Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0931 ATGTCACTCCAAGTTGGATCCATTCGCGCTATCTCAGAGGAATTTGGAAGGGAATCGGAGAAGGTTAAAGCATGGAGGGCAGCTTTGAATAGAGTTTGTGCTCTTAGTGGACTTCATTACAGAGATGATATCTATGAATCTGAGTTTATTGATAAGATTGTCAGAGACATCTCAGCTAAACTACCTCCCATGCCTTTACAAATCAAACACTTAGTTGGACTTGATTCTCGTTTTGAACAATTGAAGTCTCTCATTGATATCGATTCTGATGATTCTGTTTGCATGTTGGGAATTTGTGGAGGTGGTGGATTAGGCAAAACCACATTTGCCATGGATATATATAACAAGATCAGACATCGATTTGAAGCTGGAAGTTTTCTTTCTAATGTCAGAGAAAAATCAAATGGAAGCACTAGTGGCCTGGGAGATCTGCAAAGGACACTTCTGTCTGAAATGGGTGTGGAGACACAAACCATGATGGGAAGCACATTTAGAGGAAGTTCAGAAATAAAACGCAGGCTATCCCACAAAAGAGTTCTTTTGGTACTAGATGATGTTGATTCAGTAAAACAATTGGAAACATTAGCTGGAGGACATGATTGGTTTGGTTTTGGTAGCAGAATCATCATAACAACAAGAGATGCAGATGTTCTACATAAGCATGATGTGAAAACATATAAACTGGAAGAGTTAAATTATCATGAATCCATTGAACTCTTTTGTTGGTATGCCTTTAATATGAGCAAACCTGCAGAAAACTTTGGAAATATCTCGTCTCGTGCAATAAATTATGCAAAGGGTATTCCATTGGTTTTAAAAGTAATAGGATCGAATTTAAAAGGTAAGAGCATAGAGGACTGGGATATTGAACTGCAGAAATATAAAAAGGTTCCAGATGTTGAGATTCAAGGTGTACTGGAAATAAGCTACAAAAGCCTATCTGACTTGGACCAAAAAGTTTTTCTTGACATTGCTTGCTTTTTCAAAGGGGAAAGATGGGATTATGTTAAAAGGGTACTAGATGCTTGTGATTTCTACCCAATTATACGAGTATTTGTTAGTAAATGTCTCATAACTGTTGATGAAAATGGTTGTTTAGAAATGCATGATCTAATACAAGACATGGGTAGAGAGATTGTTCGGAAGGAATCTGTATCAAACCCTGGTGAACGCAGCAGATTATGGTCTCATAAAGATGTTCTTGATGTACTAAAAGGAAACATGGGAAGTTCTACAGTTGAAGGAATAAAGCTTCATCCCCCAAAACAAGAAAAAGTAGATCAGTGGGCTCATACTGCCTTCGAGAAGATGAAAAACCTCAGAATTTTGATTCTTAGGAATACATTATTTTTATCAGGTCCTAATTATCTGCCAAATAGTTTACGTCTACTCGATTGGAAGAGCTTCCCATCAAAGAATTTCCCGCCAGATTTTTATCCATATAGAATTGTTGACTTCAAGTTACCTCATTGCTCTATGATATTGAAAAAGCCCTTCCAGTTTGTTTTGCAGATTTTTGAGGATTTAACATTCATCAATCTCTCGCATAGTCAATCCATAACTCAAATTCCTGATCTGTCTGGAGCTAAAAACTTAAGAATGTTTACACTTGATAAATGTCGTAAACTGGTAAGGTTTGATATATCAATTGGGTTTTTGCCTAATCTGGTGTATTTAAGTGCTTCTGGGTGCACTGAGCTCAAATGTTTTGTGCCAAAAATGTATTTGCCATCCCTTCAAGAGCTTTCATTTAATTTCTGCGAAAAGTTGGAATACTTCCCACATGTAATACAAAAGATGGATAAGCCGTTAAAGATTTACATGATAAATACTGCCGTTAAGGAGTTTCCAAAGTCTATTGGTAACCTTACGGGGCTTCAATATATAGACATGTCACAATGTAAAGGGGTCAAAGATCTATCGAGTAGCTTCTTACTGCTTCCAAAACTGCTCACTTTGAAAATTGATGGATGCTCTCAACTTGGGGCATCATTTCAAAAGTTCAAAGATCGCCATTCAGGGGCAAATGGTTATCCAAATTTAGAAACACTTCATTTTAGCGAGGCTAATCTATCATATGAAGATGTTGATGCCATTATTGAATGTTTTCCAAAACTCACAGACTTGAAAGTATCACACAGTGAGTTTATAGCCCTTCCAAAATGCATCAGAGGTTCTTTGCACTTGAAAAGTCTTGATGTGAGCTTTTGCAATAATCTCACAGAAATTCCAGAACTTCCATTAAGTATTCAGAAAATAGATGCAGGACATTGTCAATCCTTAACATCAGAGGCATCAAGTTTGCTGTGGTCTAAGGTTCCCCAAGAGATCCAAAGAATACAAGTTGTGATGCCGATGCTGAAAAGGGAGATTCCAGAATGGTTTGACTGTATTTACTCTCAAGGGATTCCGATTTTTCGGGCTCGCAGGAAGTTTCCCATTGTTGCTTTAGCATTAGTTTTCCAGGAAGTAAAAAAAACAACAGACAATCTTCCTTCATTTATGGATAATATAAGATTGTTGTCTGGAATTAAGAAATTTTACATTATTAGCCTCCATTTGTTTATTGATGGCCAAGAAATTTGTGGCAGGGATTTCCATTTTTTCAATGTTGGGGAAGATCATGTGATATTGTGTGATCTACGAGTTTTGTTTAGTGATGAAGAGTGTCAGAACCTTAATGCAAGTCTTGGAGATGACTGGAAGACAATTCAGGTTCAAATTCAATGTGTTCCTAACTTGAAGCAAGACTTGATTCTGACTAATTGGGGAGTTTATGTGTACAAGCAAGAAACAAGCATGAATAATATACAATTCATACCTCCCAATCTGATCAACTCTTTTTCCTATATGCTATTATCATGGTTGGATCTACATAGATCTTATGAGCAGTACAAGAAACATATTTTGAACAGTTTCAAATTTACTGACATATTGAATACGGATTCCATTTGGCGACAATCAGATGTTGCAGACATTTTTTCCAAAGTGATTTTCCGCTGGTTGAGAAATACCAAGGCTGAAATTGCAGACGAGGCTTCCTCCTCACTGTGTGGGGCAAGTTTAAAGCAAGGCCATGAAGATTCTGTAGCAGATGTGGTTCAGGTATTAGAGATGCTAAAAGAGAATGTACCAAAACATATTGCTGAACATGAATGTTATCAATTGGAAGACAGATTTGTGGAAAGCTTATTGACGGCATATGTAGAATTGGAAAACACCTTGAACATAAGAATGCCTATTGTTCTAGTGTACATTGATATACAGGGAACGAACCAACGCTATTGGGGAAACATGGAGATAAAATTGGGAGATCCAGTTTTCAAATCAGTGTTGAGTAGGTTTAACGATTTTCCATTTCGAGTTGGGACAACCACTGAAACCTCAGCCACTATCCTTGAGTTGAAATGCCAGCCTGACTTTGAGGAGGAAGCTTCGAGCTCTAGCATTGAAGAATCCTTTGAGGAAGATGCTGTATATGAGGAGTTAATGAGGAGGATAGGGCAAGATGCTATGAGCTTGAATAAACATTATGGCAAGATAAAGGCATCTATTGTTCAAATTGATGGGCCATTTTCTGAAATGTATGAAACAGAAGCTTCCCTCTTCCAAATGCTTATGAGAAATCGTTTTACGAGATTGTATATGTTTGGATCACCATACAAGATTACGATCACATCTTATGGGATGATTAGGTCAGAGGACGAATATATACCCATTGTCAGGACATGTTTCTGGTTATTGTACGCGGTTCTTCTTGTTCTAATCTTGCTGTCATTTTGTTTTACTCATATGATATTAGTGTGGGGTTGGTTGCTTGTCAAGAAATTTTTTGTTGTGTCTTGTAAAAAAGTATACAGGATAATTGACAAGAGTATTATGAGAGTAAAGAAGAAGGAATTGTAG 3906 0.371 MSLQVGSIRAISEEFGRESEKVKAWRAALNRVCALSGLHYRDDIYESEFIDKIVRDISAKLPPMPLQIKHLVGLDSRFEQLKSLIDIDSDDSVCMLGICGGGGLGKTTFAMDIYNKIRHRFEAGSFLSNVREKSNGSTSGLGDLQRTLLSEMGVETQTMMGSTFRGSSEIKRRLSHKRVLLVLDDVDSVKQLETLAGGHDWFGFGSRIIITTRDADVLHKHDVKTYKLEELNYHESIELFCWYAFNMSKPAENFGNISSRAINYAKGIPLVLKVIGSNLKGKSIEDWDIELQKYKKVPDVEIQGVLEISYKSLSDLDQKVFLDIACFFKGERWDYVKRVLDACDFYPIIRVFVSKCLITVDENGCLEMHDLIQDMGREIVRKESVSNPGERSRLWSHKDVLDVLKGNMGSSTVEGIKLHPPKQEKVDQWAHTAFEKMKNLRILILRNTLFLSGPNYLPNSLRLLDWKSFPSKNFPPDFYPYRIVDFKLPHCSMILKKPFQFVLQIFEDLTFINLSHSQSITQIPDLSGAKNLRMFTLDKCRKLVRFDISIGFLPNLVYLSASGCTELKCFVPKMYLPSLQELSFNFCEKLEYFPHVIQKMDKPLKIYMINTAVKEFPKSIGNLTGLQYIDMSQCKGVKDLSSSFLLLPKLLTLKIDGCSQLGASFQKFKDRHSGANGYPNLETLHFSEANLSYEDVDAIIECFPKLTDLKVSHSEFIALPKCIRGSLHLKSLDVSFCNNLTEIPELPLSIQKIDAGHCQSLTSEASSLLWSKVPQEIQRIQVVMPMLKREIPEWFDCIYSQGIPIFRARRKFPIVALALVFQEVKKTTDNLPSFMDNIRLLSGIKKFYIISLHLFIDGQEICGRDFHFFNVGEDHVILCDLRVLFSDEECQNLNASLGDDWKTIQVQIQCVPNLKQDLILTNWGVYVYKQETSMNNIQFIPPNLINSFSYMLLSWLDLHRSYEQYKKHILNSFKFTDILNTDSIWRQSDVADIFSKVIFRWLRNTKAEIADEASSSLCGASLKQGHEDSVADVVQVLEMLKENVPKHIAEHECYQLEDRFVESLLTAYVELENTLNIRMPIVLVYIDIQGTNQRYWGNMEIKLGDPVFKSVLSRFNDFPFRVGTTTETSATILELKCQPDFEEEASSSSIEESFEEDAVYEELMRRIGQDAMSLNKHYGKIKASIVQIDGPFSEMYETEASLFQMLMRNRFTRLYMFGSPYKITITSYGMIRSEDEYIPIVRTCFWLLYAVLLVLILLSFCFTHMILVWGWLLVKKFFVVSCKKVYRIIDKSIMRVKKKEL* 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0931 1301 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 36 1013 - -
Tpr4g0931 1301 SUPERFAMILY "Winged helix" DNA-binding domain 301 405 IPR036390 -
Tpr4g0931 1301 Pfam NB-ARC domain 88 288 IPR002182 GO:0043531
Tpr4g0931 1301 Gene3D Ribonuclease Inhibitor 602 783 IPR032675 -
Tpr4g0931 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 324 IPR027417 -
Tpr4g0931 1301 Gene3D - 230 314 IPR042197 -
Tpr4g0931 1301 PRINTS Disease resistance protein signature 95 110 - -
Tpr4g0931 1301 PRINTS Disease resistance protein signature 173 187 - -
Tpr4g0931 1301 PRINTS Disease resistance protein signature 265 279 - -
Tpr4g0931 1301 PRINTS Disease resistance protein signature 621 637 - -
Tpr4g0931 1301 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 36 1013 IPR044974 GO:0006952
Tpr4g0931 1301 Gene3D - 2 60 IPR035897 -
Tpr4g0931 1301 SUPERFAMILY L domain-like 434 767 - -
Tpr4g0931 1301 Gene3D Ribonuclease Inhibitor 404 601 IPR032675 -
Tpr4g0931 1301 Gene3D - 61 229 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0931 Tpr-Chr4 8894537 8901291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0931 20 670 WRKY Transcription Factor Family AT4G12020 33.632 8.67e-80 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0931 - - mtr:MTR_4g023040 1608.96