Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0908 ATGGCTGAAGGTCTATTGTTTAACACGATTGAGAAGCTGATTGGAAAGCTGGGTTCTGTGGTTGTTGAAAGCTGGAACATGAGAGATGATCTTGGAAAGCTGGTGGAAAACATGTCTGAGATCAAGGCTGTGGTTTTGGATGCAGATGAGCAGCAGAGCACCAACAACCATCAAGTTCAACTTTGGTTGGAAAAGCTCAAAGATGTTCTTGATGATGCAGATGACTTGCTTGATGACTTCAACACGGAAGAGTTAAGGCGGAAGGTGATGACCGATAACAAGAAGGCTAAAAAGGTTCGCATCTTCTTCTCGTCTTCTAACCAATTTCTATTTTCTTTCAAAATGGTTGGGAAAATTAAGGAACTTGGTAAGAGAATTGAGGCCCTTAATGTTGATCAAAAAAATTTTAATTTTACTAATCGCACTCCTGAGCAACGAGTTTTCAAACAAAGAGAAACTCATTCCTTGGTTCCCGAGGAAAAAGTCATTGGAAGAGAGGAGGAGAAGAAAAAGTTGCTAGAGATGGTTTTTGACACCAATGTGAAAGAGAATGTTTCAGTTATTTCCATAATTGGAGTTGGAGGACTTGGAAAGACTACGCTTGCTCAACTTGTATACAATAACAAGGAAGTGCAACAACATTTTGAGTTGATGAAATGGGTGTGTGTTTCTGATGATTTCGATGTAAAAGGTATTGCTGCAAAGATCATCGAATCAAACACTAATGATGCGATGGATAAAGTGGTGCAGGAACTTCGCAAAAAAGTTAAGGGCAAAAGATATTTGTTTGTCTTGGATGACATTTGGAATGAGAATCGTGATCTTTGGCTTGAATTGATGACACTACTGAAAGATGGAGCAAGAGGAAGTAAAATAATTATCACCACGAGAAGTGAACAGGTAGCCAAGATAAGTGGTTCATCTTCAATATTCTTTTTAAAGGGTCTCGATGAAAAACAATCTTGGAGATTATTCTATCAATTAGCTTTTGAGAATAAAAAAGAACCAGAGAATAAGAATTTGGTGTCAATTGGCATGGAAATTGTGAAAAAATGCTCAGGGGTTCCTCTCGCAATTAGAAGCATCGGATGCCTATTGTATTCCATGGAGGCTGAGGAGGATTGGTTAACCTTCAAGAACAAAGATCTTATAAAAATTGATGAGCAAGGTGAAAATAAAATTTTTCAACTTATCAAACTAAGTTATGATCATCTACCCTTTCATTTGAAAAAGTGTTTTGCATTTTGTTCTTTGTTTCCACAAGATTTTTTAATTGAGAAGAAAATGTTGATCCGACTTTGGATTGCGCAAGGATTTGTTCAGTCATCAGATGAAAATATAAGTTTAGAAGATATTGGTGAAAAGTACTTCATGGATTTTGTTCATAAGTCTTTCTTTCAAAATATCACCAAACAATTTGATGGCAAGGTATGTTTCCAAATGCATGATATTGTGCATCATTTGGCAAGTGTTATTTCAAGTAGTGACTATCTTTTAGTTAAAGAAAGGGGGCAACATGTCGACAAAAAAATCCGTCATGTCTCTTTTGGCTTTGAATTGGATTCTTCATGGCAGGCTCCAACTTCTCTTCTCAATGCTTACAAACTAAGGACATTTTTATTACCACTACATGGACTTTATGATAATTTTGAAATACAAGTGTCTGCTTGTATTTCCATCTTGTCAAGTTTTAGACGGTTTCGTGTGCTAAATCTCAACTGCAGAGAGCCAATGAAGATTCCATCTTGTATTGGTAGGATGAAACATTTAAGGTATCTTGACCTTTCACGTAGTCATTTGATTGAAGAGCTCCCAAGGTCTATAACTGAATTAATTAATTTGGAGACTCTTTTACTCAATCATTGTTATGGTTTGAGAGAGTTGCCCAAAGATCTTTGGAAGTTGGTAAGTCTTCGACATCTTGAGTTGGATGGTTGCCAGAGATTAACTTGTATGCCACGTGGAATAGGAAAAATGACAAATCTTCAAACACTGACACCATTTGTGTTAGATGCGACTTCCAAAGACAGTGCCAAAGCTAGTGAGCTAAGAGGGTTAAATAATTTGAGGGGAGAACTAGAGATAAAAGGCTTGGAATGCTTGAGGCATTGTCCTACAGAAGCTAAGGACATCAATTTAATGGGGAAGCCACATCTTCATCGGTTAAGATTAGAATGGAATTCACAAATTGTGGGTGATGTGAATGACTTGGAAAAAGATGATATAATTCTACATGACATAGTTATGCACTCCAATATCACATTCTTAAGAATTGTAGGATTTGGTGGTGTGACAATGTCTAGTTTGGTCAATTTATCTACAAGTTTGGATGAATTGAGTTTAGACAATTGCACAAGATTGCAATATCTTGAACTCACACCGTTGCATGTCAAATACATCTGCTTGGGGGATTTGCCGTCCCTAGAGTGGATAGTCAACGACAACAACAATGGTGATAATTCATCAACCTTTTCTGCATCACTCACAGAGATATATCTTTTTCAATTACCCAATCTTAAAGGATGGTGTAGGTGTAGTGAAGAAGAAATGTCAAAGGGTTGTTGTCATCAATTTAAGAGTCTTGAAAAGTTATGGATTGTTGATTGTCATAATCTAATTTCCATTCCACAGCACATAGATATCACGGAAATACATTTTCTTAATGTCACAGAAAAGGTATTACAACAAGCAGTCACTTATTCCAAAGTGGAGTTTCTTCAATTATATAATATACTTAATTTTAAATCTCTACGTGGAGTCTTTCAGCATCTCACTACAGTGTGTGATTTGAGTATCAGAAATTGTGAGGAGTTTGATCCGTGCAATGATGAAGATGGTTGTTACAGCATGAAATGGAAAGAACTCACAAACCTCAAAGTGTTGACTTTTCATAAACTCCCAAAAATGAAATATTTGCCTGAGGGGCTTCAGCACATTACCACTTTACAAACTCTAAGAATCACACAATGTGTCAACCTTACATCTATACCTGAATGGGCAACATCACTGCAAGGGTTATAA 3021 0.3664 MAEGLLFNTIEKLIGKLGSVVVESWNMRDDLGKLVENMSEIKAVVLDADEQQSTNNHQVQLWLEKLKDVLDDADDLLDDFNTEELRRKVMTDNKKAKKVRIFFSSSNQFLFSFKMVGKIKELGKRIEALNVDQKNFNFTNRTPEQRVFKQRETHSLVPEEKVIGREEEKKKLLEMVFDTNVKENVSVISIIGVGGLGKTTLAQLVYNNKEVQQHFELMKWVCVSDDFDVKGIAAKIIESNTNDAMDKVVQELRKKVKGKRYLFVLDDIWNENRDLWLELMTLLKDGARGSKIIITTRSEQVAKISGSSSIFFLKGLDEKQSWRLFYQLAFENKKEPENKNLVSIGMEIVKKCSGVPLAIRSIGCLLYSMEAEEDWLTFKNKDLIKIDEQGENKIFQLIKLSYDHLPFHLKKCFAFCSLFPQDFLIEKKMLIRLWIAQGFVQSSDENISLEDIGEKYFMDFVHKSFFQNITKQFDGKVCFQMHDIVHHLASVISSSDYLLVKERGQHVDKKIRHVSFGFELDSSWQAPTSLLNAYKLRTFLLPLHGLYDNFEIQVSACISILSSFRRFRVLNLNCREPMKIPSCIGRMKHLRYLDLSRSHLIEELPRSITELINLETLLLNHCYGLRELPKDLWKLVSLRHLELDGCQRLTCMPRGIGKMTNLQTLTPFVLDATSKDSAKASELRGLNNLRGELEIKGLECLRHCPTEAKDINLMGKPHLHRLRLEWNSQIVGDVNDLEKDDIILHDIVMHSNITFLRIVGFGGVTMSSLVNLSTSLDELSLDNCTRLQYLELTPLHVKYICLGDLPSLEWIVNDNNNGDNSSTFSASLTEIYLFQLPNLKGWCRCSEEEMSKGCCHQFKSLEKLWIVDCHNLISIPQHIDITEIHFLNVTEKVLQQAVTYSKVEFLQLYNILNFKSLRGVFQHLTTVCDLSIRNCEEFDPCNDEDGCYSMKWKELTNLKVLTFHKLPKMKYLPEGLQHITTLQTLRITQCVNLTSIPEWATSLQGL* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0908 1006 SUPERFAMILY L domain-like 773 1003 - -
Tpr4g0908 1006 Pfam NB-ARC domain 174 403 IPR002182 GO:0043531
Tpr4g0908 1006 PRINTS Disease resistance protein signature 187 202 - -
Tpr4g0908 1006 PRINTS Disease resistance protein signature 255 269 - -
Tpr4g0908 1006 PRINTS Disease resistance protein signature 352 366 - -
Tpr4g0908 1006 PRINTS Disease resistance protein signature 585 601 - -
Tpr4g0908 1006 Pfam Rx N-terminal domain 10 95 IPR041118 -
Tpr4g0908 1006 Gene3D Ribonuclease Inhibitor 888 1006 IPR032675 -
Tpr4g0908 1006 PANTHER OS10G0130600 PROTEIN 45 998 - -
Tpr4g0908 1006 Gene3D - 144 309 IPR027417 -
Tpr4g0908 1006 Coils Coil 63 83 - -
Tpr4g0908 1006 Gene3D - 408 490 IPR036388 -
Tpr4g0908 1006 PANTHER DISEASE RESISTANCE PROTEIN RP 45 998 IPR044974 GO:0006952
Tpr4g0908 1006 Gene3D Ribonuclease Inhibitor 521 887 IPR032675 -
Tpr4g0908 1006 Gene3D - 9 119 - -
Tpr4g0908 1006 Gene3D - 315 406 IPR042197 -
Tpr4g0908 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 416 IPR027417 -
Tpr4g0908 1006 SUPERFAMILY L domain-like 480 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0908 Tpr-Chr4 8642202 8646144 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0908 184 430 WRKY Transcription Factor Family AT5G45050 25.965 2.46e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0908 - - mtr:MTR_4g022560 1401.73