Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0988 ATGAATATTGAAAAACTGCGTGAATGGGCATTTGGCCAGAACACGGTCACAAATACACACAACCATTCATCATCCAATGTTGAATCTTCATCATCATCGTCATCATCATCATTAATAAACAATGATATGGATAATGTCATAAACCAAAACATGATGATGACAAATGCTAATGCTGCTTCTATAAGTTCTATTCATCTAGATCTCGTTGGAGGCTTATTATCACACTCAGAGCCAACATCGCAGACAAGCAATGTTGCTGCTACAAATAGTGATGAATTTGGTGACGGTAGCAACAATAGGAAGAAGAAGAAGAAGAACAAGAAAAATGTCGATGATGGTAAACTCCGCAGTTTACCGTATAAAAAATATGGACCGTATACGTGTCCAACTTGCAAGATAGTACTAACAACATCTCAAAAGTACGCTAATCATGTGAAATGGATTCATCACAAGGACGGAAAAAAGAAGACATGA 474 0.3692 MNIEKLREWAFGQNTVTNTHNHSSSNVESSSSSSSSSLINNDMDNVINQNMMMTNANAASISSIHLDLVGGLLSHSEPTSQTSNVAATNSDEFGDGSNNRKKKKKNKKNVDDGKLRSLPYKKYGPYTCPTCKIVLTTSQKYANHVKWIHHKDGKKKT* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0988 157 ProSitePatterns Zinc finger C2H2 type domain signature. 128 150 IPR013087 -
Tpr4g0988 157 MobiDBLite consensus disorder prediction 75 116 - -
Tpr4g0988 157 MobiDBLite consensus disorder prediction 75 94 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0988 112 152 C2H2 Transcription Factor Family AT5G22990 58.537 1.04e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr4g0988 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0988 - - mtr:MTR_3g084720 65.4698