Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0906 ATGGCTGATGGTTTATTGTTTAACACGATTGAGAAGCTGATCGGGAAGCTGGGTACTATGGCTGTTGAGAGCTGGAACATGAGAGATGATCTTGAAAAGCTGGTGGAAAAAATGTCTGAGATCAAGGCTGTGGTTTTGGATGCAGAGGAGCAGCAGAGCAACAATCAAGTTCAACTTTGGTTGGAAAAGCTCAAAGATGCTCTTGAAGATGCTGAAGACTTGCTTGATGACTTCAACACTGAAGAGATAAGGCGACAGGTCATGACCAGTGACAAGAAGGCTAAGAAGTTTCGCATCTTCTTCTCATCTTCTAACCAACTTTTCTATTCATTCAAAATGGCTGGGAAAATTAAGGAACTTGGTAAGAAAATCAAGGACCTTGATGTTGGTAAAAGAACTTTTAATTTTACTAATCGCACTCCTGAGCCACGAGTTTTGAAACGAAGAGAAACTCTCCCCTTTGTTGGTGAGGAACAAGTCATCGGAAGAAAGGAGGAGGAGAAAGAGTTGCTAGAGTTATTGTTTGACACCAGCATCAATGTGAAAAACAATGTTTCAGTTATTTCCATAACTGGACTTGGAGGACTTGGAAAGACTACGCTTGCTCACCTTATATACAACAACAAAAAAGTGCAACAACATTTTGAGTTGAAGGAATGGGTGGTTGTTTCTAATCCTTTCGTTGTAAAAGGTATTGCTGCAAAGATCATCGGATCAAAAACTAATATTGTTGAGATGAATAAAGTGCAGCCGGAGCTTCGCGAAAAAGTTGAGGGCAAGAGATATCTGCTTGTCTTGGATGACATTTGGAATGAGGATGGTGATCTTTGGCTTCAATTGATGACACTACTGAAAGACGGAGCAAAAGGAAGTAAAATAATTATCACCACGAGAAGTGAGAAGGTAGCCAAGGTATGTCGTTCATCTTCAATCTTCTTTTTAAAGGGTCTTGATGAAAAACAATCTTGGAGATTATTCAGTCAACTAGCTTTTGAGAATGAAAAGGATCTAGAGAATGAGAATTTGGTGTCAATTGGCAAGGAAATTGTGAAAAAATGCTCAGGTGTTCCTCTCGCCATTAGAATCATTGGATGCCTAATGTTAACCATGGAGGATTGGTCAACTTTCAAGAACAAAGATCTTGTGAAAATTGATGAACAAGGTGGCAATAAAATTTTTCAACTTATCAAACTAAGTTATGATCATCTACCCTTTCATTTGAAAAAGTGTTTTGCATTTTGTTCTTTGTTTCCAAAAGATTATTTAATTGAGAAGCAAATGCTGATTCGACTTTGGATTGCACAAGGATTTGTTCAGTCATCAGATGAAAATAGAAGTTTAGAAGATATTGGTGAAAAGTACTTCATGGATTTTGTTCATAACTCTCTCTTTCAAAATATCACCAAACGATTTGAAGGCAAGCTGGTATGTTTCCAAATGCATGATATTGTGCATGATCTGGCAAGTTTTATTTCAAAAAGTGACTATTTTTTAATTAATGAAACGGGGCAACATGATGTTGACATAAAAACCCGTCATGTCTCTTTTAGCTTTAAATTGGATTCTAAATGGCAAGTTCCAACTTCTCTTCTCAAGGCTTACAAACTAAGGACATTTTTATTACCACTACATTATGCTGGCAATTATGAAATACAAGTGTCTGCTTGTAATTCCATCTTGTCAAGTTTTAGACGGTTTCGTGTGCTAAATCTCAACTGCACAGAGTCAATGAAGATTCCATCTTGTATTGGTAGGATGAAACATTTAAGGTATCTTGACCTTTCACGTAATCGGATTGAAGAGCTCCCAAGGTCTATAACTGAATTAATTAATTTGGAGACTCTTTTACTCAATCATTGTTATAGGTTGAGAGAGTTGCCCAAAGATCTTTGGAAGTTGGTAAGTCTTCGACATCTTGAGTTGGATGAATGCTATAGATTAACTTGTATGCCACGTGGAATAGGAAAAATGACTAATCTTCAAACACTGACACTATTTGTGTTAGATGCGACTTCCAAAGACAGTGCCAAAGCTCGTGAGCTAAGAGGGTTAAATAATTTGAGAGGAGAACTAGAGATAAGAGGCTTGGAATGCTTGAGGCATTGTCCTACAGAAGCTAAGGACATCAATTTAATGGGGAAGCCACATCTTCATCAGTTGAGATTAGAATGGAATTCATGGAATTCACAAATTGTTTGTGATGTGAATGACTTGGAAAAAGATGATATAATCCTACATGACATAGTTATGCACTCCAATATCACGTCCATAGCATTAACTGGATTTGGTGGTGTGACATTCAATTTATCTACAAATTTGGATGCATTGTGTGTATACAAATGCCCAAGATTTCAATATCTCGAACTTGCATTGTTGCATGTCAAAAAAATCACGTTGGGAGATTTGCCGTCCCTAGAGTGGGTAGTCAACGACAACAACAATGGTGATAATTCATCATCAACATTCTGTGCATCACTCACACAGATTGATCTTTATCAATTACACAATCTTAAAGGATGGTGTAGGTGTAGTGAAGAAGAAATGTCAAAGGGTTGTTGTCATCAGTTTAAGAGTCTTGAAATGTTATGGATTTATGATTGTCATAATCTAATTTCCATTCCACAGCACACAGATATCAAGAAAATGCTCCTTAGTGATGTCACATCAAAGATATTACAACAAGCAGTCACTCATTCCAATGTGGAGTTTCTTGATTTAAATAATATACTTAATTTTAAATCTCTAAGTGGAGTCCTTCAACATCTGACTACATTGTTTAGATTAACTATCGTGGATTGCACGGAGTTTGATCCGTGCAATGATGAAGATGGTTGTTACAGCATGAAATGGAAAGAACTCACAAACCTCAGAGTGTTGACTTTTGATGGAATCCCAAAAATGAAATATTTGCCTGAGGGGCTTCAGCACATTACCACTTTACAAACTCTAAGAATCAAGAAATGTGTCAACCTTACATCTATACCTGAATGGGCAACATCACTGCAAGGGTTATATATCGAACAATGCCCGATGGTGACGTCTCCGCCTGCAGCGGTGGAGGATCAATAG 