATCAAAGGCGTCCTCGTGGATATGCTTGTAGCTGCGATAGATACCACATCAGCCACATTAGTTTGGGCTATGACTGCCCTAATACGAAACCCAAGAGTAATGAAGAAAGTACAAGAGGAAATTAGAAACTTGGGAGGTAAAAAGGATTTCTTAGATGAAAATGAAATTCAAAATTTTCCTTACATGAACGCCGTGATAAAAGAGACACTGAGATTTTACCTACCAGCTCCACTACTTGTGCCAAGAGAATCAAGGGAACAATGCACTATAAGTGGTTACAACATTCCAGCCAACACAATAGTTTATGTGAATGCTTGGGCTATTCAGAGAGATCCAAATATTTGGAAAAACCCGGAAGAGTTTTATCCAGAGAGATTTTTAGAGAGTTCTATAAATTTTTTGGGGCAAGATTTTGAACTAATTCCCTTTGGCGCGGGTCGTAGGATTTGCCCAGGTATGTCTTTGGGAGTTGCATCATTAGAAATTATCCTTGCTAATCTTCTCTTTTCCTTTGATTGGGAATTGCCAAATGGGTTGGTAATTGAAGATATTGATGATGAAATGTTGCCTGGGATCACTCAACACAAGAAGAACCCTCTTTGCCTTGTTGCCAAGATCCCTTCGGTATAG 1500 0.3493 MLSLLFLFVLCLILPLLVFFQKHSTITHNPPGPKGLPIIGNLHQLDILNLYLQFSQFSKIYGPLFSLQLGFRKAIVVSSAEIAKEVLKTNDHVFSNRPKLYGQQKLTYNGSEIVFCHQYGDFWREMRKICVVHIFSSKRVSYYSSIRKFEVKKIIEKISRHATSSSVTNLSELLISLSSTIICRIVFGKSYENDENEKSRFHEMLHEFQALLAEVFVSDYIPFMSWIDKLRGLHGRLDKNFKEFDEFFQEIIDEHLDPNREHGADEEVMVDVLLQLKNQHLSSIDLTFDHIKGVLVDMLVAAIDTTSATLVWAMTALIRNPRVMKKVQEEIRNLGGKKDFLDENEIQNFPYMNAVIKETLRFYLPAPLLVPRESREQCTISGYNIPANTIVYVNAWAIQRDPNIWKNPEEFYPERFLESSINFLGQDFELIPFGAGRRICPGMSLGVASLEIILANLLFSFDWELPNGLVIEDIDDEMLPGITQHKKNPLCLVAKIPSV* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0996 499 Gene3D Cytochrome P450 20 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Tpr4g0996 499 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 496 - -
Tpr4g0996 499 PANTHER CYTOCHROME P450 71B11-RELATED 4 496 - -
Tpr4g0996 499 SUPERFAMILY Cytochrome P450 30 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 Pfam Cytochrome P450 30 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0996 499 Coils Coil 324 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0996 Tpr-Chr4 9554321 9558784 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0996 5 493 Cytochrome P450 AT4G31500 45.749 2.65e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0996 - - gmx:100801312 668.307