Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0991 ATGAAATTCAAGCTAGGCAAGAAGGTAACTCGGGTCACTCGATGGATCTTCCGAAGATTCCGGACCCGACCCAAATACCGTCGTCTCGGCGCCTCACCGGAAAAGAGTCACCTGACAACGAAGCTTCTAACATGGGGTCGGAATTTAACTACAAAAGCAAAGTCTCTATGTTCCAAAAAAGGGTTGGGTCGGTCGGCTTATTTACCGGTTGGAAAGGACCCGGTTCAGGAAAACGGTTCACCGGTTCCGAAGGGTCATTTAGCGGTTTACGTGGGTCAAAAAGACGGTGAGTTTCGTCGGGTTTTGGTGCCGGTGGTTTATTTCAACCACCCTTTGTTCAGTGAATTGTTGAAAGAAACTGAAAAAGAATATGGGTTTTGTCATCAAGGTGGAATCACGATTCCTTGTCGGGTTACGGAGTTTGAACAGGTTAAGACCCGGATTGCTTCTGGGTCGGGTTTAAGGAGATTGGGTCGGCGGAGGTATTTATGA 492 0.4776 MKFKLGKKVTRVTRWIFRRFRTRPKYRRLGASPEKSHLTTKLLTWGRNLTTKAKSLCSKKGLGRSAYLPVGKDPVQENGSPVPKGHLAVYVGQKDGEFRRVLVPVVYFNHPLFSELLKETEKEYGFCHQGGITIPCRVTEFEQVKTRIASGSGLRRLGRRRYL* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0991 163 PANTHER SMALL AUXIN-UP RNA-RELATED 3 161 - -
Tpr4g0991 163 Pfam Auxin responsive protein 60 145 IPR003676 GO:0009733
Tpr4g0991 163 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 161 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0991 Tpr-Chr4 9491693 9492894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0991 82 141 Calmodulin-binding Proteins AT3G43120 53.333 4.08e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0991 K14488 - jre:109015678 187.193