Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0935 ATGTCTTCTTCTTCTTCTTCCATAAGCTCTTCTTCAAGAAGCCACAAATCTGATGTGTTTTTGAGTTACCATGACAAAGACGCCTGTATATCTTTTGCATCGGATCTCTATTCAGCTCTCACACAGGCTGGATTTGTTGTTTACATCAACCATAACAATCTTACAAGCGGAGATCAGACAAATTTCTCAGCAATCGAAGCTTCTAGAACTTCTATCATCATTTTCTCAAGTAATTTTGACGCTTCAAAATGGTTTCTGGAAGAACTGGAGCAGATATTGGAGTCTGGTAGAACCATAGGGCAGGTGATTCTGCCTGTGTTCTATGTTGTAGATCCCTCGGATGTACGTCGTCAGATTGGAGATTTTGGAAAAGATTTTGAAGATCTTATTGGACAAAGGATCTTGACGAACAATGAGTCAATGCGTTATAAGGAAGCGCTCATTGAAGCTTCTAGCATTTCTGGATTTCTCGTGATGAGTTCCAGGGACAAAAGTGAAGTTATTAATGACATAGTGCAACATTTGACTCATTTGATAGAAGACAAATTATTTTCCGTTGCTACACACCCAGTGGGAATAGAACCTCGGATGCAAGATGTTATTCAACTATTGACCAATGAACAACCAGAAAAAACCATAATCATAGGGATATGGGGGATAAATGGGGTTGGCAAAACAACAATTGCAAAAGCCACTTATAATCAAATGGGTTGCAGTTTTGAGGGCAAGAGCTTCCTCCTAAATGTTAATGAAATTTGGGAGCAGAGTAATGGCCAAGTTTCTTTACAGCAACAACTTCTTTCAGACATCTACAAAACAACAAATATACAAATAGATAACATTGATACAGGAAAAATGGTATTACGTGAAAGGCTTTGCCGTAAGAAGATATTTCTTGTACTTGACAATGTGAATAAATTGGAACAGTTGAATGTTTTGTGTGGTAGTCGTGAATGGTTTGGTCATGGAAGTAGAATAATTATCACAACAAGTGATAAACATATACTGTGTAGCTTTCAAGTTGACCATGTATATAGAATGAAATATATGGACACTACTGAATCTCTCGAGCTTTTTAGTTGGCACACATTCAAAATTCCGAGTCCTATAGAAAGTTACGCTGACCTTTGTAGAGATGTTGTTGAGTACTGTGGGGGATTGCCACAAGCTCTTGAAGAAATTGGGTCTTTTTTGTTTGGTAAATCTTTAGCGGAGTCAAAGTTTTTGCTGGAGAAACTCAAAACCAATCCCAACGATATGATAATCAGAAAGCTAAGAACAAATTTTGATGATTTACATGTTTATGACAAAAAAATCTTCCTTGATTTAGCTACCCTATTTATTGAGATGGACAAAGATGATTTAATTCAGACATTAAATTACTTTGTGCGTTTCCCGGAAGATGGAATAACAATCCTCGAAGATAAATGCCTTGTAACTATAGATAGCAATAACAGGATTGGAATGCATACTTTGGTACGAGCAATGGGAAAAGAAATCATAAGGCAACAGGGTATGGCTGAGACAAAGATGTACGATGTATTCTTGAGTTTCAAAGGGGAAGACAGTCGAGCAAAATTCATTTCACATCTCTATTCCTCTCTTCAAAATGCTGGGATTTATGTTTTCAAAGACGATGATGGTATTCAACGAGGAGATCGGATCTCAGTTTCATTGTTGCAAGCAATCAATCAGTCTAGAATTTCCATTGTTGTTTTGTCTAGAAATTTTGCTAATTCAAAATGGTGTATGATGGAGTTGGAGAGAATTGTGGAAATAAGTAGAACCAAGGATATGGTGGTTGTGCCTGTGTTCTATGAGGTAGATCCCTCAGAAGTACGTCATCAGACAGGAGAGTTTGGAAAAGCTTTTGAATGTCTTATATCAGCCATATCAGTGGATGAATACACAAAGAGGAACTGGAAAACAGCTCTCAATGAAGTTGGTGGAAGAGCAGGGGTTGTCATCATAAATTCAAGGAATGAAAGTGAGGATATCAAGAAAATAGTTAAACTTGTTACTCATTTGCTAGACAAGACAGAATTATTTGTTGCTGACCATCCAGTAGGAGTAGAATCACGTGTACAAGACGTTATTCAATTACTGAACAGCCAAAAATCAAAAGTTCCTCTAATGCTAGGGATATGGGGCATGGGAGGGATCGGAAAAACAACCATTGCTAAAGCCGTTTATAATAAAATTCGTCATGATTTTGAGGCAAAGAGTTTCCTATTGAATGTCAGGGAAGTTTGGAATCTCGATAATGACAAAGTTTCTCTACAGCAACGACTTCTTACTGACATCTACAAAACTACAAAGATAAAGATAGATACAGTTGAATCAGGAAAGATTATATTACAGGAAAGACTTTGTGAGAAAAGGATATTTCTTGTAATCGATGATGTGAGTAATGTGGATCAATTGAATGCTTTGTGTGGAAATCGAAAATGGTTTGCTGAGGGAAGTAGAATAATCATCACAACAAGAGATGATGATTTACTTAGTAGGCTTGAAGTTGACCAAGTATACAGAATGAAGGAAATGGATGACAGTGAATCTCTCGAGCTTTTCAATTGGCATGCATTCAAGCAACCAATTTCTGGAGAAGGTTTTACTAACCTTTCTAGAGATGTTGTTAAGTACTCTCGAGGACTGCCGCTAGCTCTTCAAGTCATTGGGTCCTTTTTGTTGACTAGGAGAAGGGAAGCGGAGTGGAAGAGTGTACTGGGGAAACTCAAAATGATTCCCAATGATGAAGTGTCAGAGAAGCTCAGAATAAGTTTTGATGGTTTAAGTGATGATGATGTGAAAGATATATTCCTTGATATTGCTTTTTTCTTTATTGGTATGGATCGGGAAGACGTAACTGAGATATTAAAAGACTGTGGGCATTTTCCAGAAATTGGAATAAGCATTCTGGTACAACAAAGCCTTGTAACTGTTGATAGGAAAAACAAGATTGGAATGCACGATTTGCTACGAGATATGGGAAGAGAGATTGTCCGCAAGAAATCTAAAGAGAGGGGCAAGGAGCCTAGTAGAATATGGCGTTTTGAGGATGTGCATGAGTTGTCAAAAGATACTTGTACTTTAGATGTTAAGGGATTGACTTTAACGATGTCAAGAATGGACTCAACAACTTTGGAAACCAAAGCATTTGAGAAGATGGACAAGCTTAGATTGCTTCAACTTTCTGGCGTACAACTTGATGGAGATTACAAATATCTTTCAAGACATCTTAGGTGGCTTAGTTGGCATGGATTCCCCTTCAAATTTACACCCGCAGACTTTCATCAAGATAGTCTAGTTGCTATCGAGTTGAAATATTCCAATCTGGAACGAGTGTGGAGGAAGTCTCAGTTGTTGGTGAAGCTGAAAATTCTTAATCTTAGTCATTCTCACAACTTGAGACATACACCAGACTTTTCGAACTTGCCAAATCTTGAAAAGTTAATACTTAAGGATTGTCCAAGTTTGTCTTCAGTTTCTTCTAGTATAGGACATCTCAAAAAAATCCTGTTAATAAATTTGAAAGATTGTACAGGCCTTTGTGAACTTCCAAGGAGCATCTATAAGTTAGACTCGGTGAAAACTCTCATTCTATCTGGATGTACAAACATTGTCAAGTTGGAAGAGGATATAGAACAAATGAAATCTTTAACCACACTGGTTGCGGATAACACTGCTATAACAAGAGTTCCCTTTGCAGTAGTAAGATTAAAAAGCATCGCATATATTTCCCTTTGTGGCTATGAGGGATTCACACGTGAAGTGTTTCCTTCTATTATCCAGTCTTGGTTGTCTCCAACAAATAGTATCCTATCCTTAGTTCAAACATTTGCAGGAACTTCATGTCTTGATATCACTGATGAACAGAATAATAGTTTCTATTGTCTATCATCCATTTTTGAAGACCTTCAGAATCTTCAACGTCTTTGGTTGAAATGTGATTCAGAAGCTCAATTAAATCAAACTGTAGCAAGTATTTTGGGTAGCTCCAACACACGAAATTGTGAGGGATTCTCAAACATCGGGACTTCAGCATCAATTCATTCCCGTAGTCAATTTAGTATGTCAAGCTCTAAAAATTCTTTGACATCCGTTTTGATTCAAATGGGAGTGAGCTGCAATGTCGCCAACATTCTTAGAGAAAATATTTTGCAGAAAATTCCTCCCATTGGGTCTGGTTTACTCCCGGGGAACAACTATCCCGATTGGCTAACCTTCAATAGCAACGGTTCTTCTGTAACTTTCGAAGTACCTCAAGTGGAAGGGCGTTCTTTGAAGACAATCATGTGCATTGCCCATTCTTCTTCCCCAGACAATACAACGACAGAAGGTTTCAAAGTTGTGTTGGTAATAAATTGCACAAAGAACACCATTCAGGTCTACAAAATAGGCGCATTATTAGCATCTTTTGGTGAGGATGAGTGGAAGAGAGTAATATCAAATATAGAACCCGGCAACAAAATTAAGGTGATTGTTGTTTTTACAAATGAATTCATTGTGAAGAAAACAACAATTTATCTTGTATATGATGAACCAAGTGAGGAAAAGACGAATCACTGCCATGAGTTAGATGAGAATGGAATTGTTTCTAGTGGTGATGAAAATATATTTGGTAGACTCTTCTTCGCTATTCCTTCCCTTTCTCGGACTGTTCTGACTTCACGGCCTTTCTGGTTCTGTTTGGCTGGTATTATGGTTTGGTCGTCTCGCCGCCGTTCTGAAAAACGAAGAAGAGACAACCCTATTCTAAGGGAAGTAGCATCCATGAGCTCTCAAGGACTCAATATTCCAGAATCTTTGGAGAAAAACCCTTTGGTTGATGTCAAGTAG 4839 0.3778 MSSSSSSISSSSRSHKSDVFLSYHDKDACISFASDLYSALTQAGFVVYINHNNLTSGDQTNFSAIEASRTSIIIFSSNFDASKWFLEELEQILESGRTIGQVILPVFYVVDPSDVRRQIGDFGKDFEDLIGQRILTNNESMRYKEALIEASSISGFLVMSSRDKSEVINDIVQHLTHLIEDKLFSVATHPVGIEPRMQDVIQLLTNEQPEKTIIIGIWGINGVGKTTIAKATYNQMGCSFEGKSFLLNVNEIWEQSNGQVSLQQQLLSDIYKTTNIQIDNIDTGKMVLRERLCRKKIFLVLDNVNKLEQLNVLCGSREWFGHGSRIIITTSDKHILCSFQVDHVYRMKYMDTTESLELFSWHTFKIPSPIESYADLCRDVVEYCGGLPQALEEIGSFLFGKSLAESKFLLEKLKTNPNDMIIRKLRTNFDDLHVYDKKIFLDLATLFIEMDKDDLIQTLNYFVRFPEDGITILEDKCLVTIDSNNRIGMHTLVRAMGKEIIRQQGMAETKMYDVFLSFKGEDSRAKFISHLYSSLQNAGIYVFKDDDGIQRGDRISVSLLQAINQSRISIVVLSRNFANSKWCMMELERIVEISRTKDMVVVPVFYEVDPSEVRHQTGEFGKAFECLISAISVDEYTKRNWKTALNEVGGRAGVVIINSRNESEDIKKIVKLVTHLLDKTELFVADHPVGVESRVQDVIQLLNSQKSKVPLMLGIWGMGGIGKTTIAKAVYNKIRHDFEAKSFLLNVREVWNLDNDKVSLQQRLLTDIYKTTKIKIDTVESGKIILQERLCEKRIFLVIDDVSNVDQLNALCGNRKWFAEGSRIIITTRDDDLLSRLEVDQVYRMKEMDDSESLELFNWHAFKQPISGEGFTNLSRDVVKYSRGLPLALQVIGSFLLTRRREAEWKSVLGKLKMIPNDEVSEKLRISFDGLSDDDVKDIFLDIAFFFIGMDREDVTEILKDCGHFPEIGISILVQQSLVTVDRKNKIGMHDLLRDMGREIVRKKSKERGKEPSRIWRFEDVHELSKDTCTLDVKGLTLTMSRMDSTTLETKAFEKMDKLRLLQLSGVQLDGDYKYLSRHLRWLSWHGFPFKFTPADFHQDSLVAIELKYSNLERVWRKSQLLVKLKILNLSHSHNLRHTPDFSNLPNLEKLILKDCPSLSSVSSSIGHLKKILLINLKDCTGLCELPRSIYKLDSVKTLILSGCTNIVKLEEDIEQMKSLTTLVADNTAITRVPFAVVRLKSIAYISLCGYEGFTREVFPSIIQSWLSPTNSILSLVQTFAGTSCLDITDEQNNSFYCLSSIFEDLQNLQRLWLKCDSEAQLNQTVASILGSSNTRNCEGFSNIGTSASIHSRSQFSMSSSKNSLTSVLIQMGVSCNVANILRENILQKIPPIGSGLLPGNNYPDWLTFNSNGSSVTFEVPQVEGRSLKTIMCIAHSSSPDNTTTEGFKVVLVINCTKNTIQVYKIGALLASFGEDEWKRVISNIEPGNKIKVIVVFTNEFIVKKTTIYLVYDEPSEEKTNHCHELDENGIVSSGDENIFGRLFFAIPSLSRTVLTSRPFWFCLAGIMVWSSRRRSEKRRRDNPILREVASMSSQGLNIPESLEKNPLVDVK* 1613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0935 1612 Gene3D Ribonuclease Inhibitor 1004 1334 IPR032675 -
