Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0938 ATGGCAAATTATGAAGAAACATCCTCAAATTTCACACACGATGTTTTCTTGATTTCTTCACCAAATGGAAACAGCAAAACATTTACCGACTACATCTATCAAGCCTTGCTCGACAGTAAGATCACAACAGTCAGATACAGTAGTGATGAAGACATAACAACAACAATGGAGAAATGCAGAATTTCAATGGTTGTGTTGTGTGAAAACTACGCATATTCCACAAAGTGTCTCGATGAACTCGTCAAGATCATTGACTCTTATGATACCAAACGTAAAGAGGTTTGTGTCATTTTTTATAAAGTTGAACCATCGGATGTATGGTTTCAGAAAAATTGCTATGAAAGGAGTTTGATTGAGCATGAGAAAAGTTTGGGACGAGATTCTGAGACTGTAAAAGGATGGAGGATGGCTTTGAGTAGAATCTGTGATCTTGGTGGTCAACATTGCAAGGAAGACAAATATGAATCTGGCTACCTCAGAAAGATTGTTAAAGACACCTCTGCTAAATTACCTCCTCCTGTACCTTCTGAAATTAAGCACCCAATTGGACTTGATTCACGTTTTGAACAGTTGAAATCACTTATAGATATTGAACCTAATAATCCCGTTTGTATGTTGGGAATTTACGGAGAAGCTGGAATAGGCAAAACCACATTGGCCTCTTACTTGTACAACAAAATCAGACATCAATTTGAAGTTGCTAGTTTTCTTACTAACATAAGAGAAAAATCCAACAACAATAACATCATTGATCTAAAAGATCTCCAAAGGACACTTTTGTATGAGACTGTTAAGGAGACGCAGACTGTGGTGGAAACTACATTTGAGGGACACTCTCAAATTAAAGACAAACTTAGACATAAAAGAGTTCTTCTGATTCTCGACGATGTCAATTCGATAGAACAGCTGAAAGCACTAGCTGGTGGATGTGACTGGTTTGGTTCTGGTAGCAGAATTATAACAACAAGGGTTGAGATTGAAACTGAGCTAGATAAGCACCATGCTATAGTATTAGGAAATATAAAATGA 1029 0.3703 MANYEETSSNFTHDVFLISSPNGNSKTFTDYIYQALLDSKITTVRYSSDEDITTTMEKCRISMVVLCENYAYSTKCLDELVKIIDSYDTKRKEVCVIFYKVEPSDVWFQKNCYERSLIEHEKSLGRDSETVKGWRMALSRICDLGGQHCKEDKYESGYLRKIVKDTSAKLPPPVPSEIKHPIGLDSRFEQLKSLIDIEPNNPVCMLGIYGEAGIGKTTLASYLYNKIRHQFEVASFLTNIREKSNNNNIIDLKDLQRTLLYETVKETQTVVETTFEGHSQIKDKLRHKRVLLILDDVNSIEQLKALAGGCDWFGSGSRIITTRVEIETELDKHHAIVLGNIK* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0938 342 Gene3D - 6 166 IPR035897 -
Tpr4g0938 342 PRINTS Disease resistance protein signature 205 220 - -
Tpr4g0938 342 PRINTS Disease resistance protein signature 284 298 - -
Tpr4g0938 342 CDD AAA 182 300 - -
Tpr4g0938 342 Pfam NB-ARC domain 198 323 IPR002182 GO:0043531
Tpr4g0938 342 Pfam TIR domain 50 174 IPR000157 GO:0007165
Tpr4g0938 342 ProSiteProfiles TIR domain profile. 11 170 IPR000157 GO:0007165
Tpr4g0938 342 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 18 327 - -
Tpr4g0938 342 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 322 IPR027417 -
Tpr4g0938 342 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 327 IPR044974 GO:0006952
Tpr4g0938 342 Gene3D - 167 330 IPR027417 -
Tpr4g0938 342 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 142 IPR035897 -
Tpr4g0938 342 SMART till_3 12 144 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0938 Tpr-Chr4 9020258 9034947 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0938 55 322 WRKY Transcription Factor Family AT4G12020 30.258 9.31e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0938 - - cam:101493067 322.398