Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0922 ATGATGTTTCTACTTGTTCTGTTGATAATTCTTCCTCTGCTTATTATTTTTTTCCACAAACATAAAACACATAATCCACCTGGTCCTAAAGGTCTTCCCATAATAGGGAATCTTCATCAACTAGATATTTGTAATCTTCATCTTCAATTTTCACAATTCTCAAAAATATATGGTCCTCTATTTTCACTTAAACTTGGTTTTAGAAAAGCTATTGTTGTTTCTTCAGCTGAAATTGCCAAACAAGTATTGAAAAACAATGATCTTATCTTTTGTAATAGACCAATATTCTACGGTCAACGAAAATTATCTTATAATGGGTCAGAAATTGGGTTTTCTCAATATGGTGAATTTTGGAGAGAAATAAGAAAAATTTGTGTTGTTCATATATTAGGTTCCAAACGTGTGTCATATTATTCTTCTATAAGAAAATTTGAGGTGAAGAAAATGATTCAAAAAATTTCAGGACATGCTACTTGTTCAAGTGTTACAAATTTGAGTGAGTTATTGACTTCACTCTCAACTACTACAATATGTAGAATTGCTTTTGGGAAAAACTATGAGAATCAAGGAAATGAGAGAAGTAGGTTTCATGGATTGTTTTATGAGTTACATGCTTTACTTAAAGAATTCTTTGTTTCTGATTATATTCCATTTATGGGTTGGATTGATAAACTTAGAGGATTGCATGGTCGTGTTGATACACTTTTCAAGGAGTTTGATAAGTTTTATCAAGAGATTATTGATGAACATTTGGATCCAAATAGACAACAAATTGCAGAAGAAGAAGATATTGTTGATGTCTTACTCCAATTGAAGAAGAACCATTCATTTCCCTTTCATTTCACTTTTGATCACATCAAAGCTGTCCTTGTGGATATGCTTATAGCCGCAACAGATACCACATCAGCCACATCGGTTTGGGCTATGACTACCTTAATAAAAAATCCAAGAGTAATGAAGAAAGTACAAGAAGAAATTAGGAACAATATGGGAGTTAAAAAAGACTTTTTAGAAGAAGATGATATTCAAAATTTTCCATATTTGAAAGCAGTAATTAAAGAGGTACTACGATTGCACCTACCAGCCCCACTTCTTGTGCCAAGAGAATCAAGAGAAAAATGTATTATAAGTGGCTACGATATTCCACCCAAGACAATAGTTTATGTGAATGCTTGGGCTATTCAAAGAGACCATAATTTTTGGAAAAACTCAGAAGAATTTTATCCCGAGAGATTTTTAGAAAGTTCTATAAATTTTACTGGACAAGATTTTGAACTAATACCCTTTGGAGCTGGTCGTAGAATTTGCCCCGGCATATCTATGGGAGTTGCGTCATTGGAACTTACGCTTGCAAATCTTCTCTATTCTTTTGATTGGACATTGCCACATGGATTAGTAAAGGAAGATATTGATACAGAAGTGCTTCCTGGGATCTCTCAGCACAAGAAGAATCCTCTTTGTCTTGTTGCTAATATCCATATATAG 1485 0.3313 MMFLLVLLIILPLLIIFFHKHKTHNPPGPKGLPIIGNLHQLDICNLHLQFSQFSKIYGPLFSLKLGFRKAIVVSSAEIAKQVLKNNDLIFCNRPIFYGQRKLSYNGSEIGFSQYGEFWREIRKICVVHILGSKRVSYYSSIRKFEVKKMIQKISGHATCSSVTNLSELLTSLSTTTICRIAFGKNYENQGNERSRFHGLFYELHALLKEFFVSDYIPFMGWIDKLRGLHGRVDTLFKEFDKFYQEIIDEHLDPNRQQIAEEEDIVDVLLQLKKNHSFPFHFTFDHIKAVLVDMLIAATDTTSATSVWAMTTLIKNPRVMKKVQEEIRNNMGVKKDFLEEDDIQNFPYLKAVIKEVLRLHLPAPLLVPRESREKCIISGYDIPPKTIVYVNAWAIQRDHNFWKNSEEFYPERFLESSINFTGQDFELIPFGAGRRICPGISMGVASLELTLANLLYSFDWTLPHGLVKEDIDTEVLPGISQHKKNPLCLVANIHI* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0922 494 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 SUPERFAMILY Cytochrome P450 26 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 Pfam Cytochrome P450 26 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 3 492 - -
Tpr4g0922 494 Gene3D Cytochrome P450 18 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 PRINTS E-class P450 group I signature 78 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0922 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Tpr4g0922 494 PANTHER CYTOCHROME P450 71B11-RELATED 3 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0922 Tpr-Chr4 8819473 8821306 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0922 1 494 Cytochrome P450 AT4G31500 46.507 3.58e-167 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0922 - - gmx:100778293 652.899