Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0924 ATGGATTTGAGTATGAATTATGGCAATATTGAAGAAAGTGAGTTGTATGATGCTCAATTCCATTTGTACAAACATATATACAACATTCAAAGTTCTATGGCAGTCAAATTTGCAGTGGAGTTAGGAATAGCAGATGCAATCCACAACCATGGAAAACCCATAACACTTGCTGAATTAGCTTCATCTTTAAAACTCCAACCTTCTAAAGTTAATATCCTATATCGACTCATGCGCTTCCTAACACACAATGGTTTCTTCGCAAAAACAACGTCGAAAGCCAAAGCAGGGGAAGAAACAGTGTATTCTCTAACACTACCATCAAAACTTCTCATCAGAGGCAAACCGATGTGCTTAGCATTCTTTGCTAGCGGTCATCCACGTTATATGAACATGTGGAACTACACCAAGAAGTGGTTGCTTGAGGACAAGGAAGAACTCAGCCTATTTGAGAGTGCAAATGGGGAGACATTCTGGGAAATGCTAAACAAAGATTCTGAATCAGATAACCTGTGTTTTTTTCAAGAGGCCATGGAAGCTGATTCTCATATGTTTAAGCTTGCACTCAAAGACTGCAAGCATGTGTTTGAAGGTTTGGAGACTTTGGTTGATGTGGGAGGTGGGACTGGAGTTGTTGCAAAACTCATTCATGAAGTATTTCCTGATATTAAATACACTGTTTTGGATCAACCACAGGTTGTTGGTAACTTAACTGGAAATGAAAATTTGAACTTTGTTGGTGGAGATATGTTCAAATTTATCCCTCATGCAGATGCTGTTTTACTTAAGGTATGA 792 0.3851 MDLSMNYGNIEESELYDAQFHLYKHIYNIQSSMAVKFAVELGIADAIHNHGKPITLAELASSLKLQPSKVNILYRLMRFLTHNGFFAKTTSKAKAGEETVYSLTLPSKLLIRGKPMCLAFFASGHPRYMNMWNYTKKWLLEDKEELSLFESANGETFWEMLNKDSESDNLCFFQEAMEADSHMFKLALKDCKHVFEGLETLVDVGGGTGVVAKLIHEVFPDIKYTVLDQPQVVGNLTGNENLNFVGGDMFKFIPHADAVLLKV* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0924 263 Pfam O-methyltransferase domain 132 262 IPR001077 GO:0008171
Tpr4g0924 263 Pfam Dimerisation domain 33 81 IPR012967 GO:0046983
Tpr4g0924 263 PANTHER O-METHYLTRANSFERASE 7 262 IPR016461 GO:0008168
Tpr4g0924 263 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 261 IPR029063 -
Tpr4g0924 263 Gene3D Vaccinia Virus protein VP39 114 263 IPR029063 -
Tpr4g0924 263 Gene3D - 5 110 IPR036388 -
Tpr4g0924 263 SUPERFAMILY "Winged helix" DNA-binding domain 12 114 IPR036390 -
Tpr4g0924 263 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 7 262 - -
Tpr4g0924 263 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 263 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0924 Tpr-Chr4 8831587 8832867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0924 29 262 Monolignol Biosynthesis Gene Families AT3G53140 33.333 4.77e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0924 K22588 - ag:AAY18581 346.665