Tpr4g0935 1612 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 506 IPR044974 GO:0006952
Tpr4g0935 1612 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 520 1502 IPR044974 GO:0006952
Tpr4g0935 1612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 674 943 IPR027417 -
Tpr4g0935 1612 ProSiteProfiles TIR domain profile. 15 175 IPR000157 GO:0007165
Tpr4g0935 1612 Gene3D - 178 344 IPR027417 -
Tpr4g0935 1612 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 127 IPR035897 -
Tpr4g0935 1612 SMART till_3 511 651 IPR000157 GO:0007165
Tpr4g0935 1612 SMART till_3 16 153 IPR000157 GO:0007165
Tpr4g0935 1612 PRINTS Disease resistance protein signature 712 727 - -
Tpr4g0935 1612 PRINTS Disease resistance protein signature 789 803 - -
Tpr4g0935 1612 PRINTS Disease resistance protein signature 882 896 - -
Tpr4g0935 1612 PRINTS Disease resistance protein signature 1120 1136 - -
Tpr4g0935 1612 SUPERFAMILY L domain-like 989 1316 - -
Tpr4g0935 1612 Gene3D - 9 177 IPR035897 -
Tpr4g0935 1612 Pfam NB-ARC domain 692 914 IPR002182 GO:0043531
Tpr4g0935 1612 Pfam NB-ARC domain 196 415 IPR002182 GO:0043531
Tpr4g0935 1612 Pfam TIR domain 18 175 IPR000157 GO:0007165
Tpr4g0935 1612 Pfam TIR domain 512 673 IPR000157 GO:0007165
Tpr4g0935 1612 Gene3D - 506 681 IPR035897 -
Tpr4g0935 1612 ProSiteProfiles TIR domain profile. 510 677 IPR000157 GO:0007165
Tpr4g0935 1612 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 25 506 - -
Tpr4g0935 1612 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 520 1502 - -
Tpr4g0935 1612 SMART AAA_5 211 348 IPR003593 -
Tpr4g0935 1612 SMART AAA_5 709 849 IPR003593 -
Tpr4g0935 1612 Gene3D - 682 843 IPR027417 -
Tpr4g0935 1612 Gene3D - 350 433 IPR042197 -
Tpr4g0935 1612 Gene3D - 847 932 IPR042197 -
Tpr4g0935 1612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 443 IPR027417 -
Tpr4g0935 1612 SUPERFAMILY Toll/Interleukin receptor TIR domain 507 653 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0935 Tpr-Chr4 8923614 8945863 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0935 12 504 WRKY Transcription Factor Family AT4G12020 29.200 2.57e-43 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0935 - - mtr:MTR_7g088950 1909.03