LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr4g0934	ATGGCGAATCACAATGAATTCGCACACGACGTTTTTCTAAGTTTCAGAGGCGGAACACGCTACTCCTTCACCGATCATCTCTTCCGTTCTCTTCTCCGTCACGGAATCAACGTTTTCAGAGACGATCAAAACCTCAAAATCGGCGACGAAATCGGTCCTTCACTTCTACAAGCAATCGAAGCTTCTAGAATCTCAATTGTTGTTCTCTGTAAAGACTACGCTTCTTCTAGTTGGTGCCTTGATGAACTTGTTAAGATTGTTGACTGTTATGAAAATAATGGAAAATCGGTTTTTGTTATATTTTATAAGGTTGAACCTTCAGATGTTAGACATCAGAGAAATAGTTATGAAATTGCTATGGTTGAACATGAGAACAGATTTGGAAGTGAATCGAAGAAGGTTAAAGCATGGAGATTGGCTTTGAATAGAGTTTGTGCTCTTAGTGGAATTCATTACAAAGATGATATCTATGAATCAGAGTTTATTGATAAGATTGTCAGAGACATCTCAGCTAAACTACCTCCCATGCCTTTACAAATCAAACACTTAGTTGGACTTGATTCTCGTTTCGAACAAGTGAAGTCTCTCATTGATTTCGATTCTGATGATTCTGTTTGCATGTTGGGAATTTGTGGAGGTGGTGGAATAGGCAAAACCACATTTGCCATGGATATATATAACAAGATCAGACATCGATTTGAAGCTGGAAGTTTTCTTGCTAATGTAAGAGAAAAATCAAATGCAAGCACTAGTGGCCTGGGAGATCTCCAAAGGACACTTCTGTCTGAAATGGGTGTGGAGACACAAACCATGATGGGAAGCACATTTAGAGGATGCTCGGAAATAAAACGCAGACTATCCCACAAAAGAGTTCTTCTGGTACTAGATGATGTTGATTCAGTAAAACAATTGGAAACATTAGCTGGAGGACATGATTGGTTTGGTTCTGGTAGCAGAATCATCATAACAACAAGAGATGCAGATGTTCTACATAAGCATGATGTGAAAACATATAAACTCGAAGAGTTAAATTATCATGAATCCATTGAACTCTTTTGTAGGTATGCCTTTAATATGAGCAAACCTGCAGAAAACTTTGGAAATATCTCTTCTCGTGCAATAAATTATGCAAAGGGTATACCATTGGCTTTAAAAGTAATAGGATCAAATTTGAAAGGTAAGAGCATAGAGGAGTGGGTTATTGAACTGCAGAAATATAAAAAGGTTCCAGATGTTGAGATTCAAGGTGTACTGGAAATAAGCTACAAAAGCCTATCTGACTTGGACCAAAAAGTTTTTCTTGACATGGCTTGCTTTTTCAAAGGGGAAAGATGGGATTATGTTAAAAGGGTACTAGATGCTTGTGATTTCTACCCAATTATACGAGTATTTGTTAGCAAATGTCTCATAACTGTTGATGAAAATGGTTGTTTAGAAATGCATGATCTAATACAAGACATGGGTAGAGAGATTGTTCGAAAGGAATCAGCATCAAACCCTGGTGAACGCAGCCGATTATGGTCTCATAAAGATGTTCTTGATGTACTAAAAGGAAACATGGGAAGTTCTACAGTTGAAGGAATAAAGCTTCATCCCCCAAAACAAGAAAAAGTAGATCAGTGGGCTCATACTGCCTTTGAGAAGATGAAAAACCTCAGAATTTTGATTGTTAGGAATACATTATTTTTATCAGGACCTACTTATCTTCCAAATAGTTTGCGTCTACTCGATTGGAAGTGCTTCCCATCAAAGAATTTCCCACCAGATTTTTATCCATATAGAATTGTTGACTTCAAGTTACCTCATTGCTCTATGATATTGAAAAAGCCCTTCCAGATTTTTGAGGATTTAACATTCATCAATCTCTCGCATAGTCAATCCATAACTCAAATTCCTGATCTGTCTGGAGCTAAAAACTTAAGAATGTTTACACTTGATAAATGTCGTAAACTGGTAAGGTTTGATATATCAATTGGGTTTTTGCCTAATCTGGTGTATTTAAGTGCTTCTGGGTGCACTGAGCTCAAATGTTTTGTGCCAAAAATGTATTTGCCATCCCTTCAAGAGCTTTCATTTAACTTCTGCGAAAAGTTGGAATACTTCCCACATGTAATACAAAAGATGGATAAGCCGTTAAAGATTTACATGATAAATACTGCCGTTAAGGAGTTTCCAAAGTCTATTGGTAACCTTACGGGGCTTCAATATATAGACATGTCACAATGTAAAGGGGTCAAAGATCTATCGAGTAGCTTCTTACTGCTTCCAAAACTGCTCACTTTGAAAATTGATGGATGCTCGCAACTTGGGGCATCATTTCAAAGGTTCAAAGATCACCATTCAAGGGCAAATGGTTATCCAAATTTAGAAACACTTCATTTTAGCATGGCTAATCTATCATATGAAGATGTTGATGCCATTATTGAATGTTTTCCAAAACTCACGGACTTGAAAGTATCACACAGTGACTTTATAGCCCTTCCAAAATGCATCAGAGGTTCTTTGCACTTGAAAAGTCTTGATGTGAGCTTCTGCAATAATCTCACAGAAATTCCAGAACTTCCATTAAGTATTCAGAAAATAGATGCAAGACATTGTCCATCCTTAAGATCAGAGGCATCAAGTTTGCTCTGGTCAAAGGTTTCACAAGAAATCGAAAGAATACAAGTTGTGATGCCGATGTTGAAAAGGGAGATTCCAGAATGGTTTGACTGTATTTACTCTCAAGGGATTCCTATATTTTGGGCTCGCAGGAAGTTTCCCATTGTTGCTTTAGCATTAGTTTTCCAGGAAGTAAAAAAAAAGACAGACAATGTTCCTACATTTAGTGATAAAATAAGATTGTTGATTGGAATCAAGAGATGGTACACTATTAGCCTCCATTTGTTTATTGATGGCCAAGAAATTTGTTGCAGGGATTTCCATTATTTCGATATTGGGGCAGATCATGTGCTATTGTGTGATCTTCGAGTTTTGTTTAGTGATGAAGAGTGGCAGAACCTTGATGCAAGTCTCGGAGATGACTGTAAGACAATTCAGATTCAATGTGTTCCAAACTTGAAGCAAGACTTGATTCTGACTAGTTGGGGAGTTTATGTGTACAAGCAAGAAACAAGCATGAATAATATACGATTCATACCTCCCAATCTGATCGAGCCGTTGTCCAATATGCTAACACCATTTTTGGTTCCACAAAGATCTCGTGAGCAGACAGAGCAGTACATGAAACATGTTCTGAACAGTCTCAAATTTACAGATTTGTTTAATGTGGATTCCATTTGGCGACAGTCAGAAGTTTCAGACATTTCTTTAAAAGTGCTTCTCCGGTCTTTCAGAAATGCCAAGGCTGAAATTATAGATGAGGCTTCCTCCTCTCTGTGTGGGGCAAGTCTAAAACAGGATCATGAAGATTCTGTAGCAGACGTGGTTCAGGTATTAGAGATGCTGAAAGAAAAAGCCCCAAAACATTTTGCTGAACATGAATATTATCAAATTGAAGAAGGATCTGTGGAAAGCTTATTGACGGCACATGTAGAATTGGAAAACACCTTGAACATCAGAATGCCTATTGTTTTGGTGTATACTAGTAATATACTGGGAACGTACCAACGCTATTGGGGAAACATGGAGATAAAATTGGGAGATCCAGTTTTCAAATCAGTGTTGAGTAGGTTTAACGATTTTCCGTTTCGAGTTGGGACAACCACTGAAACCTCAGCCACTATCCTTGAATTGAAATGCCAGCCTCAATTTGAGGAGGAAGCTTCGAGCTCTAGCATTGAAGAATCCTTAGAGGAAGGATACCATGATCCTGAATTTGAAGAGTTAATGAGGAGGATAGAGCAGGATGCTATGAGCTTGAATAAACATTATGGCAAGATAAAGGCATCTATTGTTCAAATTGATGGGCCATTTTCTGAAATTTATGAAACAGAAGCTTTCCTCTTCCAAACACTTATGAGAAATCGTTTTACGAGATTGTATATGTTTGGATCACCATTCAAGATTAAGATCACATCTTATGGGATGATTAGGTCAGAGGACGAATATATACCCATGGTCAGGACATGTTTCTGGTTATTGTACATGGTTCTTCTTGTTCTAATCTTGCTGTCATTTTGGTTTACTCGTATGACATTAGTGTGGGGTTGGTTGCTTGTCAAGAAATTTTTTGTTGTTTCCTGTAAAAAAGTATACAGGATAGTTGACAAAAGTATTATGAGAGTAAAGAAGAAGGAATTGTAG	4245	0.3753	MANHNEFAHDVFLSFRGGTRYSFTDHLFRSLLRHGINVFRDDQNLKIGDEIGPSLLQAIEASRISIVVLCKDYASSSWCLDELVKIVDCYENNGKSVFVIFYKVEPSDVRHQRNSYEIAMVEHENRFGSESKKVKAWRLALNRVCALSGIHYKDDIYESEFIDKIVRDISAKLPPMPLQIKHLVGLDSRFEQVKSLIDFDSDDSVCMLGICGGGGIGKTTFAMDIYNKIRHRFEAGSFLANVREKSNASTSGLGDLQRTLLSEMGVETQTMMGSTFRGCSEIKRRLSHKRVLLVLDDVDSVKQLETLAGGHDWFGSGSRIIITTRDADVLHKHDVKTYKLEELNYHESIELFCRYAFNMSKPAENFGNISSRAINYAKGIPLALKVIGSNLKGKSIEEWVIELQKYKKVPDVEIQGVLEISYKSLSDLDQKVFLDMACFFKGERWDYVKRVLDACDFYPIIRVFVSKCLITVDENGCLEMHDLIQDMGREIVRKESASNPGERSRLWSHKDVLDVLKGNMGSSTVEGIKLHPPKQEKVDQWAHTAFEKMKNLRILIVRNTLFLSGPTYLPNSLRLLDWKCFPSKNFPPDFYPYRIVDFKLPHCSMILKKPFQIFEDLTFINLSHSQSITQIPDLSGAKNLRMFTLDKCRKLVRFDISIGFLPNLVYLSASGCTELKCFVPKMYLPSLQELSFNFCEKLEYFPHVIQKMDKPLKIYMINTAVKEFPKSIGNLTGLQYIDMSQCKGVKDLSSSFLLLPKLLTLKIDGCSQLGASFQRFKDHHSRANGYPNLETLHFSMANLSYEDVDAIIECFPKLTDLKVSHSDFIALPKCIRGSLHLKSLDVSFCNNLTEIPELPLSIQKIDARHCPSLRSEASSLLWSKVSQEIERIQVVMPMLKREIPEWFDCIYSQGIPIFWARRKFPIVALALVFQEVKKKTDNVPTFSDKIRLLIGIKRWYTISLHLFIDGQEICCRDFHYFDIGADHVLLCDLRVLFSDEEWQNLDASLGDDCKTIQIQCVPNLKQDLILTSWGVYVYKQETSMNNIRFIPPNLIEPLSNMLTPFLVPQRSREQTEQYMKHVLNSLKFTDLFNVDSIWRQSEVSDISLKVLLRSFRNAKAEIIDEASSSLCGASLKQDHEDSVADVVQVLEMLKEKAPKHFAEHEYYQIEEGSVESLLTAHVELENTLNIRMPIVLVYTSNILGTYQRYWGNMEIKLGDPVFKSVLSRFNDFPFRVGTTTETSATILELKCQPQFEEEASSSSIEESLEEGYHDPEFEELMRRIEQDAMSLNKHYGKIKASIVQIDGPFSEIYETEAFLFQTLMRNRFTRLYMFGSPFKIKITSYGMIRSEDEYIPMVRTCFWLLYMVLLVLILLSFWFTRMTLVWGWLLVKKFFVVSCKKVYRIVDKSIMRVKKKEL*	1415

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr4g0934	1414	Gene3D	-	7	172	IPR035897	-
	Tpr4g0934	1414	Gene3D	Ribonuclease Inhibitor	705	889	IPR032675	-
	Tpr4g0934	1414	SUPERFAMILY	L domain-like	546	875	-	-
	Tpr4g0934	1414	SMART	till_3	8	147	IPR000157	GO:0007165
	Tpr4g0934	1414	ProSiteProfiles	TIR domain profile.	7	173	IPR000157	GO:0007165
	Tpr4g0934	1414	PRINTS	Disease resistance protein signature	207	222	-	-
	Tpr4g0934	1414	PRINTS	Disease resistance protein signature	285	299	-	-
	Tpr4g0934	1414	PRINTS	Disease resistance protein signature	377	391	-	-
	Tpr4g0934	1414	PRINTS	Disease resistance protein signature	729	745	-	-
	Tpr4g0934	1414	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	14	1095	-	-
	Tpr4g0934	1414	Pfam	TIR domain	8	181	IPR000157	GO:0007165
	Tpr4g0934	1414	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	176	435	IPR027417	-
	Tpr4g0934	1414	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	14	1095	IPR044974	GO:0006952
	Tpr4g0934	1414	Pfam	NB-ARC domain	197	401	IPR002182	GO:0043531
	Tpr4g0934	1414	Gene3D	-	173	341	IPR027417	-
	Tpr4g0934	1414	Gene3D	-	342	426	IPR042197	-
	Tpr4g0934	1414	Gene3D	Ribonuclease Inhibitor	533	704	IPR032675	-
	Tpr4g0934	1414	SUPERFAMILY	"Winged helix" DNA-binding domain	413	517	IPR036390	-
	Tpr4g0934	1414	SUPERFAMILY	Toll/Interleukin receptor TIR domain	4	149	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr4g0934	Tpr-Chr4	8910735	8917029	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr4g0934	23	782	WRKY Transcription Factor Family	AT4G12020	32.225	4.06e-86	309

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr4g0934	-		-	mtr:MTR_4g023040	1831.22