Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0870 ATGATGGTTCCTCATACTCATAATTCATTTCACCATTGTTGTCAGATTATACTTGCTCTTGTGCTTTTTAGTTTGCAGATATTAACTCACATCGAGGCTTATGGCTCAAAGGTTGAAGTGCTTCCTGGTTTTGAAGGGCCTCTTCCTTTTGAACTTGAAACAGGGTATGTGGGATTGGGGGAAACAGATGATGACATGCAAGTGTTCTATTATTTTATCAAATCAGAGAATAATCCTAAGAAAGACCCTCTTATGCTTTGGTTAACCGGTGGTCCTGGTTGTTCTTCTTTTTCTGGCCTTGTCCATGAAATAGATCCAATTGAATTCGAAAACAAGGAGTACGACGGGAGTGTGCCTAGTTTGGTCTCGAGGCGACAGTCATGGACAAAGCTATGCAGCATTATTTTTGTAGATTTGCCATTTGGAACCGGTTTTTCATATGCTAAAAATCTGACTGCTCACCGAAGTGACTGGAAATTAGTTCACCATGCTCATCAATTTCTTAGGAAGTGGCTGATTGATCACACTGAATTTCTTTCAAATGAATTCTACATTGGAGGCGATTCATACTCTGGCATTCCTGTCCCGGCCATTCTTCAAGAAATTTCAAATGGAAATGAAGAAGGTCTCCAACCATAG 639 0.4022 MMVPHTHNSFHHCCQIILALVLFSLQILTHIEAYGSKVEVLPGFEGPLPFELETGYVGLGETDDDMQVFYYFIKSENNPKKDPLMLWLTGGPGCSSFSGLVHEIDPIEFENKEYDGSVPSLVSRRQSWTKLCSIIFVDLPFGTGFSYAKNLTAHRSDWKLVHHAHQFLRKWLIDHTEFLSNEFYIGGDSYSGIPVPAILQEISNGNEEGLQP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0870 212 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 13 208 - -
Tpr4g0870 212 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Tpr4g0870 212 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Tpr4g0870 212 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Tpr4g0870 212 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 208 IPR001563 GO:0004185|GO:0006508
Tpr4g0870 212 Pfam Serine carboxypeptidase 42 209 IPR001563 GO:0004185|GO:0006508
Tpr4g0870 212 Gene3D alpha/beta hydrolase 33 211 IPR029058 -
Tpr4g0870 212 SUPERFAMILY alpha/beta-Hydrolases 41 207 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0870 Tpr-Chr4 8233102 8235581 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0870 30 61 Calmodulin-binding Proteins AT2G22960 68.750 1.56e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0870 K16296 - gmx:100780069 332.798