Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0905 ATGGCTGAAGGTTTGTTGTTTAACACGATTGAGAAGCTGATCGGGAAGCTGGGTTCTATGGCTGTGGAGACCTGGAACATGAGAGATGATCTTGAAAAGCTGGTGGAAAACATGTCTGAGATCAAGGCTGTGGTTTTGGATGCAGAGGAGCAGCAGAGCAACAGCCATCAAGTTCAACTTTGGTTGGAAAAGCTCAAAGATGCTCTTGATGATGCAGATGACTTGCTTGATGACTTCAACACTGAAGAGTTAAGGCGACAGGTGATGACCAGTGACAAGAAGGCTAAGAAGTTTCGCATCTTCTTCTCATCTTCTAACCAAATTTTCTATTCATTCAAAATGGCTGGGAAAATTAAGGAACTTGGTAAGATAATTCAGGACCTTAATGTTGGTAAAAGAACTTTTAACTTTACAAATCGTACTCCTGAGCGACGAGTTTTGAAACAAAGAGAAACTCATTCCTTTGTTCGTGAGGAAGAAGTCATCGGAAGAGAGGAGGAGAAGAAAGAGTTGCTAGAGTTGTTGTTTGACAACAGCATCAATGTGAAAGACAATGTTTCAGTTATTTCCATAATTGGAGTTGGAGGACTTGGAAAGACTACGCTTGCTCAACATGTATACAACGACAAACAAGTGCAACAACACTTTGAATTGAAGAAATGGGTGTGTGTTTCTGATGATTTTGATGTAAAAGGTATTGCTGCAAAGATCATCGGATCAAAAACTAATATTGTTGAGATGGATAAAGTGCAGCTGGAGCTTCGCGAAAAAGTTGAGGGCAAGAGATATCTGCTTGTCTTGGATGACATTTGGAATGAGGATGGTGATCTTTGGCTTCAATTGATGACACTACTGAAAGACGGAGCAAAAGGAAGTAAAATAATTATCACCACGAGAAGTGAGATGGTAGCCAAGGTATGTCGTTCATCTTCAATCTTCTTTTTAAAGGGTCTTGATGAAAAACAATCTTGGAGATTATTCAGCCAACTAGCTTTTGAGAATGAAAAGGATCTAGAGAATGAGAATTTGGTGTCAATTGGCAAGGAAATTGTGAAAAAATGCTCAGGTGTTCCTCTCGCCATTAGAATCATTGGATGCCTAATGTTAACCATGGAGGATTGGTCAACTTTCAAGAACAAAGATCTTGTGAAAATTGATGAACAAGGTGGCCATAAAATTTTTCAACTTATCAAACTAAGTTATGATCACCTACCCTTTCATTTGAAAAACTGTTTTGCTTTTTGTTCTTTGTTTCCACAAGATTTTGAAATTGAGAAGCAAATGCTGATTCGCCTTTGGATTGCACAAGGATTTGTTCAGTCATCAGATGAAAATATAAGTTTAGAAGATATTGGTGAAAAGTACTTCATGGATTTTGTTCATAAGTCTTTCTTTCAAAATATCACCAAACGATTTGATGGCAAGGTACATTTCCAAATGCATGATATTGTGCATGATCTGGCAAGTGTTATTTCAAGAAGTGAATATCTTTTAGTTAAAGAAAGGGGGCAACATGTTGACAAAAAAAATCGTCATGTCTCTTTTGGCTTTAAATTGGATTCTTCATGGAAGGTTCCAACTTCTCTTCTCAATGCTTACAAACTAAGGACATTTTTATTGCCACTTCATACAATTTATTATTATGAATCTTCAATGGAAATGTCTGCGCATGCTTGTATTTCCATCTTGTCAAGTTTTAGTCGGTTTCGTGTGTTGCATCTTAATTGCACAGTGTCAATGAAGATTCCATCTTGTATTGGTAGGATGAAACATCTAAGGTATCTTGACCTTACTTTTAGTATTAAAGTTGAAGAGCTCCCAAGGTCTATAACTGAATTAATTAATTTGGAGACTCTTTTACTCAATTATTGTGAAAGTTTGAGAGAGTTGCCCAAAGATCTTTGGAAGTTGGTAAGTCTTCGACATCTTGAGTTGAATGGTTGCAGTAGCTTAACTTATATGCCACGTGGAATAGGAAAAATGACTAATCTTCAAACACTGACACTATTTGTGTTAGATGCGACTTCCAAAGACAGTGCCAGAGCTAGTGAGCTAAGAGGATTAAATAATTTGAGGGGAGAACTAAAGATAACAGGCTTGCAATGCTTGAGGCATTGTCCTACAGAAGCTAAGGACATCAATTTAATGGGGAAGCCACATCTTCATCGGTTATCATTAAATTGGAATTATGAAGAAATTGTTGGTGATGTGAATGACTTGGATAAAGATGATATAATCCTACATGACATAGTTATGCACTCCAATATCACGTCCTTGAAAATAAGGGGATTTGGTGGTGTGACAATGTCTAGTTTGGTCAATTTATCTACAAGTTTGGATAAATTGACTGTAGAGGGTTGCACAAGATTGCAATATCTCGAAATTGCACCATTGCATGTCAAATGCATCTGGTTGTGGGATTTGCCGTCCCTAGAGTGGATAGTCAACAACAACAACAACAATGGTGATAATTCATCAACATTTTGTGCATCACTCGCAGAGATAGGTCTTGAAGATTTACCCAATCTAAAAGGATGGTGTAGGTGTAGTGAAGAAGAAATGTCAAAGGGTTGTTGTCATCAGTTTAAGAGTCTTGATCATTTACTGATTGATGACTGTCGTAATCTAATTTCCATTCCACAGCACACAGATATCAAGGTAATAGACCTTGGTGATGTCACATCAAAGATATTACAACAAGCAGTCACTCATTCCAAAGTGGAGTTTCTAAAATTAAATAATATACTTAATTTTAAATCTCTACGTGGAGTCTTTCAGCATCTCACTAGCGTGTGTGATATGCATATCAGTAATTGTGAGGAGTTTGATCCGTGCAATGATGAAGATGGTTGTTACAGCATGAAATGGAAAGAACTCACAAACCTCAAAGTGTTGACTTTTGATAAACTCCCAAAAATGAAATATTTACCTGAGGGGCTTCAGCATATTACCACTTTACAAACTCTAAGAATCATAGATTGTGTCAACCTTACATCTATACCTGAATGGGCAACATCACTTCAAGTATATATACGTGGATGCCCGATGGTGACGCCTCTGCCTACAGCGGTGGAAGATCAATAG 