Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0920 ATGTTGTTTCTACTTGTTCTGTTGATAATTCTTCCTTTACTTATTTTTTTCCACAAACATAAAACACATAATCCACCTGGTCCTAAAGGTCTTCCCATAATAGGGAATCTTCATCAACTAGATATTTGTAATCTTCATCTTCAATTTTCACAATTCTCAAAAATATATGGTCCTCTATTTTCACTTAAACTTGGTTTTAGAAAAGCTATTGTTGTTTCTTCAGCTGAAATTGTCAAACAAGTATTGAAAAACAATGATCTTATCTTTTGTAATAGACCAATATTCTACGGTCAACGAAAATTATCTTATAATGGGTCAGAAATTGGGTTTTCTCAATATGGTGAATTTTGGAGAGAAATAAGAAAAATTTGTGTTGTTCATATATTAGGTTCCAAACGTGTGTCATATTATTCTTCTATAAGAAAATTTGAGGTGAAGAAAATGATTCAAAAAATTTCAGGACATGCTACTTGTTCAAGTGTTACAAATTTGAGTGAGTTATTGACTTCACTCTCAACTACTACAATATGTAGAATTGCTTTTGGGAAAAACTATGAGAATCAAGGAAATGAGAGAAGTAGGTTTCATGGATTGTTTTATGAGTTACATGCTTTACTTAAAGAATTCTTTGTTTCTGATTATATTCCATTTATGGGTTGGATTGATAAACTTAGAGGATTGCATGGTCGTGTTGATACACTTTTCAAGGAGTTTGATAAGTTTTATCAAGAGATTATTGATGAACATTTGGATCCAAATAGACAACAAATTGCAGAAGAAGAAGATATTGTTGATGTCTTACTCCAATTGAAGAAGAACCATTCATTTCCCTTCCATTTCACTTTTGATCACATCAAAGCTGTCCTTGTGGATATGCTTATAGCCGCAACAGATACCACATCAGCCACATCGGTTTGGGCTATGACTACCTTAATAAAAAATCCAAGAGTAATGAAGAAAGTACAAGAAGAAATTAGGAACAATATGGGAGTTAAAAAAGACTTTTTAGAAGAAGATGATATTCAAAATTTTCCATATTTGAAAGCAGTAATTAAAGAGGTACTACGATTGCACCTACCAGCCCCACTTCTTGTGCCAAGAGAATCAAGGGAAAAATGTATTATAAGTGGCTACGATATTCCACCCAAGACAATAGTTTATGTGAATGCTTGGGCTATTCAAAGAGACCATAATTTTTGGAAAAACTCACAAGAATTTTATCCCGAGAGATTTTTAGAAAGTTCTATAAATTTTACCGGACAAGATTTTGAACTAATACCCTTTGGAGCTGGTCGTAGAATTTGCCCCGGCATATCTATGGGAGTTGCGTCATTGGAACTTACGCTTGCAAATCTTCTCTATTCTTTTGATTGGACATTGCCACATGGATTAGTGAAGGAAGATATTGATACAGAAGTGCTTCCTGGGATCTCTCAGCACAAGAAGAATCCTCTTTGTCTTGTTGCTAATATCCATATATAG 1482 0.3327 MLFLLVLLIILPLLIFFHKHKTHNPPGPKGLPIIGNLHQLDICNLHLQFSQFSKIYGPLFSLKLGFRKAIVVSSAEIVKQVLKNNDLIFCNRPIFYGQRKLSYNGSEIGFSQYGEFWREIRKICVVHILGSKRVSYYSSIRKFEVKKMIQKISGHATCSSVTNLSELLTSLSTTTICRIAFGKNYENQGNERSRFHGLFYELHALLKEFFVSDYIPFMGWIDKLRGLHGRVDTLFKEFDKFYQEIIDEHLDPNRQQIAEEEDIVDVLLQLKKNHSFPFHFTFDHIKAVLVDMLIAATDTTSATSVWAMTTLIKNPRVMKKVQEEIRNNMGVKKDFLEEDDIQNFPYLKAVIKEVLRLHLPAPLLVPRESREKCIISGYDIPPKTIVYVNAWAIQRDHNFWKNSQEFYPERFLESSINFTGQDFELIPFGAGRRICPGISMGVASLELTLANLLYSFDWTLPHGLVKEDIDTEVLPGISQHKKNPLCLVANIHI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0920 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Tpr4g0920 493 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 491 - -
Tpr4g0920 493 PANTHER CYTOCHROME P450 71B11-RELATED 2 491 - -
Tpr4g0920 493 Pfam Cytochrome P450 25 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 PRINTS E-class P450 group I signature 53 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 PRINTS E-class P450 group I signature 77 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 Gene3D Cytochrome P450 17 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g0920 493 SUPERFAMILY Cytochrome P450 25 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0920 Tpr-Chr4 8791697 8793400 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0920 2 493 Cytochrome P450 AT4G31500 46.293 1.93e-166 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0920 - - gmx:100778293 645.966