Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0921 ATGGAAATTGAATTAATTTCTAGAGAAACCATAAAACCTTCGTTACCAACTCCTTCTCACCTCAGAATATATCCACTTTCTTTCATTGACAACATTATGCGCCGTACATATGTGCCAATAATTTTCTTTTACAAACCAAATGACATTAGTGACCAAAATTTCAAAATATCACAACTTCGAAAATCCTTATCTCAACTTTTATCCAAATATTATCCTTTTGCCGGTAGATTGAAAGATAAAATTACCATCGAATGTAATGATCAAGGTGTGTCGTTTTTAGTCGCAAAAATAAAAAACAAATTATCAGAAATCCTCCAAAATCCTACCGATAATTTGTTGAACCCTTTGTTTCCCGATGAATTGCAATGGACCAATATGGATTGGAGTGAAACTCTAATTTCATTTCAAATCAATTGTTTTTCATGCGGAGGAATGGCTATAAGTACTTGTGTGAGTCACAAAGTTAGTGATGCTTCGACCATTTTGAACTTCATGCATGATTGGTCTCTCATCAACCGGAAAATTGAAGAAGAAAATGAAACGGGTTTTTTAGTATTACCTGTTTCTAATTTACTTGATGGTGGAGCTTCAATTTTTTCACAGAAAGACTTACCTATTTTCCAAGAAGTTTTGCCGTTAAAGAGAGAAAGCAATGTTGTGTGCAAAAGGTTTGTATTTCAACCCTCAATGATTAATTTTCTCAAAGCCATGGTAACTTCTAGCCCTAGGAGTATAGAAGTTGTAACCGCATGGATTTACAAGTGTGTGGTTTCAATAATAGGGTTAAATATTGAGACAACACCGTTTAACACGGTTGTTGACCTTCGTAAAAAAATGGTTCCTCCATTGTCTGAAAAGTGTGTAGGTAATATAATTTGGCCCATGTCTATAGTTTTTGATAAGAAAGAAATGGAGTTGGAAGATTTGGTATGCAAAATAGAAGAAGGGTTATATGAATTTAATGACGTTTATCCAAAAATATTTGGAGAAAATAGGAAGGATAATTTGTCATTGATATCTAAGTGCTTGAAACAAGCTACTGATCCTCGCCCTGAGAATGAAAATACATTTACCTTTTCTAGTTGGTGTAGGTTACCAATGTATAAAACAGATTTTGGATGGGGAAAACCAACCTGGGTTACCACTTATAGTAGTTTTTCAAGGGATGTCATAATTCTAATGGATACAAAAAATGGGAATGGGATTGAAGTTATGGTGAACTTGAAAGAGGATGTTATGGAAAAATTTGAGCATGAAGTGGAACTTCTTCAACATGCTTCCTTTATTCCGAATCCGAGCAATGTTGAACACGATGCATGA 1320 0.3432 MEIELISRETIKPSLPTPSHLRIYPLSFIDNIMRRTYVPIIFFYKPNDISDQNFKISQLRKSLSQLLSKYYPFAGRLKDKITIECNDQGVSFLVAKIKNKLSEILQNPTDNLLNPLFPDELQWTNMDWSETLISFQINCFSCGGMAISTCVSHKVSDASTILNFMHDWSLINRKIEEENETGFLVLPVSNLLDGGASIFSQKDLPIFQEVLPLKRESNVVCKRFVFQPSMINFLKAMVTSSPRSIEVVTAWIYKCVVSIIGLNIETTPFNTVVDLRKKMVPPLSEKCVGNIIWPMSIVFDKKEMELEDLVCKIEEGLYEFNDVYPKIFGENRKDNLSLISKCLKQATDPRPENENTFTFSSWCRLPMYKTDFGWGKPTWVTTYSSFSRDVIILMDTKNGNGIEVMVNLKEDVMEKFEHEVELLQHASFIPNPSNVEHDA* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0921 439 Gene3D - 216 428 IPR023213 -
Tpr4g0921 439 PANTHER F21J9.9 5 433 - -
Tpr4g0921 439 Gene3D - 1 203 IPR023213 -
Tpr4g0921 439 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 433 - -
Tpr4g0921 439 Pfam Transferase family 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0921 Tpr-Chr4 8813426 8815105 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0921 1 417 Monolignol Biosynthesis Gene Families AT5G48930 25.714 1.63e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0921 - - lja:Lj4g3v2512860.1 454.136