3084 0.3745 MAEGLLFNTIEKLIGKLGSMAVETWNMRDDLEKLVENMSEIKAVVLDAEEQQSNSHQVQLWLEKLKDALDDADDLLDDFNTEELRRQVMTSDKKAKKFRIFFSSSNQIFYSFKMAGKIKELGKIIQDLNVGKRTFNFTNRTPERRVLKQRETHSFVREEEVIGREEEKKELLELLFDNSINVKDNVSVISIIGVGGLGKTTLAQHVYNDKQVQQHFELKKWVCVSDDFDVKGIAAKIIGSKTNIVEMDKVQLELREKVEGKRYLLVLDDIWNEDGDLWLQLMTLLKDGAKGSKIIITTRSEMVAKVCRSSSIFFLKGLDEKQSWRLFSQLAFENEKDLENENLVSIGKEIVKKCSGVPLAIRIIGCLMLTMEDWSTFKNKDLVKIDEQGGHKIFQLIKLSYDHLPFHLKNCFAFCSLFPQDFEIEKQMLIRLWIAQGFVQSSDENISLEDIGEKYFMDFVHKSFFQNITKRFDGKVHFQMHDIVHDLASVISRSEYLLVKERGQHVDKKNRHVSFGFKLDSSWKVPTSLLNAYKLRTFLLPLHTIYYYESSMEMSAHACISILSSFSRFRVLHLNCTVSMKIPSCIGRMKHLRYLDLTFSIKVEELPRSITELINLETLLLNYCESLRELPKDLWKLVSLRHLELNGCSSLTYMPRGIGKMTNLQTLTLFVLDATSKDSARASELRGLNNLRGELKITGLQCLRHCPTEAKDINLMGKPHLHRLSLNWNYEEIVGDVNDLDKDDIILHDIVMHSNITSLKIRGFGGVTMSSLVNLSTSLDKLTVEGCTRLQYLEIAPLHVKCIWLWDLPSLEWIVNNNNNNGDNSSTFCASLAEIGLEDLPNLKGWCRCSEEEMSKGCCHQFKSLDHLLIDDCRNLISIPQHTDIKVIDLGDVTSKILQQAVTHSKVEFLKLNNILNFKSLRGVFQHLTSVCDMHISNCEEFDPCNDEDGCYSMKWKELTNLKVLTFDKLPKMKYLPEGLQHITTLQTLRIIDCVNLTSIPEWATSLQVYIRGCPMVTPLPTAVEDQ* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0905 1027 SUPERFAMILY L domain-like 479 878 - -
Tpr4g0905 1027 SUPERFAMILY L domain-like 865 1010 - -
Tpr4g0905 1027 PANTHER DISEASE RESISTANCE PROTEIN RP 30 1005 IPR044974 GO:0006952
Tpr4g0905 1027 PANTHER OS10G0130600 PROTEIN 30 1005 - -
Tpr4g0905 1027 Gene3D - 317 405 IPR042197 -
Tpr4g0905 1027 Gene3D Ribonuclease Inhibitor 678 886 IPR032675 -
Tpr4g0905 1027 Gene3D Ribonuclease Inhibitor 887 1023 IPR032675 -
Tpr4g0905 1027 Gene3D Ribonuclease Inhibitor 518 676 IPR032675 -
Tpr4g0905 1027 Pfam NB-ARC domain 183 402 IPR002182 GO:0043531
Tpr4g0905 1027 Gene3D - 407 489 IPR036388 -
Tpr4g0905 1027 Gene3D - 143 313 IPR027417 -
Tpr4g0905 1027 Coils Coil 31 51 - -
Tpr4g0905 1027 Pfam Rx N-terminal domain 9 93 IPR041118 -
Tpr4g0905 1027 Gene3D - 9 118 - -
Tpr4g0905 1027 PRINTS Disease resistance protein signature 188 203 - -
Tpr4g0905 1027 PRINTS Disease resistance protein signature 257 271 - -
Tpr4g0905 1027 PRINTS Disease resistance protein signature 354 368 - -
Tpr4g0905 1027 PRINTS Disease resistance protein signature 635 651 - -
Tpr4g0905 1027 Coils Coil 62 82 - -
Tpr4g0905 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 415 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0905 Tpr-Chr4 8618225 8622666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0905 185 428 WRKY Transcription Factor Family AT5G45050 26.894 3.98e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0905 - - mtr:MTR_4g022560 1361.28