Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0871 ATGTCTTCCTGCTTCAATATACGCCGCAGATCTAATCTAAACAGGAAGAAGAGGTACGATGTGTACTTTAGTTTCTGCGACGAAGATGCACGTTCTTTTGTTTTGGGTATCTATAAGGGTCTTACTTCTTCAGAACGTGAAATTGTTGTTTTCTGGGACGATAATAAGAGGAGGATTAGAAGAGGAGGAGAACGAGAAATACCAAGCTCAGTTCTGAATGTAATTCAAGATTGCAAACTTGTTGTAATTGTATTTTCAACAAATTATTTTAATTCAAGATGGTGTCTTCAAGAATTGGAAAAAATAACTGAATGTTGCCGAACCACAGATAGTAGTCTTATGCTTCTTACTTTATTCTATGATCGTGTCGTCGGTATCCGTATCTCGTTCGGAATTTCGGAGAAAAGTATAGCTATGTTTGAACAAGAGACCTTTCATGAATTTCTTGATAGAATCTCTAAACAAGAAATCTTCCAACATGGGGATAAGTTCATGTCTTGGGTGGCAACCATCAGTCATAATAAAGCTATGACATATGCAGGATCAACATATTTGGGACACGTCTTCACATACAAGAGCAAAAGTGAACATATTGAGAATGTAGTTGAACTAGCTACTCATGTGATAACAGGGAAGAGAGGCATGTTCAATGGTTTGTATACAGAGAGCTTAAATTCTCGTGTGCAAGATGTGATTCAACTATTGAAACAGTCAAAATCTCCTCTCATACTAGGGATATGGGGGATGTCAGGGATTGGTAAAACAACCATTGCCAAAGCCATTTATGGTCAGGTTGGTTCCTATTTTGCGCACAAGTGCTTGATCGAAAATGTCAAGAGATCAGTTCAGAATAAAAGTGAAACTCTAGTTTCTTTACAAGAGAAAATTCTTTTTGATATGGCCAGAGCTCCTGAAATAAATATATCTACAATTGAGTCAGGAAAAGTGATTTTAAAAGAAAGACTTCGAGGTAAAAGGGTACTTCTTGTTCTTGACGATGTTGATAATTTGGAGCAACTAAATGCTTTGTGTGGAAGTCATGAATGGTTTGGTGAAGGTAGCAAAATAATCATCACGACAAGGGATAGGAAACTACTAAAGGAGCATGGAGCTGACCATATATACAGAGTGAAAGAACTGGACGAAAATGAATCGCTTGAGCTTTTTAATTGGAACGCGTTCAGCCAAGCAACTTCTCATGAAGGTTTTGCTGACCTTTCCAGACAGGTAGTTGCTTATTCTGGGGGATTGCCTCTTGCTCTTACAGACCTTGGGAAACATTTCAATTCGAAAAAAGTAGCTACCTGGGAGTCGAAGTTGCGTTACTTCACAAGTTATCACTATAATGGTGTACAAGGAACTCTAGAAAGTAGTTTAAATGATTTGAATGATGAAGAGAAACAAATATTCTTTGATCTCGCGTATTTCTATATCGGGATAGACCAACATGATGTCCAATCTTTAAATAGTTCAACACAATGTACAAATCTTCTAATAAGTCTCCTTGAAGACAAAAGCTTTGTAACCATTGATGAGAATAACAAGATTCAAATGCATGTTTTGCACAAAGCCACAGCAGAAGCTATCATTACGAGGGAATCAAGTAATAACACTGATCAGCCGAAGATGTACGATGTTTTCTTGAGTTTCAGAGGGGAAGATAGTCGTGCAAAGTTCATGTCACATCTGCATTCCTCTTTTCAAAATGCGGGGATTGATTCTTTCAGAGATGATGACAAGATTCAACGAGGAGATCAAATCTCAATCTCATTGTTGCAAGCAATTGGACGGTCTAGACTTGCTATCGTTGTTTTCTCAAAAAATTATGCTAATTCAAGATGGTGTTTGCTAGAGTTGGAGAAGATAATGGAAATTGGCAGAGATAGGGGTTTGGTCGTTGTGCCGGTGTTCTATGAGGTGGATCCCTCCGATGTACGTCATCAGAAAGGCCATTTTGGGAAAGTTTTTGATGATCTTATATCAAAAAACTCAGTGGATGAATCCACAAAGAGTCGTTGGCAAAGAGATCTCTATGAAATTTGTGGCATTGCAGGGTTTGTCCTCATAGATTCCAGGAATGAAAGTGCTGATATCAAGAATATTGTGGAACATGTCACTCGTTTGCTAGATAGGACACAATTATTTGTTGCTGAACATCCGGTGGGTGTAGAATCTCGCGTGGAAGCTGTGACTAAGCTACTAAACATCGAAAAATCAGAAGATGTTTTACTTCTAGGGATATGGGGAATGGGGGGTACGGGTAAATCAACCATTTCCAAAGCCATTTACAACAAAATTGGGAAAGAATTTGAGGGAAGGAGCTTTCTTTTGGGTATAAGGGAAATTTGGAAGACACATACTAATCAAGTTTCACTACAGCAACAGGTACTTTGTGATGTTTACAAGACAACAGCATTGAAGATACGTGACATCGAATCAGGGAAACATATATTGAAGGAAAAACTTTCTAAGAATAGGGTGCTTTTTGTGCTTGATGATGTGGATGAATTGGACCAACTAAAGGCTTTGTGTGGAAGCCGTGAATGGTTTGGTCCGGGAAGTAGAGTAATAATCACAACGAGAGATATGGATCTTCTTAGATCATGTGGAGTTGATCAAGTGTATACAATAGAAGAAATGGACGAAAGTGAATCTCTAGAGCTTTTCAGCTGGCATGCATTCAAGCAACCAAGTCCGACAGAGGATTACGCTACACATTCAGCAGATGTTATTGCTTATTCTGGGAGATTGCCACTAGCACTTGAAGTCATTGGGTCCTATTTGTCTAATTGTGAAATAACAGAGTGGCAGAAAGTTTTGGAGAAACTCAAATGTATTCCCCATGATCAAGTACAGAAGAAGCTAAAAGTAAGCTTTGATGGTTTAAAAGATTTTACAGAGAAACAAATATTCCTTGATATTGCTTGTTTCTTTATTGGAATGGACAAAAAGGATGTAATGGAAATATTAAATGGGTGTGGGTTTTTTGCTGATATTGGAATCAAAGTCCTTGTTGAGCGAGCCCTTTTAACTATTGACAATAGGAACAAGCTTAGAATGCATGATTTGTTAAGAGACATGGGAAGACAAATAATTTTTGAGGAATCACCATCAGATCCTGAAAAGCGCAGTAGGGTTTGGCGCTGTGATGAAGTGCTTGATATATTATCAAAGGATAAGGGAACAGAAGCTGTCAAGGGACTGGCTTTGGAGTTTCCAAGAAAAGATTGTCTGGAAACCAAGGCATTCAAGAAGATGAATAAACTCAGATTGCTTCGCCTCGCTGGGGTGAAGCTTGAGGGAGATTTTAAATACCTTTCAGGAGATCTTAGGTGGCTTTACTGGCATGGATTTCCATTAACTTACATTCCTGCAGAATTTCAGCAAGGAAGTCTAGTTGCAATTGAATTAAAATATAGTATGCTCAAACAAATTTGGAACAAGAGCCAGAAGCTAGAGAATCTAAAAATTCTTAATCTTAGTCATTCTTTAGATTTGACTGAAACCCCGGACTTTTCATTCTTGCCTAATCTTGAAAAGCTAGTACTCAAAGACTGTCCAAGTTTGTCTACAGTCTCCCATAGCATTGGATCTCTGCATAAACTTCTTCTGATAAATTTGACAGACTGCACAGGTCTTCGGAAACTTCCGAGAAGCATCTATAAATTAAAGTCTCTAGAAACTTTGATTCTTTCAGGATGCTCCAAGATTGACAAATTGGAGGAGGATTTGGAACAGATGGAATCATTGATTACCTTGATTGCGGATAAGACTGCCATAACAAAAGTGCCATTTTCAATAGTAAGATTGAAAAACATTGGATATATTTCTTTAAGTGGCTTTGAAGGATTTTCTCGTGATGTATTCCCTTCTCTCATTCGGTCTTGGATGTCGCCATCAAATAATGTGATATCCCTAGTTCAATCATCTGTGTCCATGTCATCATTTGGTACTTCAAAAGACCTTCAAAAACTTCGAATTCTTTGTGCGGATTGTGATTCAGATTTACAACTAACTCAAGATGTAGCAAGATTTTTGGATGTATTAAAAGCCACAAATTGTCAGAACTTTGAAGCAAGTGCAAGTTCAACTACATCAGGGATCTCTGATGTGCATGCTTCTCCCTTAATTGGTGATTGCCTTGGTCATGTTCGCACTTTAGGGTCAAAGAATCACTTGAAATCTCTCTTAATTCAAATGGGAACAAAATTTCAAATCTCTAATGTTGCTGAAGACCGTGTTTTAGAGACTGCAGATGGGACTTGGGATTCATTTTTGCTCGGCTGTGACAATAAATCTGATTGGTTAACTTTCAGTTGCAAAGGTTGTTCTATAATATTTGACGTCCCAACAATGAAGGAGAGTACCCTGAACAGCATGATGTTGTCTGTTGCCTATTACTCTTGCTCGGATAACATAACATCAGAAGGTTGCCAAGGTGTTTTAATCATAAATTACACAAAGACAACCATTCATGCATATAAAAGAGATACACTAACCTCCTTTGAGGATGAGGATTGGCAGAGCATAACTTCAAATCTAGAACCTGGTAACAAAGTGGAAGTTGTGGTTGTTTTTGGGGAGGGTTTCATTGTTGATAAGACTACAGTATCTCTCTTATATGATGAATCACTCGACAAAGAAATGGAACACTGTCATGTAGTAGACAAGGAGGATGTTATTGTTTCTTGTAATGGCGGTAATAATGTTAGTGTTTCTGGTGGTGATAATGAAGCCATCAATCGCTTTGGAGACGAAACGGTGAACCACATGCAGACCACCAGGCATGCTGATGGATTATATGCTGATGTCGTGGAACCAGTACAACTAGTAACACATGACTCTGACCAGCTTGCAGAGGCCGCAGTTGAAGAGATTCCTGCAGAGGCAGCAGTTGAGGAGATTCCTGCAGCTGAAACATATGGTGATCAGGAGCAACAGGTTCCTCTACCCGAGTGTCAGCCTGAGCAGCAGGCAACATCTGAGCCTGAGGCCATTGGGATGGCCTTAGGAGCTCATATGTTGGATGCCCTTAGAGAGCTGACGGCTAATTTCTTCCAACTAGAGCAGACTGTTGCTGCTAGGTTGAATGCAGTAGAAGTCAGATTAGAGGTGCTTGAGGATGTCATGGCCCAGATACCACGTTGGTCGAATTCTGAATCCAAACACGTTGAGAGCTAG 5181 0.3909 MSSCFNIRRRSNLNRKKRYDVYFSFCDEDARSFVLGIYKGLTSSEREIVVFWDDNKRRIRRGGEREIPSSVLNVIQDCKLVVIVFSTNYFNSRWCLQELEKITECCRTTDSSLMLLTLFYDRVVGIRISFGISEKSIAMFEQETFHEFLDRISKQEIFQHGDKFMSWVATISHNKAMTYAGSTYLGHVFTYKSKSEHIENVVELATHVITGKRGMFNGLYTESLNSRVQDVIQLLKQSKSPLILGIWGMSGIGKTTIAKAIYGQVGSYFAHKCLIENVKRSVQNKSETLVSLQEKILFDMARAPEINISTIESGKVILKERLRGKRVLLVLDDVDNLEQLNALCGSHEWFGEGSKIIITTRDRKLLKEHGADHIYRVKELDENESLELFNWNAFSQATSHEGFADLSRQVVAYSGGLPLALTDLGKHFNSKKVATWESKLRYFTSYHYNGVQGTLESSLNDLNDEEKQIFFDLAYFYIGIDQHDVQSLNSSTQCTNLLISLLEDKSFVTIDENNKIQMHVLHKATAEAIITRESSNNTDQPKMYDVFLSFRGEDSRAKFMSHLHSSFQNAGIDSFRDDDKIQRGDQISISLLQAIGRSRLAIVVFSKNYANSRWCLLELEKIMEIGRDRGLVVVPVFYEVDPSDVRHQKGHFGKVFDDLISKNSVDESTKSRWQRDLYEICGIAGFVLIDSRNESADIKNIVEHVTRLLDRTQLFVAEHPVGVESRVEAVTKLLNIEKSEDVLLLGIWGMGGTGKSTISKAIYNKIGKEFEGRSFLLGIREIWKTHTNQVSLQQQVLCDVYKTTALKIRDIESGKHILKEKLSKNRVLFVLDDVDELDQLKALCGSREWFGPGSRVIITTRDMDLLRSCGVDQVYTIEEMDESESLELFSWHAFKQPSPTEDYATHSADVIAYSGRLPLALEVIGSYLSNCEITEWQKVLEKLKCIPHDQVQKKLKVSFDGLKDFTEKQIFLDIACFFIGMDKKDVMEILNGCGFFADIGIKVLVERALLTIDNRNKLRMHDLLRDMGRQIIFEESPSDPEKRSRVWRCDEVLDILSKDKGTEAVKGLALEFPRKDCLETKAFKKMNKLRLLRLAGVKLEGDFKYLSGDLRWLYWHGFPLTYIPAEFQQGSLVAIELKYSMLKQIWNKSQKLENLKILNLSHSLDLTETPDFSFLPNLEKLVLKDCPSLSTVSHSIGSLHKLLLINLTDCTGLRKLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESLITLIADKTAITKVPFSIVRLKNIGYISLSGFEGFSRDVFPSLIRSWMSPSNNVISLVQSSVSMSSFGTSKDLQKLRILCADCDSDLQLTQDVARFLDVLKATNCQNFEASASSTTSGISDVHASPLIGDCLGHVRTLGSKNHLKSLLIQMGTKFQISNVAEDRVLETADGTWDSFLLGCDNKSDWLTFSCKGCSIIFDVPTMKESTLNSMMLSVAYYSCSDNITSEGCQGVLIINYTKTTIHAYKRDTLTSFEDEDWQSITSNLEPGNKVEVVVVFGEGFIVDKTTVSLLYDESLDKEMEHCHVVDKEDVIVSCNGGNNVSVSGGDNEAINRFGDETVNHMQTTRHADGLYADVVEPVQLVTHDSDQLAEAAVEEIPAEAAVEEIPAAETYGDQEQQVPLPECQPEQQATSEPEAIGMALGAHMLDALRELTANFFQLEQTVAARLNAVEVRLEVLEDVMAQIPRWSNSESKHVES* 1727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0871 1726 SUPERFAMILY Toll/Interleukin receptor TIR domain 535 674 IPR035897 -
