Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0937 ATGACAAATGATGATGGAACATCATCCAATATTGATTTCTTGTTCTATGATGTTTTCCTAAGTTTCAGAGGCGATGGTGGAACCCGCTACGGATTCACAGATCATCTCTATACTGCACTTCGTCAAAAAGGAATTTTCACTTTCAGAGATGATGAAGAACTCAAAATAGGAGCTGAAATAAGAGTTTCACTTTATAAAGCTATAGAAAATTCAAGAATGTTGGTGGTTGTGCTATGTCAGAACTATGCATCTTCCACTTGGTGTCTTGATGAACTTGCTCATATCATTCACTGTTCCGGTAAAAAAGGGAATCAGGTTTTGATCATATTTTACAAAGTGGAACCTTCTGATGTTTGGAATGTGAAAAATTCTTATGAAGCTGCCATGATTGAGCATGAAAATCGATTTGGGAGAGACTCTGAGAAGGTCAAAGCTTGGAGGAACGCTTTGTCCTCTGTTCGTCACCTACCAAGTCAACACTACAACAACCAAATGTATGAACCTGAGTTTGTCAAGAAGATTGTTGAAGAAACCTCGGCTAAATTACCTCCCGTCCCTTTACCAATGAAACACATAGTTGGACTTGATTCTCGATTTGAAATGGCGAAAACACTTTTCCATTTTGAGTCTCGTGATACCGTTTTAATGCTGGAAATTTACGGAGCTGGGGGAATAGGCAAAACTACATTCGCCGTGGATATCTATAACAAGATCAGGCATCAATTTGAAGCTTCGAGTTTTCTTGCTAGTGTTAGAGAAAAATCAAACAAAAGCACCAAAGGCCTGGAAGATCTCCAGAAGACACTTCTATCTGAGATGGGTGAGGAGACAGAGACAATGATGGGAAGTACTTTTGGAGGTGGACTTGAAATCAAGCGCAGGCTTGGCCATAAAAGAGTTCTTCTAGTTCTTGACGACGTTGATACAATAAACCAACTAGAAGCACTAGTTGGAGGATGTGACTGGTTTGGTCCCGGTAGCAAGATCATCATAACAACAAGGGACACATCATTGGTAGATAAGCATGTGATGGATGGTGCTATCGTTGAAAAATATAAAATGGAAGAGTTGAATGGTCACCACTCTCTGGAACTCTTTTGCTGGCATGCCTTTAATACCAGTAATCCTGAAGAAAACTTTGAAGGTGTTTCTAGTCTTGCTGTGAGTTATGCAAAGGGCGTTCCATTGGCTTTGAAAGTAATAGCCTCCAATGTGAAGGGTGGGAGCCCAATGGACTGGGAAAGGGAATTGGACAAATATAAGAAAATTCCAAATGCTGAGATTCAAGGAGTACTCGAAATAAGCTATATTAGTTTGTTTGAGCTGGACCAGAAAACTTTCTTGGACATTGCTTGTTTCTTTAAAGGGGAGAGATGGGAGTATGTTGAAAGGATACTAAAGGCTTGTGGTTTCTTCCCAAGTATTCGACCATTTGTTACAAAATGTCTCATAAATATTGATGAAAATGGCTGCTTGGATATGCATGATCTAATCCAAAACATGGGCAAAGAGGTTATCAGAAAGGAGTCTCCGCTAAACCTTGGTGACCGTAGCAGATTATGGTCTCATGAGGAAGTTCTTGAAGTACTCAAAGACAACACGATACCGGGAAGTATAAAAATTGAAGGAATAATGCTTGACCCCCCTGCTCATGAAGAAGTGTGTAATTGGAGTGATAATGCCTTCAAGAAGATGGAAAATCTTAGAATTCTAATTATTCGGAATACATCATTTCAATCAGCTCCTAGTTGTTTGCCAAATAGTTTACGGTTACTTGATTGGAAGGGGTACCCATCAAAGTCTTTTCCAGCTGATTTTTATCCCGAAAGAATTGTTGATTTTAAGTTACCTCATAGCTCTCTGATGCTGAAAAGGCCATTTCAGATATTTGACGATTTGACATTCATGAATCTCTCTCAGTGTCAATCCATAACTCAAATACCTGATATCTCAAGAGCCATAAATTTAAGAGTATTGACACTTGATAGATGTCATAAAGTGAAAAGATTTGCTGAATCCGTCGGATTTATGCCAAAACTTGCATGTTTAAGTGCTTCAGAGTGTACAATACTCAAAAGTTTTGTCCCAAGAATGCACTTGCCATCTCTCGAGGTTCTCTCCTTTAATTTGTGCAAAAGACTTAAACACTTCCCAGATGTAATGCAAAACATGGATAAGCCATTAAAGATTTGGATGATAGGTACTGCTGTTAAGAGGCTTCCTAATTCCATTGGTAATCTTACGGGGCTTGAATACATAGACATGTCATTTTGCAGAGGACTTGATGATCTATCCAGCACCTTCTTCTTATTGCCAAAACTTGCCACCTTAAGAATTGATGGTTGTTCTGAACTTAGAAAATCATTTAAAAGGTTCAAAGATATCCACTCAGTAGCGAATGGCAGCTCGAATTTGGTGAGACTGTACTTAAGTGATGCTAATCTATCAGATGAAGATCTTCACATAATTCTTGAAAGTTTTCCAAAATTGGAAGACTTGAATGTGTCGCACAATAAATTTGCATCTCTCCCAAAATCAATCAAAGGATCTGTGCATTTGAAAAGTCTTGATGTGAGTTATTGCAGGAATCTTATAGAAATTCCAGAACTTCCATTGAGCATTCAAAAAGTAGATGCAAGATATTGCGGAAGCTTAACTTCAAAGGCATCAAGCGTGCTATGGTCTAAGGTTTGCAAAGAGAAGAAAAGAATACAAGTTGTGATGCCAAAAACTAAAATTCCAAATTGGTTTGACTGTGTTGGCAATGAAGATATTCCTCTTTTCTGGGCTCGCCGGAAGTTCCCTGTGGTTGCTTTAGCATTGGTGTTTGCGGAATCTGAAGAGAATATTGAGATAGAGAAGGACACCTTCATCTCCGACTTCTTTCCTAAACTGATGTCAGATGTGTCCTACACTGTTGGTCTGCATATATTTATTGATGGTCATGAAGTATCTCGTAAGAATTACCATTACTGTAGTGTTGGGGAAAATCACATGTTAATGTGTGACCTTAGGACTTTGTTCACCGAAGAAGAATGGAAGGGTCTAGATGCATGCGTTGGAGATGATTGGAAGGCTGTTCAGGTTCAATGTGAATCACAGTTGACTTTGAGTTATTGGGGAGTTTATGTTTTCAAACAGAAAACATTCACTCATGATATTGATATCTCATTCAAGCTTCCCAATCTTAATTCCTCTGGTGCGGACTATGTGAAATTGCTAGTGCCGGCATCATGTTTGGTTCCAAAAAGTTCTCCTCAGATGTCTGGCCAAATAATGAGACACACATTGGAAAATACGAATCCAAGAGAAATATTTGGCGAGTATTTTCCTCTTTTAGAGTTTGTTGAAGAAACTCCGTGTTTTACAATGTCACTGTTTAGGTCGTGGATGATTGCTAAGGTTGATAATAAAGGGGAAACTTCAGCCATTGCCTTTGGGGGAAGTTTAAAGCAACAGCATGAAGAATCTAATTGGGATGTTGTGCGATATGTAGAGTTGATGATGAAGGATAAGACTTTAAAACAGCTTGGTGATATGCATGGTTTAAAATTAGATAACAATGACATACAAATTCCGACACAAATTCTGGAAGAAGTGTTGATGGCAAGGGTAGAATTTATGAGGGAAAAAGGTCGTGATGGGTTGGATTTGGATATACCTATTATCCTTGAAGCGTGTCATTTTGGGGAAGCTAAGAGTCGTCGCTATTGGGGGAGGTTGCAAATAAAAAACGGAGATCAAAATTTCAAAGTTGTGTTAAACAAGATATGCCAACTTGCATTGAAATTCTCGAATGCAAAAAGAGCAGGTCTTAGGATGAACATTGTTCTATTGAAATGCCAGAAACCATCGACAGAGATAGCTTCAAATTCAAGCTCTAGCTATGAGGAAGAATACTTTGAGGAAGAGTCCTATGATCCTGCTTTGGAAGAGTTGATGAGCATGATAGAGGAGGATGCTATGCGGTTTAATAAATCCTTTGGGAAGTTGAAAGCATCTATTGTTCTAACAAATACTGCTGAAATAGTTTCTGACAAAAATTTGTTGGAATCTTTATTTCTTAGAGGACAAGAAAATTTGGCAGAAGGAAATCCAGGATGGGGATATTGGGAAATGGGATTGTTTGGATTGGGAATTTTGGGATCTGGGGTTTCAGGATCGGGATTGGAAACTTTAGGATCTGGGATTTCAGGATTGGGAAGGATGGGATCAAATTTCAAGAAGACACATTATGGGAAGTTAAGGGTGGAGGATGAACCTTTTCGCATACTGTGGAGGAAATGTTTTTGGGGTTTGTGTGATGTTCTAAGTAAATGGTCATTTTATTTCATAGTATATGTGTGCCCTTATTTTTATAGGATACCAATAATAAGGAAGTTATTAGTGTGGGGTTGGTGGCTTGTCGAGTGGCCATTTTGTTTCTTTGTATGTGTGTGCCTTGATTTTTACAGGATACCAACACTAAGGAAGTTATTACTGTTGGGTTGGTGGCTTGTCAAGAAAATTTTTGTTCCCAGTATATGGTCATTTAATTTCTTTGCACGTGCGTGCCTTTATTTTTATAGGATACCAACAATAAGGAAGTTATTAGTGTGGGGTTGGTGGCTTGTCAAGCAAATTTTTGTTCCGAGTATATGGTCATTTAATTTCTTTGTACGTGTAATAAGAAAGTTAGTGTGGGGTGGTTGGTGGCTTGTCAAGCAAATTTGTTTGTCTTGTAAAAAATTACACAGGGGAATTGCAGATTCTTCTTTTGAAGATCGTCAAATTGCATTCGGAGTTGCAAAAAGAATATTGAGGGCACGGGTAGAATTAATGAAGGAAAATAGCATGGACACTGGTATGCCTATTATTCTAGAGTATATTGGTACATCGGGCGCAACAAATAGACACTTTTGGGGAACTGTGGAGATAAAAGTGGGAGATCCATTTTACAAACCATTGTTTAAGAGGCAAAACCAAATTTCCGGGGGACTTGGGACGTCTGACTCTGACCAGAGGGTAATCATTGTTAAATTGAAATGTCAGCCCGCAAGTGAAGAGGAAGCTTCAAGCTCTCGCCTTGAAGAATCCTTGGAGGACGGAAACTACAATCCTGAATTGGAAGAGTTGATGAAGATGATAGAGCAAGATGCTATGAAATTCAATAAATCTTATGGGAAAATGAAGGCATCTATTGTTCAAGCTGATGAGTCATTTTTTGATAATTATCTAACGGAACCATTACTGATTCTAGGAAAATTGACAATGTTTGGATCAGCGACCAAGTTCAAGGTCACACCTTATGGTAAGATGAGAGCTGCAGACGAACCTTTCCGCATTCTGAGGACATGTTTCTGGGGTTTGATTTTTGTTATGCTTGTCTTATGTATATGGTCATTTAATTTATTTGCACGTGTGTGCCTTTATTTTTATAGGATACCAATAATAAGGAAGTTATTAGTGTGGGGTTGGTGGCTTGCACAGCAAATTTTTCTGTCTTGTAAAAAATTATACGGGGGAAATGGCAAGATTATTGAGAGAATAAAAGTGAAGGAATTGTAG 5547 0.3854 MTNDDGTSSNIDFLFYDVFLSFRGDGGTRYGFTDHLYTALRQKGIFTFRDDEELKIGAEIRVSLYKAIENSRMLVVVLCQNYASSTWCLDELAHIIHCSGKKGNQVLIIFYKVEPSDVWNVKNSYEAAMIEHENRFGRDSEKVKAWRNALSSVRHLPSQHYNNQMYEPEFVKKIVEETSAKLPPVPLPMKHIVGLDSRFEMAKTLFHFESRDTVLMLEIYGAGGIGKTTFAVDIYNKIRHQFEASSFLASVREKSNKSTKGLEDLQKTLLSEMGEETETMMGSTFGGGLEIKRRLGHKRVLLVLDDVDTINQLEALVGGCDWFGPGSKIIITTRDTSLVDKHVMDGAIVEKYKMEELNGHHSLELFCWHAFNTSNPEENFEGVSSLAVSYAKGVPLALKVIASNVKGGSPMDWERELDKYKKIPNAEIQGVLEISYISLFELDQKTFLDIACFFKGERWEYVERILKACGFFPSIRPFVTKCLINIDENGCLDMHDLIQNMGKEVIRKESPLNLGDRSRLWSHEEVLEVLKDNTIPGSIKIEGIMLDPPAHEEVCNWSDNAFKKMENLRILIIRNTSFQSAPSCLPNSLRLLDWKGYPSKSFPADFYPERIVDFKLPHSSLMLKRPFQIFDDLTFMNLSQCQSITQIPDISRAINLRVLTLDRCHKVKRFAESVGFMPKLACLSASECTILKSFVPRMHLPSLEVLSFNLCKRLKHFPDVMQNMDKPLKIWMIGTAVKRLPNSIGNLTGLEYIDMSFCRGLDDLSSTFFLLPKLATLRIDGCSELRKSFKRFKDIHSVANGSSNLVRLYLSDANLSDEDLHIILESFPKLEDLNVSHNKFASLPKSIKGSVHLKSLDVSYCRNLIEIPELPLSIQKVDARYCGSLTSKASSVLWSKVCKEKKRIQVVMPKTKIPNWFDCVGNEDIPLFWARRKFPVVALALVFAESEENIEIEKDTFISDFFPKLMSDVSYTVGLHIFIDGHEVSRKNYHYCSVGENHMLMCDLRTLFTEEEWKGLDACVGDDWKAVQVQCESQLTLSYWGVYVFKQKTFTHDIDISFKLPNLNSSGADYVKLLVPASCLVPKSSPQMSGQIMRHTLENTNPREIFGEYFPLLEFVEETPCFTMSLFRSWMIAKVDNKGETSAIAFGGSLKQQHEESNWDVVRYVELMMKDKTLKQLGDMHGLKLDNNDIQIPTQILEEVLMARVEFMREKGRDGLDLDIPIILEACHFGEAKSRRYWGRLQIKNGDQNFKVVLNKICQLALKFSNAKRAGLRMNIVLLKCQKPSTEIASNSSSSYEEEYFEEESYDPALEELMSMIEEDAMRFNKSFGKLKASIVLTNTAEIVSDKNLLESLFLRGQENLAEGNPGWGYWEMGLFGLGILGSGVSGSGLETLGSGISGLGRMGSNFKKTHYGKLRVEDEPFRILWRKCFWGLCDVLSKWSFYFIVYVCPYFYRIPIIRKLLVWGWWLVEWPFCFFVCVCLDFYRIPTLRKLLLLGWWLVKKIFVPSIWSFNFFARACLYFYRIPTIRKLLVWGWWLVKQIFVPSIWSFNFFVRVIRKLVWGGWWLVKQICLSCKKLHRGIADSSFEDRQIAFGVAKRILRARVELMKENSMDTGMPIILEYIGTSGATNRHFWGTVEIKVGDPFYKPLFKRQNQISGGLGTSDSDQRVIIVKLKCQPASEEEASSSRLEESLEDGNYNPELEELMKMIEQDAMKFNKSYGKMKASIVQADESFFDNYLTEPLLILGKLTMFGSATKFKVTPYGKMRAADEPFRILRTCFWGLIFVMLVLCIWSFNLFARVCLYFYRIPIIRKLLVWGWWLAQQIFLSCKKLYGGNGKIIERIKVKEL* 1849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0937 1848 Gene3D - 356 439 IPR042197 -
Tpr4g0937 1848 Pfam NB-ARC domain 203 406 IPR002182 GO:0043531
Tpr4g0937 1848 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 450 IPR027417 -
Tpr4g0937 1848 SUPERFAMILY L domain-like 553 930 - -
Tpr4g0937 1848 Gene3D Ribonuclease Inhibitor 552 731 IPR032675 -
Tpr4g0937 1848 Gene3D Ribonuclease Inhibitor 732 898 IPR032675 -
Tpr4g0937 1848 SUPERFAMILY "Winged helix" DNA-binding domain 427 531 IPR036390 -
Tpr4g0937 1848 Gene3D - 15 180 IPR035897 -
Tpr4g0937 1848 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Tpr4g0937 1848 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 156 IPR035897 -
Tpr4g0937 1848 Pfam TIR domain 16 182 IPR000157 GO:0007165
Tpr4g0937 1848 PRINTS Disease resistance protein signature 216 231 - -
Tpr4g0937 1848 PRINTS Disease resistance protein signature 294 308 - -
Tpr4g0937 1848 PRINTS Disease resistance protein signature 391 405 - -
Tpr4g0937 1848 PRINTS Disease resistance protein signature 745 761 - -
Tpr4g0937 1848 SMART till_3 15 156 IPR000157 GO:0007165
Tpr4g0937 1848 Gene3D - 181 347 IPR027417 -
Tpr4g0937 1848 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 1113 IPR044974 GO:0006952
Tpr4g0937 1848 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 22 1113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0937 Tpr-Chr4 8958816 8979184 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0937 16 794 WRKY Transcription Factor Family AT4G12020 30.000 1.42e-77 284