Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0940 ATGGCGAATCACGATGATTTCACACACGACGTTTTTCTCAGTTTCAGAGGCGGAACACGCTACTCCTTCACCGATCATCTCTACCATTCACTTCTCGGTCGCGGAATCAATGTTTTCAGAGACGATCAAAATATCAAGATCGGCGATGAAATCGGTCCTTCACTTCTACATGCAATCGAAGCTTCTAGAATCTCAATCGTTGTTCTCTGTAAAGACTATGCTTCTTCCAGTTGGTGCCTTGATGAACTTGTTAAGATTGTTGACTGTTACGAAAATAATGGAAAATCTGTTTTTGTTATATTTTATAAGGTTGAACCTTCTGATGTTAGGCATCAGAGAAATAGTTATGAAATTGCTATGATTGAACATCAGAGAAGATTTGGAAGTGAATCTGAGAAAGTGAAAGCATGGAGGTCAGCTTTGAATAGAGTTTGTGCTCTTAGTGGACTTCATTGCAAGGACGATATCTATGAATCTAAGTTTATTGAGAAGATTGTCAAAGACATCTCAGCTAAACTACCTCCCATGCCTTTACAAATCAAACACCTAGTCGGAATCAATTCTCGTTTCGAACAAGTGAAATCTCTTATGGATACTGATTCTGATGACGCAGTTTGCATGTTGGGAATTTATGGAGCTGGCGGAATAGGCAAAACAACATTGGCCTTGGACATATATAACAAGATCAGACGTCAATTTGTAGCTGCAAGTTTTCTTGCTAATGTTAGAGAAAAATCCAAAGAGAGCACAAGGGGCCTAGAGGATCTCCAAAAAACACTTCTGTATGAGACGGGTGACAAAACGCAGACTATGTTAGGAAGCACATTTACAGGAAGCTCTGAAATAAAAGGCAGGCTTGCCAAAAAAAGAGTTCTTCTCATACTCGATGATGTTGATTCGGTAGAACAATTGAAATCACTAGCTGGAGGACATGATTGGTTTGGTCCAGGTAGTAGAATCATTGTAACAACAAGAGATATAGATGTTCTACAGAAGCATGATGTTAAAATTAAAACATATAAACTCGAAGAGCTAAATCATCATGAATCCATTGAACTCTTTTGTTGGCATGCCTTTAATATGAGCAGACCAATAGATAACTTTGCAAATATATCTTCTCATGCAATAAGTTATGCAAAGGGTATTCCATTGGCTTTAAGAGTGATAGGATCCAATTTAAGAGGTAAGAGCATAGAGGAATGTGATGTTGAAATTCAAAGATATAGAATGATTCCAGATGCCGAGATTCAAGGTGTACTTGAAATAAGCTACAAATGTCTATCTGACTTGGAACAAAAGGTTTTTCTAGACATTGCTTGTTTTTTCAAAGGGGAAAGATGGGAGTATGTTAAAAGGATACTAGATGCTTGTGGTTTCAACCCAGATATACGAGTATTTGTTAACAAATGTCTCATAACTGTTGATGAAAATGGTTGTTTAGAAATGCATGATCTAATACAAGACATGGGTAGAGAGATTGTTCGGAAGGAATCAGCATCAAACCCTGGAGAACGCAGTAGATTATGGTCTCATAATGATGTTCTGGATGTACTGAAAGGAAACTGGGGGAGTAGTGCAGTTGAAGGCATAATGCTTCATCCCCCAAAACAAGAAAAAGTAGATCATTGGGATTATACTTGCTTTGAGAAGATGAAAAACCTCAGAATTTTGATTGTTAGGAATACATTATTTTCATTAGGACCTAGTTGTTTGCCGAATACCTTACGGCTACTTGATTGGAAGTGTTACCCGTCAAAGGATTTTCCTCCAAATTTTTATCCATACAGAATTGTTGACTTCAAATTACCTCATAGCTCTATGATATTGAAAAAGCCCTTTCAGATTTTTAAGGATTTAACATTCATCAATCTCTCCCATAGTCAATCCATAACTCAAATTCCTGATCTTTCTGGAGCTACAAGCTTAAGAGTGTTTACAGTTGATAAATGCCATAGATTGATAAAATTTGATATATCCATTGGATTTATGCCTAATCTGGTGTATTTAAGTGCTTATGGGTGCACTGAGCTCAAAAGTTTTGTGCCAAAAATGTATTTGCCCTCCCTTCAAGTGCTTTCATTTAATTTCTGCAAAAAGCTTGAACACTTCCCACATGTAATGCAAAAGATGGATATGCCATTAAAGATGCACATGATAAGCACTGCCATTAAGCAGTTTCCAAAGTCCATTGATAACCTTACAGGGCTTGAGTATATAGACATGTCATTTTGCAAAGCACTCATAGATCTATCAAGTAGCTTCTTATCGCTTCCAAAACTGATGACTTTGAAGATTGATGGCTGCTCTCAACTTGGAGAGTCGTTTCAACAGTTCAAAGATCGTCATTCAGTGACAAATGTCTATCCAAATTTAGAAACTCTTCATACTAGCGAGAATAATTTATCATATGAAGATGTTAATGCCATTATAGAAAATTTTCCAAATTTGGAAGACTTGAAAGTATCCCACAATGGGTTCGTAGCCCTCCCAAAATGCATTAGAGGATCTTTTCACTTGAAAAGTCTTGATTGAGCTTTTGTGAGCTTTTGCAGGAATCTTACAGAAGTTCCAGAACTTCCATTAAGTATTCAGAAAATAGATGCAAGACACTGTCAATCCTTAACTTCAGAGGCATCAAGTTTGCTCTGGTCTAAGGTATCACAAGAGATCCAAAGAATACAAGTTGTAATGCCGATGCTGAAAAGGGCGATTCCAGAATGGTTTGACTACAGTTCCACTCAAGAGATTCCACTTTTATGGGCTCGTCATAAGTTTCCTGTTGTTGCTTTAGCATTAGTGTTCCAGGAAGTAAAAAGAACAGACAATGTTTCAAAATTTGCTGATGCTATAAATTTGAAGACTGGAGTCAAAGACTGGCACACTGTTAGACTCCATTTGTTTATTGACGGCCAAGAAATTTGTGGCAAGAATTGCAATTATTTCAATGTTGGGCCAGATCATGTGCTATTGTGTGATCTACGAGTTTTGTTCAATGATGAAGAGTGGCAGGACCTTGATGCAAGTTTTGGAAATGAATGGAAGTCCATTCAGGTCCAATATAACTCAGACTTGATTCTGACTAATTGGGGAGTTTATGTGTACAAGCAAGAAACAAGCATGAATGATATCCTATTTGTACCTCCCAATTGCAATTCATTTTCCTACGCGCCATCATGTTTGGTTCCAAAAGAATATCCGGATCAGAAAATGAAACATATTTTGGAAAGTTTCAATCCAAGAGACATGTATAATGACTATTTGCCTAAAATAGAATCAGAAGAAGGTCCAATCAGGTCTACAAAATTGTTTTTGCAGTGTTTGAGGAATGCCAAGGCTGAAAGTATAGCAGAGGCTTCCTCCTTTTCCTATGGGGCAAGTCGAAAGCAAGAACAGGAAGAATGTGTACCGGAGGTGATTAACGTATTAGAGATGTTAAAAGAGGATGCACCAAGACATATTGTTGATTCATATCCTGAGGATCTTCAAACTTCAGGTGTACTTGCAGAAAGATTTATGAGGGCACGAGTGGAATTAATGAAAGAAAATAGCTTGGACATCGGAATGCCTATTATTCTAAACTGTGATGATATACGGGGAGCTAAACACCGACGATTTTGGGGAATCATAGAGATAAAATTGGGAGATCCATTTTACAAACCAGTGTTGAGGAAACTAAACCAACTTTCATGGAAACTTTGGGCAAGTAATGAAGCCTCAAGGTCTAACCTGATGGCCACCGTTGTTGAATTGAAATGCCAGCCTCCAGGTACAGAGGAAACTTCAAGCTCTAGCCTTGAAGAATCCTTGGAGGAAGGATACTATGATCCTGAATTGGAAGAGTTAATGAGGAGGATAGAGCAAGATGCTATGAGTTTGAATAAATCTTATGGGAAAATGAAGGCATCTATTATTCAAACTGATAAGCCAATTTCTAAAAGTTATATATTGGAAGCATTAATCTTTAGAAGACTAGTGAATTCGAGAAAATTGACAATGCTTCGATATCTGACCAAGTTTAAGATCACACCTTATGGGAAGATGAGGGCAGAGGACGATTCTTCTTGCGTTCGGAGGATATATTTATGGGGTTTGAGCTTTGTTCAATTTGTCCAAATCATATGGCCCTATCTTTTCATAAAGTATGCATGCCATTATTTTGTCAGTATACCAATAATTAGGGGTTTGTTGTACAAATTTGTTATTGTTTTGGGGTCGGTGACTTTATTAATATGGGGTTGGTGGTTTGCTGTACAAATTTTTATGTCTTGTAAGAAACTATGCAGGAGGAATAGAAAGATTATTATGACCATAAGGGAAAAGGACATGTAA 4329 0.374 MANHDDFTHDVFLSFRGGTRYSFTDHLYHSLLGRGINVFRDDQNIKIGDEIGPSLLHAIEASRISIVVLCKDYASSSWCLDELVKIVDCYENNGKSVFVIFYKVEPSDVRHQRNSYEIAMIEHQRRFGSESEKVKAWRSALNRVCALSGLHCKDDIYESKFIEKIVKDISAKLPPMPLQIKHLVGINSRFEQVKSLMDTDSDDAVCMLGIYGAGGIGKTTLALDIYNKIRRQFVAASFLANVREKSKESTRGLEDLQKTLLYETGDKTQTMLGSTFTGSSEIKGRLAKKRVLLILDDVDSVEQLKSLAGGHDWFGPGSRIIVTTRDIDVLQKHDVKIKTYKLEELNHHESIELFCWHAFNMSRPIDNFANISSHAISYAKGIPLALRVIGSNLRGKSIEECDVEIQRYRMIPDAEIQGVLEISYKCLSDLEQKVFLDIACFFKGERWEYVKRILDACGFNPDIRVFVNKCLITVDENGCLEMHDLIQDMGREIVRKESASNPGERSRLWSHNDVLDVLKGNWGSSAVEGIMLHPPKQEKVDHWDYTCFEKMKNLRILIVRNTLFSLGPSCLPNTLRLLDWKCYPSKDFPPNFYPYRIVDFKLPHSSMILKKPFQIFKDLTFINLSHSQSITQIPDLSGATSLRVFTVDKCHRLIKFDISIGFMPNLVYLSAYGCTELKSFVPKMYLPSLQVLSFNFCKKLEHFPHVMQKMDMPLKMHMISTAIKQFPKSIDNLTGLEYIDMSFCKALIDLSSSFLSLPKLMTLKIDGCSQLGESFQQFKDRHSVTNVYPNLETLHTSENNLSYEDVNAIIENFPNLEDLKVSHNGFVALPKCIRGSFHLKSLD*AFVSFCRNLTEVPELPLSIQKIDARHCQSLTSEASSLLWSKVSQEIQRIQVVMPMLKRAIPEWFDYSSTQEIPLLWARHKFPVVALALVFQEVKRTDNVSKFADAINLKTGVKDWHTVRLHLFIDGQEICGKNCNYFNVGPDHVLLCDLRVLFNDEEWQDLDASFGNEWKSIQVQYNSDLILTNWGVYVYKQETSMNDILFVPPNCNSFSYAPSCLVPKEYPDQKMKHILESFNPRDMYNDYLPKIESEEGPIRSTKLFLQCLRNAKAESIAEASSFSYGASRKQEQEECVPEVINVLEMLKEDAPRHIVDSYPEDLQTSGVLAERFMRARVELMKENSLDIGMPIILNCDDIRGAKHRRFWGIIEIKLGDPFYKPVLRKLNQLSWKLWASNEASRSNLMATVVELKCQPPGTEETSSSSLEESLEEGYYDPELEELMRRIEQDAMSLNKSYGKMKASIIQTDKPISKSYILEALIFRRLVNSRKLTMLRYLTKFKITPYGKMRAEDDSSCVRRIYLWGLSFVQFVQIIWPYLFIKYACHYFVSIPIIRGLLYKFVIVLGSVTLLIWGWWFAVQIFMSCKKLCRRNRKIIMTIREKDM* 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0940 1441 Gene3D - 7 172 IPR035897 -
Tpr4g0940 1441 ProSiteProfiles TIR domain profile. 7 173 IPR000157 GO:0007165
Tpr4g0940 1441 SUPERFAMILY L domain-like 497 881 - -
Tpr4g0940 1441 Coils Coil 239 259 - -
Tpr4g0940 1441 Pfam TIR domain 9 179 IPR000157 GO:0007165
Tpr4g0940 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 438 IPR027417 -
Tpr4g0940 1441 Pfam NB-ARC domain 191 399 IPR002182 GO:0043531
Tpr4g0940 1441 Gene3D Ribonuclease Inhibitor 544 716 IPR032675 -
Tpr4g0940 1441 Gene3D Ribonuclease Inhibitor 717 894 IPR032675 -
Tpr4g0940 1441 PRINTS Disease resistance protein signature 379 393 - -
Tpr4g0940 1441 PRINTS Disease resistance protein signature 731 747 - -
Tpr4g0940 1441 PRINTS Disease resistance protein signature 207 222 - -
Tpr4g0940 1441 PRINTS Disease resistance protein signature 285 299 - -
Tpr4g0940 1441 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 1122 IPR044974 GO:0006952
Tpr4g0940 1441 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 1122 - -
Tpr4g0940 1441 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 149 IPR035897 -
Tpr4g0940 1441 SMART till_3 8 147 IPR000157 GO:0007165
Tpr4g0940 1441 Gene3D - 344 428 IPR042197 -
Tpr4g0940 1441 Gene3D - 173 341 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0940 Tpr-Chr4 9042563 9048282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0940 23 771 WRKY Transcription Factor Family AT4G12020 31.218 3.95e-83 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0940 - - mtr:MTR_4g023040 2013.81