LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr4g0930	ATGGCGAATCACAATGATTTCACTCACGACGTTTTTCTCAGTTTCAGAGGCGGAACACGCTACTCCTTCACCGATCATCTCTATCATTCACTTCTCCGTCGTGGAATCAATGTTTTCAGAGACGATCGAAAACTCAAAATCGGCGAAGAAATCGGTCCTTCTCTTCTACAAGCAATCGAAGCTTCTAGAATCTCAATTGTTGTTCTCTGTAAAGACTATGCTTCTTCCAGTTGGTGTCTTGACGAACTTGTTAAAATCGTTGACTGTTATGAAAATAATGGAAAATCGGTTTTTGTTATATTTTATAAGGTGGAACCTTCTGATGTTAGGCATCAGAGAAATAGTTATGAAATTGCTATGATTGAACATCAGAACAGATTTGGAAGTGAATCTGAGAAGGTTAAAGCATGGAGGGCAGCTTTGAACAGAGTTTGTGCTCTCAGTGGATTACATTACAAAGACGATATCTATGAATCTGAGTTTATTGATAAGATTGTCAGAGACATCTCAGCTAAACTACCTCCCATGCCTTTACAAATCAAACACCTAGTTGGACTCGATTCTCGTTTCGAACAAGTGAAGTCTCTTATTGATATTGATTCTAATGATTCTGTTTGCATGTTGGGAATTTTTGGAGGTGGTGGAATAGGCAAAACAACATTTGCCATGGATATATATAACAAGATCAGACATCAATTTGAAGCTGCAAGTTTTCTTGCAAATGTTAGAGAAAAATCAAAGGAAAGAACGAGGGGCCTGGAAGATCTCCAAAAAACTCTTCTATATGAGATGGGTGAGGAAACCCAGACTATGTTCGGAAGCACATTTAGAGGAAGCTCTGAAATAAAACATAGGCTTGCCCAAAGAAAAGTTCTTCTCATACTCGATGATGTTGATTCGGTAAAACAATTGGAATCACTAGCTGGAGGACATGATTGGTTTGGTCCAGGTAGTAGAATCATTGTAACAACAAGAGATAAAGATGTTCTACAGAAGCATGATGATAAAATTAAAACATATAAACTCGAAGAGCTAAATCATCAAGAATCCATTGAACTCTTTTGTTGGTACGCTTTTAATATGAGCAGACCTAAAGAAAACTTTGCAAAAATCTCTTCCCATGCAATCAGTCATGCAAAGGGTATTCCATTGGTTTTAAGAGTAATAGGATCCAATTTGAAAGGTAAGACCCTAGAGGAATGGGAAATTGAACTGCAGAAATACAAAAAGGTTCCAGATGCTGAGATTCAAGGTGTACTAGAAATAAGCTACAAATGTCTATCTGACTTGGACCGGAAAATTTTTCTAGACATTGCTTGTTTTTTCAAAGGGGAAAGATGGGATTATGTTAAAAGAATACTAGATGCTTGTGATTTCTTCCCAGTTATTCGAGTATTTGTTAGTAAATGTCTCATAACTGTTGATGAAAATGGCTGTTTAGAAATGCATGATTTAATACAAGACATGGGTAGAGAGATTGTTCGCAAGGAATCGACATCAAACCCTGGTGAACGCAGCAGATTATGCTCTCATAAAGATGTTCTTAATGTATTGAAAGGAAACTTGGGAAGTACTAAAGTTGAAGGAATAATGCTTGATCCCCCAAAACAGGAGAAAGTAGATCATTGGGCATATAATGCCTTTCAGAAGATGAAAAACCTCAGAATTTTGATTGTTAGGAATACATTGTTTTCATCAGGGCCTAGTTATTTGCCGAATAGTTTACGGCTACTAGATTGGAAGTTCTTCCCATCGAAGAATTTCCCGGCTAATTTTTATCCACATAAAATTGTTGACTTCAAGTTACCTCATAGCTCTATCATATTGAAAAATCCCTTTCAGAATTTTGAGGATTTAACATTCATCAACCTCTCCCATAGTCAATCCATAACTCAGATTCCTGATCTATCTGGAGCTAATAACTTAAGAGTGTTTACACTTGATAGATGTCGTAAACTGGTAAGGTTTGATATATCCATTGGATTTATGCCTAATCTGGTGTATTTAAGTGCTTCAGGGTGCACTGAGCTCCAAAGTTTTGTGCCAAAAATGTATTTGCCCTCCCTTCAAGTGCTTTCATTTAATCACTGCGAAAGGTTTGAACACTTCCCACATGTAATGAAAAAGATGGATAAGCCTTTAAAGATTTACATGATAAACACCGCCATTAAGGAATTTCCAAAGTCTATTGGAAATCTTACAGGCCTTGATTATATAGACATGTCGATTTGTAAAGGGCTTAAAGATTTATCAAGTAGCTTCTTATTGCTTCCAAAACTGGTAACTTTGAAAATTGATGGTTGCTCTCGACTTGGAGAATCATTTCAACGGTTCAAAGAGAGCCATTCAGTGGCAAACAACTATCCAAATTTAGAAGCACTTCATTTTAGCGAGGCTAATCTATCAAATGAAGATGTTAATGCCATTATTGAAACATTTCCAAAACTGAAAGACTTCAAAGTATCGCACAATGGGTTTGTAGTCCTCCCAAATTGCATTAGAAGATCTATGCACTTAAAAAGTCTTGATGTGAGCTTTTGCACGAATCTTATAGAAGTTCCAGAACTTCCATTAAGTATTCAGAAGATAGATGCAAGACACTGTCAATCCTTATCTTTAGAGGCATCAAGTGTGCTCTGGTCCAAGGTTTCACGAGAGGTCCAAAGAATACAAGTAATCATGCCAATGCCGAAAAGGGATATTCCAGAATGGTTTGACTGCGTCTGCACTCAAGAGGTTCCGCTTTTATGGGCTCGCCGGAAGTTTCCCGTTGTTGCTTTAGCATTAGTGTTCGAGGAAGTAAAAAATACAGATGATGTTTCTAAATTTGTTGATGCTATAAAATTATTGAATGGAGTCAAGGGCTGGCACACTGTTAGCCTCCATTTGTTTATTGATGGTCAAGAAATTTGTAGCAAGAATTGCCATTATTTTAATGTTGGGGGAAATCATGTGCTATTGTGCGATCTACGTGTTTTGTTCAGCGATGAAGAGTGGCAGGACATCGATGCAAGTCTTGGAGATGACTGGAAGGCCATTCAGGTTCAGTATAATTCAGACTTGATTCTGAATAAGTGGGGAGTTCATGTGTACAAGCAAGAGACAAGCATGGATGATATCCAATTCATACCTCCCAAATGCAACTCCTTTTCCTACATGTCATCGTCATGTTTGGTTCCAAAGGGATCTCCAGAGCAAAAAATGAAACATATCCTTGAAAGTTTCAATCCAAGAGATATGTTTAATGAGTGGTTGCCTTTACTAGAATCAGAAGAAGTTGAAGTCAGGTCTTTAAAAGTGCTATTGAGGTCTTTTAGGAATGCCAAGGCTGAAATTATAGGGGAGACTTCCTCCTCTACATATGGGGCAAGTCTGAAGCAAGACAATGAAGATTCTGTAGAGGATGTGGTTCAGGTATTAGATATTATAAAAGAGAATCTTTCAGAACATTTTGCTGAATCATCTCCCGAAGATCTTCAAATTGCAATCGGAGTCGTGGAAAGGATATTGAGGGCACGGGTAGAATTAATAAAGGAAAATAGCATGACCACTGGTATGCCTATTATTCTTGAGTATACTGATACATCGGGCGCTACAAATAGACGCTTTTGGGGAACTGTGGAGATAAAATTGGGAGATCCATTTTATAAACCGTTGTTGAAGTGGCAAAGCCAACTTTCTTGGGGACTTGGGACGTCGGACCTGAGGATAATCATTGTTGAATTGAAATGCCAGCCTGCAGATGAAGAGGAAATTTCAAGTTCTCGCCTTGAAGAATCCTTGGAGGAAGGAAACTACAATCCTGAATTGGAAGAGTTGATGAAGATGATAGAGCAAGATGCTATGAGATTCAATAAATCTTATGGGAAAATGAAGGCATCTATTGTTCAAGCTGATGAGTCATTTTCGGATAATTATCTTTGGGAAGCATTACTCCTCAAAAGACTATTTAGTTTAGGAAAATTGACAATGTTTGGATCAGTAATCAAGTTCATGATCACACCTTATGGCAAGATGAGGGTCGAAGACGACCCTTTCCGCATTCTGAGGACATGTTTCTGGGGTTTAAGTCTTGTTCTTGTTGTCTTAATTAAATGGTCATTTTATTTCTTTGTATGTGTGTTCCTTGTTCTTCTTCTCTTAATTATATGGTCATTTGATCGCTTTGTACGTGTGTGCCTTTATTTTTATAGGTTACCAATAATAAGGAAGTTATTAGTGTGGGGTTGGGGGCTTCCAAAGCAAATTTTTTTGTCTTGTAAAAAATTATACAGGGGAATTGACAAGATTATTAAGAGAATAAAAGTGAAGGAATTGTAG	4320	0.3752	MANHNDFTHDVFLSFRGGTRYSFTDHLYHSLLRRGINVFRDDRKLKIGEEIGPSLLQAIEASRISIVVLCKDYASSSWCLDELVKIVDCYENNGKSVFVIFYKVEPSDVRHQRNSYEIAMIEHQNRFGSESEKVKAWRAALNRVCALSGLHYKDDIYESEFIDKIVRDISAKLPPMPLQIKHLVGLDSRFEQVKSLIDIDSNDSVCMLGIFGGGGIGKTTFAMDIYNKIRHQFEAASFLANVREKSKERTRGLEDLQKTLLYEMGEETQTMFGSTFRGSSEIKHRLAQRKVLLILDDVDSVKQLESLAGGHDWFGPGSRIIVTTRDKDVLQKHDDKIKTYKLEELNHQESIELFCWYAFNMSRPKENFAKISSHAISHAKGIPLVLRVIGSNLKGKTLEEWEIELQKYKKVPDAEIQGVLEISYKCLSDLDRKIFLDIACFFKGERWDYVKRILDACDFFPVIRVFVSKCLITVDENGCLEMHDLIQDMGREIVRKESTSNPGERSRLCSHKDVLNVLKGNLGSTKVEGIMLDPPKQEKVDHWAYNAFQKMKNLRILIVRNTLFSSGPSYLPNSLRLLDWKFFPSKNFPANFYPHKIVDFKLPHSSIILKNPFQNFEDLTFINLSHSQSITQIPDLSGANNLRVFTLDRCRKLVRFDISIGFMPNLVYLSASGCTELQSFVPKMYLPSLQVLSFNHCERFEHFPHVMKKMDKPLKIYMINTAIKEFPKSIGNLTGLDYIDMSICKGLKDLSSSFLLLPKLVTLKIDGCSRLGESFQRFKESHSVANNYPNLEALHFSEANLSNEDVNAIIETFPKLKDFKVSHNGFVVLPNCIRRSMHLKSLDVSFCTNLIEVPELPLSIQKIDARHCQSLSLEASSVLWSKVSREVQRIQVIMPMPKRDIPEWFDCVCTQEVPLLWARRKFPVVALALVFEEVKNTDDVSKFVDAIKLLNGVKGWHTVSLHLFIDGQEICSKNCHYFNVGGNHVLLCDLRVLFSDEEWQDIDASLGDDWKAIQVQYNSDLILNKWGVHVYKQETSMDDIQFIPPKCNSFSYMSSSCLVPKGSPEQKMKHILESFNPRDMFNEWLPLLESEEVEVRSLKVLLRSFRNAKAEIIGETSSSTYGASLKQDNEDSVEDVVQVLDIIKENLSEHFAESSPEDLQIAIGVVERILRARVELIKENSMTTGMPIILEYTDTSGATNRRFWGTVEIKLGDPFYKPLLKWQSQLSWGLGTSDLRIIIVELKCQPADEEEISSSRLEESLEEGNYNPELEELMKMIEQDAMRFNKSYGKMKASIVQADESFSDNYLWEALLLKRLFSLGKLTMFGSVIKFMITPYGKMRVEDDPFRILRTCFWGLSLVLVVLIKWSFYFFVCVFLVLLLLIIWSFDRFVRVCLYFYRLPIIRKLLVWGWGLPKQIFLSCKKLYRGIDKIIKRIKVKEL*	1440

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr4g0930	1439	SUPERFAMILY	Toll/Interleukin receptor TIR domain	4	149	IPR035897	-
	Tpr4g0930	1439	ProSiteProfiles	TIR domain profile.	7	173	IPR000157	GO:0007165
	Tpr4g0930	1439	SUPERFAMILY	"Winged helix" DNA-binding domain	415	519	IPR036390	-
	Tpr4g0930	1439	Gene3D	-	7	172	IPR035897	-
	Tpr4g0930	1439	PRINTS	Disease resistance protein signature	207	222	-	-
	Tpr4g0930	1439	PRINTS	Disease resistance protein signature	285	299	-	-
	Tpr4g0930	1439	PRINTS	Disease resistance protein signature	379	393	-	-
	Tpr4g0930	1439	PRINTS	Disease resistance protein signature	731	747	-	-
	Tpr4g0930	1439	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	14	1122	IPR044974	GO:0006952
	Tpr4g0930	1439	Pfam	NB-ARC domain	200	407	IPR002182	GO:0043531
	Tpr4g0930	1439	Gene3D	-	344	428	IPR042197	-
	Tpr4g0930	1439	SUPERFAMILY	L domain-like	542	902	-	-
	Tpr4g0930	1439	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	14	1122	-	-
	Tpr4g0930	1439	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	176	438	IPR027417	-
	Tpr4g0930	1439	Gene3D	-	173	342	IPR027417	-
	Tpr4g0930	1439	Gene3D	Ribonuclease Inhibitor	717	883	IPR032675	-
	Tpr4g0930	1439	Gene3D	Ribonuclease Inhibitor	542	716	IPR032675	-
	Tpr4g0930	1439	Pfam	TIR domain	9	181	IPR000157	GO:0007165
	Tpr4g0930	1439	SMART	till_3	8	147	IPR000157	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr4g0930	Tpr-Chr4	8887127	8894663	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr4g0930	23	781	WRKY Transcription Factor Family	AT4G12020	32.821	4.57e-91	325

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr4g0930	-		-	mtr:MTR_4g023040	2113.96