3069 0.3741 MADGLLFNTIEKLIGKLGTMAVESWNMRDDLEKLVEKMSEIKAVVLDAEEQQSNNQVQLWLEKLKDALEDAEDLLDDFNTEEIRRQVMTSDKKAKKFRIFFSSSNQLFYSFKMAGKIKELGKKIKDLDVGKRTFNFTNRTPEPRVLKRRETLPFVGEEQVIGRKEEEKELLELLFDTSINVKNNVSVISITGLGGLGKTTLAHLIYNNKKVQQHFELKEWVVVSNPFVVKGIAAKIIGSKTNIVEMNKVQPELREKVEGKRYLLVLDDIWNEDGDLWLQLMTLLKDGAKGSKIIITTRSEKVAKVCRSSSIFFLKGLDEKQSWRLFSQLAFENEKDLENENLVSIGKEIVKKCSGVPLAIRIIGCLMLTMEDWSTFKNKDLVKIDEQGGNKIFQLIKLSYDHLPFHLKKCFAFCSLFPKDYLIEKQMLIRLWIAQGFVQSSDENRSLEDIGEKYFMDFVHNSLFQNITKRFEGKLVCFQMHDIVHDLASFISKSDYFLINETGQHDVDIKTRHVSFSFKLDSKWQVPTSLLKAYKLRTFLLPLHYAGNYEIQVSACNSILSSFRRFRVLNLNCTESMKIPSCIGRMKHLRYLDLSRNRIEELPRSITELINLETLLLNHCYRLRELPKDLWKLVSLRHLELDECYRLTCMPRGIGKMTNLQTLTLFVLDATSKDSAKARELRGLNNLRGELEIRGLECLRHCPTEAKDINLMGKPHLHQLRLEWNSWNSQIVCDVNDLEKDDIILHDIVMHSNITSIALTGFGGVTFNLSTNLDALCVYKCPRFQYLELALLHVKKITLGDLPSLEWVVNDNNNGDNSSSTFCASLTQIDLYQLHNLKGWCRCSEEEMSKGCCHQFKSLEMLWIYDCHNLISIPQHTDIKKMLLSDVTSKILQQAVTHSNVEFLDLNNILNFKSLSGVLQHLTTLFRLTIVDCTEFDPCNDEDGCYSMKWKELTNLRVLTFDGIPKMKYLPEGLQHITTLQTLRIKKCVNLTSIPEWATSLQGLYIEQCPMVTSPPAAVEDQ* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0906 1022 Gene3D Ribonuclease Inhibitor 526 850 IPR032675 -
Tpr4g0906 1022 PANTHER DISEASE RESISTANCE PROTEIN RP 25 995 IPR044974 GO:0006952
Tpr4g0906 1022 PRINTS Disease resistance protein signature 187 202 - -
Tpr4g0906 1022 PRINTS Disease resistance protein signature 256 270 - -
Tpr4g0906 1022 PRINTS Disease resistance protein signature 353 367 - -
Tpr4g0906 1022 PRINTS Disease resistance protein signature 584 600 - -
Tpr4g0906 1022 ProSiteProfiles Leucine-rich repeat profile. 588 609 IPR001611 GO:0005515
Tpr4g0906 1022 Gene3D Ribonuclease Inhibitor 878 1021 IPR032675 -
Tpr4g0906 1022 Pfam NB-ARC domain 182 401 IPR002182 GO:0043531
Tpr4g0906 1022 Pfam Rx N-terminal domain 10 92 IPR041118 -
Tpr4g0906 1022 Gene3D - 8 117 - -
Tpr4g0906 1022 Gene3D - 406 489 IPR036388 -
Tpr4g0906 1022 PANTHER OS05G0414200 PROTEIN 25 995 - -
Tpr4g0906 1022 Coils Coil 31 51 - -
Tpr4g0906 1022 Gene3D - 316 404 IPR042197 -
Tpr4g0906 1022 Coils Coil 57 81 - -
Tpr4g0906 1022 SUPERFAMILY L domain-like 479 1009 - -
Tpr4g0906 1022 Gene3D - 147 312 IPR027417 -
Tpr4g0906 1022 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 414 IPR027417 -
Tpr4g0906 1022 SMART LRR_typ_2 633 657 IPR003591 -
Tpr4g0906 1022 SMART LRR_typ_2 586 609 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0906 Tpr-Chr4 8629006 8633085 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0906 184 665 WRKY Transcription Factor Family AT5G45050 21.974 3.03e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0906 - - mtr:MTR_4g022560 1306.97