Tpr4g0871 1726 Gene3D - 536 707 IPR035897 -
Tpr4g0871 1726 SMART till_3 18 174 IPR000157 GO:0007165
Tpr4g0871 1726 SMART till_3 543 683 IPR000157 GO:0007165
Tpr4g0871 1726 Gene3D - 217 373 IPR027417 -
Tpr4g0871 1726 Gene3D - 708 874 IPR027417 -
Tpr4g0871 1726 PRINTS Disease resistance protein signature 744 759 - -
Tpr4g0871 1726 PRINTS Disease resistance protein signature 821 835 - -
Tpr4g0871 1726 PRINTS Disease resistance protein signature 914 928 - -
Tpr4g0871 1726 PRINTS Disease resistance protein signature 1221 1237 - -
Tpr4g0871 1726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 473 IPR027417 -
Tpr4g0871 1726 SMART AAA_5 240 380 IPR003593 -
Tpr4g0871 1726 SMART AAA_5 741 878 IPR003593 -
Tpr4g0871 1726 Pfam TIR domain 19 120 IPR000157 GO:0007165
Tpr4g0871 1726 Pfam TIR domain 544 706 IPR000157 GO:0007165
Tpr4g0871 1726 SUPERFAMILY L domain-like 1019 1330 - -
Tpr4g0871 1726 Coils Coil 275 295 - -
Tpr4g0871 1726 Coils Coil 1237 1257 - -
Tpr4g0871 1726 Gene3D - 879 963 IPR042197 -
Tpr4g0871 1726 Gene3D - 379 463 IPR042197 -
Tpr4g0871 1726 Gene3D - 15 213 IPR035897 -
Tpr4g0871 1726 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 45 536 - -
Tpr4g0871 1726 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 552 1540 - -
Tpr4g0871 1726 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 121 IPR035897 -
Tpr4g0871 1726 ProSiteProfiles TIR domain profile. 17 156 IPR000157 GO:0007165
Tpr4g0871 1726 CDD AAA 228 362 - -
Tpr4g0871 1726 Pfam NB-ARC domain 724 949 IPR002182 GO:0043531
Tpr4g0871 1726 Pfam NB-ARC domain 227 461 IPR002182 GO:0043531
Tpr4g0871 1726 ProSiteProfiles TIR domain profile. 542 709 IPR000157 GO:0007165
Tpr4g0871 1726 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 45 536 IPR044974 GO:0006952
Tpr4g0871 1726 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 552 1540 IPR044974 GO:0006952
Tpr4g0871 1726 Gene3D Ribonuclease Inhibitor 1058 1215 IPR032675 -
Tpr4g0871 1726 Gene3D Ribonuclease Inhibitor 1216 1370 IPR032675 -
Tpr4g0871 1726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 708 974 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0871 Tpr-Chr4 8237331 8245519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0871 72 546 WRKY Transcription Factor Family AT4G12020 27.216 2.53e-34 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0871 - - cam:101511908 2153.25