Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0932 ATGGCGAATCACGATCATTTCACTCACGACGTTTTTCTCAGTTTCAGAGGCGCAACTCGCTACTCCTTCACCGATCATCTCTATCATTCACTTCTCCGTCGCGGAATAAATGTTTTCAGAGACGACCAAAAACTCAAAATCGGAGATGAAATCGGTCCTTCACTTCTACAAGCAATTGAAGATTCTAGAATCTCAATTGTTATTTTGTGTAAAGACTATGCTTCTTCCAGCTGGTGTCTTGATGAACTGGTTAAGATAGTTGACTGTTATGAAAATAATGGAAAATTGGTTATTGTTATATTTTATAAGGTTGAACCTTCTGATGTTAGGCATCAGAAAAAGAGTTATAGAGAAGCTATGATGAAACATGAGAAGAGATTTGGAAAGAAATCAGAGAAGGTGAAAGCATGGAAGTTTGCTCTGAACAGAGTGTGTGCTCTTAGTGGACTACATTGCACGGACGATATCTATGAATCTGAGTTTATCGATAAAATTGTCAAAAAAATCTCAGATAAACTACCTCCCATGCCTTTACAAATCAAACACCTAGTTGGACTCGATTCTCGTTTCGAACAGGTGAAATCTTTTTTTGATATTGAAGCCGATGAAGTACGCATTTTGGGGATATATGGAGCTGGTGGAATAGGAAAAACAACATTTGCCTTGGACATATATAACAAGATCAGACGTCAATTTGAAGCTGCAAGTTTTCTTGCGAATATTAGAGAAAAATCAAATGAAAGAACTAGTGGCATGGAAGATCTCCAAAAAACACTTTTGTCTGAGATGGGTGAGGAAACACAGACTATGTTCGGAAGCACATTTAGAGGAAGCTCTGAAATAAAAGGCAGGCTTGCCCAAAAAAGAGTTCTTCTCATACTCGATGATGTTGATTCAGTAAAACAATTGAAATCATTAGCTGGAGGACATGATTGGTTTGGTTCGGGGAGTAGAATCATTGTAACCACAAGAGATAAAGATGTTCTAAAAAAGCATGATGTTAAAATTAAAACATATAAACTCGAAGAGCTAAATCATCATGAATCCATGGAACTCTTTTGTTGGCATGCCTTTAATATGAGCAGACCGGTAGATAATTTTGCAAATATATCTTCTCATGCAATAAGTTATGCAAAGGGTATTCCATTGGCTTTAAGAGTAATAGGATCCAATTTGAAAGGTAAGAGCATCGAGGAATGGGATATTGAAATTCAAAGATATAGAATGGTTCCAGATGCTGAGATTCAAGGTGTACTTGAAATAAGCTACAAATGTCTATCTGACTTGCAACAGAAAGTTTTTCTAGACATTGCTTGTTTTTTCAAAGGGGAAAGATGGGATTATGTTAAAAGGATACTAGATGCTTGTGATTTCTACCCAGATATACGAGTATTTGTTAGTAAATGTCTCATAACTATTGATGAAAATGGTTGTTTAGAAATGCATGATCTAATACAAGACATGGGTAGAGAGATTGTTCGAAAGGAATCAGCATCAAACCCTGGTGAACGTAGCAGATTATGGTCTCATAAAGATGTTCTTAACGTACTGAAAGGAAACTTGGGAAGTACTACAATTGAAGGAATAATACTTCATCCCCCAAAACGTGAGAAAGTAGATCAATGGGCTTGTAATGCCTTTGAGAAGATGAAAAACCTCAGAATTTTGATTGTTAGGAATACATTGTTTTCATCAGGACCTAGTTATTTGCCAAATAGTTTACGGCTAATTGATTGGAAGTGGTACCCATCAAAGAATTTTCCGCCAAATTTTTATCCATACAAAATTGTTGACTTCAAGTTACCTCATAGCTCGATGATATTGAAAAATCCTTTTCAGATTTTCGAGGATTTAACATTCATTAATCTCTCCCATAATAAATCGATAACTCAAATTCCTGATCTGTCTGGAGCTAAAAGCTTAAGAGTGTTTACGGTCGATAAATGCCATAAACTAGTAAAGTTTAATATCTCTGTTGGATTTATGCCTAATTTGGTGTATTTAAGTGCTTCAGGGTGCACTGAGCTCGAAAGTTTTGTGCCAAAAATGTATTTGCCCTCCCTTCAAGTGCTTTCATTTAATTTCTGCAAAAAATTTGAACACTTCCCACAAGTGATGCAAAAGATGGAAAAACCATTAAAGATTAACATGATAAGCACTGCCATTAAAGAGTTTCGAAAGTCTGTTGGTAACCTTACAGGCCTTGAGTATATAGACATGTCAATTTGTAAAGGGCTTAAAGAGATATCAAGTAGCTTCTTATTGCTTCCTAAACTGCACACTTTAAAAATTGATGGATGCACTCAACTTGGAGAATCATTTCAAAGGTTCAAAGAGCGCCATTCAGTGGCCAACGGGTATCCAAATTTAGAAACACTTCATTTTAGCGAGGCTAATCTATCATATGAAGATGTTAATGCCATTATTGAATGTTTTCCAAATCTGGAAGACTTGAAAGTTTCGCACAATGGTTTTGTAGCCCTCCCAAATTGCATTGGGAGTTCTATGCACTTGAAAAGTCTTGATGTGAGCTTTTGCATGGATCTTACAGAAATTCCAGAACTTCCATTAAGCATTCACAAAATAGATGCAAGGCACTGTCAATCCTTAACCTCGGAGGCATCAAGTTTGCTCTGGACCAAGGTTTCACAAGAGATCCAACGAGTACAAGTTGTTATGCCGACGCTGAAAAGGGAAATTCCAGAATGGTTTTACCGCAGCACTCATGAGATTCCACTTTTATGGGCTCGTCGGAAATTTCCCATTATTGCTATAGCGTTAGTGTTCGGGGAAGTAAAAAGGGCTGACGTTATTTCTGAATTTGTTGATGCTATAAAGTTGTTTAGTGGAGCCAATGACTGGAGCACTGTTAGTCTCCATTTGTTTATTGATGGCCAAGAGATTTGTAGCAAGGATTGCCATTATTTCAACGTTGGGGAAGATCATGTGCTAATTTGTGATCTACGAGTTTTGTTCAATGATGAAGAGTGGAAGAACCTTGATGCAAGTCTTGGAAATGAATGGAAGGCCGTTCAGGTTCAATATGATTCAGACTTGATTCTCACTAATTGGGGAGTTTATGTGTACAAGCAAGAAAAAAGCACGGATGATATTCAATTCATACCTCCTAATCACAATTTCTTTTCCTACATTCCATCATCTCATTTGGTTCCAAAGAGATATCCAGACATGCAAATCAAACATTTCCTCGAAAGTTTCAATCCAAGAGACATGTTTAATGAACTTATGCCTCAAATAGAATCAGAAGAAGGTTCATTCTGGTCCTTAAAAGTGCTTTTGCGGTCTTTGAGGAATGCCAAGGATGAAGTTATAGAAATGACTTCTTCCTCTGTGTATGGCGAGAGTGTAAAGCAAGACCATGAAGATTCTGTAGAGGATGTTATTCAAGTATTAGAGATGCTAAAAGAGAGTTATTCAGAACATTTTGCTGATTCATCTCCTGATGATCTTCAAATTGCATGCGGAGTTGTAGAAAGAATGCTGAGGGCACGGGTAGAGTTATTCGAAGAAAATTGCATGGACATTGGTATGCCTATTATTCTAGAGTATACTGATACATTGGGAGCTACTAACCGACGCTTTTGGGGAACCATGGAGGTAAAATTGGGAGATCCATTTTACAAACCAGTGATGAAGAGGCTAATCCAACTTTCCTTGGACCGTTCGATGGTTGACTTGAGGGAAACCTTTCTTGAATTGAAATGCCAACCTGCAGGTGAAGAGGAAGCTTCAAGCTCTCTCATAGAAGAATCCTTGGAAGGAAACTACAATCCTGAATTGGAAGAGTTAATGAGAATGATAGAGCAAAATGCTATGAGCTTTAATAAATCTTATGGGAAAATGAAGGCATCTATTATTCAAACTGATGATCCCTTTTCTGAAAATTATCAATTGGAATCATTAATCTTAGGAAGATTTATGATGTTAGGAAAATTGACAATGTTTGGATCAGTGACCAAGTTCAAGATCACACCTTACGGAAAGATGAGAACTGAGGATGGACCTTTCCGCTTTCTGAGGATATGTTTATGGGGTTTGATTTTGGTTCTTATTAGCCTAGTTATTCTGTCATTTTATTTCGTTGTAGGTGTGTGCCTTAATTTTTATAGGATACCAATAATAAGGAAGTTACTAGTGTGTGGTTGGTGGCTTGTAAACACAATATTCCTGTCTTGTAAAAAATTATACAGGGGACTTGGCAAGATTATTAACAGAGTAAAAGACAAGGAATTTTAG 4257 0.37 MANHDHFTHDVFLSFRGATRYSFTDHLYHSLLRRGINVFRDDQKLKIGDEIGPSLLQAIEDSRISIVILCKDYASSSWCLDELVKIVDCYENNGKLVIVIFYKVEPSDVRHQKKSYREAMMKHEKRFGKKSEKVKAWKFALNRVCALSGLHCTDDIYESEFIDKIVKKISDKLPPMPLQIKHLVGLDSRFEQVKSFFDIEADEVRILGIYGAGGIGKTTFALDIYNKIRRQFEAASFLANIREKSNERTSGMEDLQKTLLSEMGEETQTMFGSTFRGSSEIKGRLAQKRVLLILDDVDSVKQLKSLAGGHDWFGSGSRIIVTTRDKDVLKKHDVKIKTYKLEELNHHESMELFCWHAFNMSRPVDNFANISSHAISYAKGIPLALRVIGSNLKGKSIEEWDIEIQRYRMVPDAEIQGVLEISYKCLSDLQQKVFLDIACFFKGERWDYVKRILDACDFYPDIRVFVSKCLITIDENGCLEMHDLIQDMGREIVRKESASNPGERSRLWSHKDVLNVLKGNLGSTTIEGIILHPPKREKVDQWACNAFEKMKNLRILIVRNTLFSSGPSYLPNSLRLIDWKWYPSKNFPPNFYPYKIVDFKLPHSSMILKNPFQIFEDLTFINLSHNKSITQIPDLSGAKSLRVFTVDKCHKLVKFNISVGFMPNLVYLSASGCTELESFVPKMYLPSLQVLSFNFCKKFEHFPQVMQKMEKPLKINMISTAIKEFRKSVGNLTGLEYIDMSICKGLKEISSSFLLLPKLHTLKIDGCTQLGESFQRFKERHSVANGYPNLETLHFSEANLSYEDVNAIIECFPNLEDLKVSHNGFVALPNCIGSSMHLKSLDVSFCMDLTEIPELPLSIHKIDARHCQSLTSEASSLLWTKVSQEIQRVQVVMPTLKREIPEWFYRSTHEIPLLWARRKFPIIAIALVFGEVKRADVISEFVDAIKLFSGANDWSTVSLHLFIDGQEICSKDCHYFNVGEDHVLICDLRVLFNDEEWKNLDASLGNEWKAVQVQYDSDLILTNWGVYVYKQEKSTDDIQFIPPNHNFFSYIPSSHLVPKRYPDMQIKHFLESFNPRDMFNELMPQIESEEGSFWSLKVLLRSLRNAKDEVIEMTSSSVYGESVKQDHEDSVEDVIQVLEMLKESYSEHFADSSPDDLQIACGVVERMLRARVELFEENCMDIGMPIILEYTDTLGATNRRFWGTMEVKLGDPFYKPVMKRLIQLSLDRSMVDLRETFLELKCQPAGEEEASSSLIEESLEGNYNPELEELMRMIEQNAMSFNKSYGKMKASIIQTDDPFSENYQLESLILGRFMMLGKLTMFGSVTKFKITPYGKMRTEDGPFRFLRICLWGLILVLISLVILSFYFVVGVCLNFYRIPIIRKLLVCGWWLVNTIFLSCKKLYRGLGKIINRVKDKEF* 1419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0932 1418 Gene3D Ribonuclease Inhibitor 541 715 IPR032675 -
Tpr4g0932 1418 Gene3D Ribonuclease Inhibitor 716 892 IPR032675 -
Tpr4g0932 1418 SUPERFAMILY "Winged helix" DNA-binding domain 414 518 IPR036390 -
Tpr4g0932 1418 ProSiteProfiles TIR domain profile. 7 173 IPR000157 GO:0007165
Tpr4g0932 1418 Gene3D - 7 172 IPR035897 -
Tpr4g0932 1418 ProSiteProfiles Leucine-rich repeat profile. 617 639 IPR001611 GO:0005515
Tpr4g0932 1418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 437 IPR027417 -
Tpr4g0932 1418 Gene3D - 343 427 IPR042197 -
Tpr4g0932 1418 SUPERFAMILY L domain-like 534 876 - -
Tpr4g0932 1418 Pfam NB-ARC domain 191 401 IPR002182 GO:0043531
Tpr4g0932 1418 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 1124 - -
Tpr4g0932 1418 SMART till_3 8 147 IPR000157 GO:0007165
Tpr4g0932 1418 PRINTS Disease resistance protein signature 206 221 - -
Tpr4g0932 1418 PRINTS Disease resistance protein signature 284 298 - -
Tpr4g0932 1418 PRINTS Disease resistance protein signature 378 392 - -
Tpr4g0932 1418 PRINTS Disease resistance protein signature 730 746 - -
Tpr4g0932 1418 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 1124 IPR044974 GO:0006952
Tpr4g0932 1418 Gene3D - 173 340 IPR027417 -
Tpr4g0932 1418 Pfam TIR domain 9 181 IPR000157 GO:0007165
Tpr4g0932 1418 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 149 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0932 Tpr-Chr4 8901807 8907308 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0932 9 779 WRKY Transcription Factor Family AT4G12020 31.195 4.51e-90 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0932 - - mtr:MTR_4g023040 2041.54