Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g0988 | ATGAATATTGAAAAACTGCGTGAATGGGCATTTGGCCAGAACACGGTCACAAATACACACAACCATTCATCATCCAATGTTGAATCTTCATCATCATCGTCATCATCATCATTAATAAACAATGATATGGATAATGTCATAAACCAAAACATGATGATGACAAATGCTAATGCTGCTTCTATAAGTTCTATTCATCTAGATCTCGTTGGAGGCTTATTATCACACTCAGAGCCAACATCGCAGACAAGCAATGTTGCTGCTACAAATAGTGATGAATTTGGTGACGGTAGCAACAATAGGAAGAAGAAGAAGAAGAACAAGAAAAATGTCGATGATGGTAAACTCCGCAGTTTACCGTATAAAAAATATGGACCGTATACGTGTCCAACTTGCAAGATAGTACTAACAACATCTCAAAAGTACGCTAATCATGTGAAATGGATTCATCACAAGGACGGAAAAAAGAAGACATGA | 474 | 0.3692 | MNIEKLREWAFGQNTVTNTHNHSSSNVESSSSSSSSSLINNDMDNVINQNMMMTNANAASISSIHLDLVGGLLSHSEPTSQTSNVAATNSDEFGDGSNNRKKKKKNKKNVDDGKLRSLPYKKYGPYTCPTCKIVLTTSQKYANHVKWIHHKDGKKKT* | 158 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g0988 | 157 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 128 | 150 | IPR013087 | - | |
Tpr4g0988 | 157 | MobiDBLite | consensus disorder prediction | 75 | 116 | - | - | |
Tpr4g0988 | 157 | MobiDBLite | consensus disorder prediction | 75 | 94 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g0988 | 112 | 152 | C2H2 Transcription Factor Family | AT5G22990 | 58.537 | 1.04e-12 | 62.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Tpr4g0988 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g0988 | - | - | mtr:MTR_3g084720 | 65.4698 |