Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0912 ATGGTCATCCGAGAGTCTAGATGTATACACTATAACTTATATAAAGTAAATAAATATATGGGTGCATTTCAAGTCCTCTCCGCCAATACAATCAAAGCACTAAAATCAAGTAATCAAAAAATTGATTTAACTCCATGGGATCTTCAGTTTCTACTTGCTTCAACCAACAAAAGGGGTCTTCTTTATCACCATCCTCTAGCATCTGACCAAATCCAACGGCTGAGACACTCTCTAACCTCTGCCCTTTCCTTTTTCCAACCTCTTGCCGGCCGTCTTAAAATAACGGAACACAAAGACAACACCGTCTCGTGTTCCATTACATGCAACAATGCAGGTGTAACCTTTATTCATGCCGCATCAAAGAATACTTGTGTTGCTGACATCCTAGAATCCACCTATGTTCCTTCAGTTGTCCGTTCGTTTTTTCCTTTTATCGGAGTTAGAAACTACGAAGGCACATCAAATCCATTGTTGGCGGTTCAAGTCACGGAGTTAGTTGATGGTATCTTCATTGGCTGCACGTTCAACCATGTGGTCGGTGATGGAAACTCCACGTGGAATTTCATTAATTCTTGGGCTGAAATCTCACGTGGATGTTGTCATCATCAAATATCTAAACCTCCAACGTTAGAGCGTTGGTTTCCGAATGGTATACAAAGGCCCATACGATTTCCTTTCACTATAGAGCCACAAAATCACTCTGATAGATTGAGTTTTTCGTCATCTGATAACGAAAAACTCTGTCTATCAGAAAGAATATTTCGCTTCACAAAGGAAAAAATTGAGCAACTGAAATCGAAAGTCAACGCAGAAATTAATGATACCATAAAAATTTCTTCACTACAAGCGGTTTTAACTCACCTTTGGCGCTCTGTGATCCGTTCCAAACATCTTGATCCACAAGAAGAAGTCTACAATATGTTCGTGATAGGAGTTAGACAAAGGATTGATCCACAATTGCCAGAAGATTATTTTGGAAACGCGATTATAGGTTGTGGGGTTAAAATGAAAGCCGGGGATTTATTGAAGGAAGGTGGGCTTGGTAAAGGTGCTTGGGAGATGAACAAGTTGATTGCTTCACACTCTAATGAGAAATTAAAGAATCATTATGAGTCTTGGTTGAAAAATCCAAGCTTTATTACATCTGCTAGCATGATCAATAAAGATTTCTTGGCCACTACCAGCTCCCCATGGTTTGATGTTTATGGCAATGATTTTGGTTGGGGAAAGCCTGTGGCAGTTCGAAGTGGCAATAACATAAATGGATTTGTTAGTGCATTTTCTGGAATAGAAGAAGGTAGTATCAATCTTCAAGTGTGTCTTCCTTACAAAATTTTGGAGGCAATGGGAAATGACCCTGAGTTCATGGAGGTCGTGTCCAACTAA 1386 0.3968 MVIRESRCIHYNLYKVNKYMGAFQVLSANTIKALKSSNQKIDLTPWDLQFLLASTNKRGLLYHHPLASDQIQRLRHSLTSALSFFQPLAGRLKITEHKDNTVSCSITCNNAGVTFIHAASKNTCVADILESTYVPSVVRSFFPFIGVRNYEGTSNPLLAVQVTELVDGIFIGCTFNHVVGDGNSTWNFINSWAEISRGCCHHQISKPPTLERWFPNGIQRPIRFPFTIEPQNHSDRLSFSSSDNEKLCLSERIFRFTKEKIEQLKSKVNAEINDTIKISSLQAVLTHLWRSVIRSKHLDPQEEVYNMFVIGVRQRIDPQLPEDYFGNAIIGCGVKMKAGDLLKEGGLGKGAWEMNKLIASHSNEKLKNHYESWLKNPSFITSASMINKDFLATTSSPWFDVYGNDFGWGKPVAVRSGNNINGFVSAFSGIEEGSINLQVCLPYKILEAMGNDPEFMEVVSN* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0912 461 Gene3D - 20 221 IPR023213 -
Tpr4g0912 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 24 459 - -
Tpr4g0912 461 Pfam Transferase family 28 456 - -
Tpr4g0912 461 Gene3D - 249 451 IPR023213 -
Tpr4g0912 461 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 24 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0912 Tpr-Chr4 8676679 8678763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0912 72 418 Monolignol Biosynthesis Gene Families AT5G48930 27.731 2.25e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0912 - - mtr:MTR_4g022760 586.26