Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0891 ATGGGAAGGCAAAAGCATTCTGATTCAAGTTGTAATAACAACCATGATCCTAAGAATAAAAGCCTATTTCATATTATTAAGTATCATCCCTTATGTCATCATTTCATACAAAAAAGATATGCAAACATGATGGGTGGTGAGGAAACAAATGATGCAGGAACTTTACTTGAACAAAGGAATGAGGCCTTTTCTTGTGACAATGGGAAGAACCTAAGCCTTGCTAAGTTAAGAAACTCAAATGTTGAAGAAAAGGTGACACCACATTCTTCAGTTGGAAAAAGATGTGTACAATGTGTTGATGCTACATCTAGAAGTGATTACTGGGAATGTAACTTGTGTTGCAAGCATCACCGACCAACAAAAAATGACTTGCTTGCACGAAAAGTAATAGATAAAAAGAGTTATAAAGTGGAAAGTAATGCAAGAAAACACATATTTGGTGTTTATGCTCATTTATGCAGGCATTTTGTTGGTGGCTTGGAAACAACCAACAAGAACAAAGAAATATTATTAACATTTCTTCATGATCCTGTCTTTCCTACGGTCTATCACTTCCATAAACAACATGTGCAAAGACGAAAAATGAAATTAAATAGATCCGAATCATCTCCTCTTCCTTACTCATCATCGAAAACAAAATGGAAAGGAACATTATATTGTGACAATATAACACAAGAGTCAGTTCGGCTTGAGTCCTCAAAAACAGCTTATGAACAGGTCATGCCATCAGTAACAAAAGAGAAAGTAAATGGAAATTTCAAAATGAGTGAAGGAGTTATAATAGTAAGAAATGTTAAGGTTTCTTCGGTATGTGCAAAAGGTCAAAATAGTCTTAAACAAAAAATAGAGAATGTAAGTGGAGAAAGCGAAAAAGAAAAGATTCGTGTTGGGATGGATTCGGTCATTCATAAACTTCCACAAGGTCAAAGAATATCAGATAAATTGAAAGAAGAAATTTTGAAGAAATTGACAGAACCTATTATTACGAGAGAAGTTCGATACAAGAACTCGATAAGAAGAATCATGTCTCTTCAAGAACCACTATTAAGTTATTATCAACAAGAAGAGACGCGTTCCCCATTGAGAATGTTGATACCTTTCCAAAGAATTCTTTCATTACCTGATCTTCGATCTTTTTCATATGCTTCTGTGAATGGAGATATTTCTGATTTGAGTCAAGAAAATCTTCCCATTATAGATGAAAATGATTTGGTGATTAGTAATAATGTGAAATCAGGATCAGATTGTATCAATAAGATTAATGGAAAGGTGGATTTAAGAAATTGTGAAAATTTCAGTGACCAAGATATTGATGCAAATAAAGAATACAAGGCTGCAATAGCAGCATCAGCATCAGATTCAATATCTAAGCTAGCACCGATCGATAGACCGGATAATATGGCTCAAAAAATGGAGATTCTAAGCAAGAAGTTGAACCATGAGATTCCTCATATTCATGTGGATACCAAATACAAAGATGAATTTAACTATGTGAAATATGTACTTGAAATATCTGGACTCACCAGTAATGAGAGCATTTCAGCATGGTATTCTAAAGACACTCCAATTGATCCATCATTATATGAAGAAATGGAAAATGATCCTAATTTTTGTGCTAATAAAGGTGATCAATGTAATCACCATGTATTGTTTGATTTAATTAATGAGACAGTGTTGGAAATTTATGGAAGGTCACATTGTTACCCTCCTATAGGGTGTCACATTCTCCATAAAGTTTGGACTCATATGAGTAAGTCATTGTGTTTGAGATCTAAAGTTGGTCAAAAAATTGATGATCATATAAGTAAAGATTTATCAAAAAGTGATGGTTGCTTCAATGTTCAATTCTATGGTGAAGATGTTGGTTTAGAGGTGGAAGAAATGATTTTTCAGGATCTATTGGTGGAAATAATGTGGGACTTTGCATGTTTATGA 1935 0.3364 MGRQKHSDSSCNNNHDPKNKSLFHIIKYHPLCHHFIQKRYANMMGGEETNDAGTLLEQRNEAFSCDNGKNLSLAKLRNSNVEEKVTPHSSVGKRCVQCVDATSRSDYWECNLCCKHHRPTKNDLLARKVIDKKSYKVESNARKHIFGVYAHLCRHFVGGLETTNKNKEILLTFLHDPVFPTVYHFHKQHVQRRKMKLNRSESSPLPYSSSKTKWKGTLYCDNITQESVRLESSKTAYEQVMPSVTKEKVNGNFKMSEGVIIVRNVKVSSVCAKGQNSLKQKIENVSGESEKEKIRVGMDSVIHKLPQGQRISDKLKEEILKKLTEPIITREVRYKNSIRRIMSLQEPLLSYYQQEETRSPLRMLIPFQRILSLPDLRSFSYASVNGDISDLSQENLPIIDENDLVISNNVKSGSDCINKINGKVDLRNCENFSDQDIDANKEYKAAIAASASDSISKLAPIDRPDNMAQKMEILSKKLNHEIPHIHVDTKYKDEFNYVKYVLEISGLTSNESISAWYSKDTPIDPSLYEEMENDPNFCANKGDQCNHHVLFDLINETVLEIYGRSHCYPPIGCHILHKVWTHMSKSLCLRSKVGQKIDDHISKDLSKSDGCFNVQFYGEDVGLEVEEMIFQDLLVEIMWDFACL* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0891 644 PANTHER PROTEIN TRM32 388 644 IPR044257 -
Tpr4g0891 644 PANTHER PROTEIN TRM32 298 392 IPR044257 -
Tpr4g0891 644 Pfam Domain of unknown function (DUF4378) 494 636 IPR025486 -
Tpr4g0891 644 PANTHER DUF4378 DOMAIN PROTEIN 388 644 - -
Tpr4g0891 644 PANTHER DUF4378 DOMAIN PROTEIN 298 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0891 Tpr-Chr4 8491546 8494827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0891 157 630 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 26.643 3.35e-36 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0891 - - cam:101499034 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0891 4 8491546 8494827 Tpr4g0891 4 8491546 8494827 ECH