Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0856 ATGTCTTCCTTCACTTCCTGCTTCTATAGACGCCGCAAATTTCAACCCATATCTACTACTACTAACATGAAGAAGTACGATGTGTACTTGAGTTTCTGCGACGAAGACCCTGATTTTTTTATTTTGGGTATCTATAAGGGCCTTACTTCAGGAAGTGGAATTAATGTTTTCTGGGACAATAAGAGGATTAAAAGAGGAGATCAAGAAGTACCAACCTCAGTGTTGAATGTAATTGGAGATTGCAAACTTGTTGTAATCGTATTTTCAACAAATTATTTTAATTCAAGATGGTGTCTTCAAGAATTGGAAAAAATAACTGAATGTTGCCGAACCACAGATAGTCGTCTCATGCTTCTTACTTTCTCTTTCTTCTATAATGGTGTCCATCTGGTGTTAGGATATCCGGACACTGATTTTTTTGAAAGAGAGGCTTTTCATGATTTTCTTGATAGAATCTATAAAAAAGAAATCTCCCAACAGGGGGATAAGTTCATGAGTTGGGTGGCAGCGATCAGTCATAATAAAGCTATCACTTATGCAGGATCAACATATTTGGGACACGTCTTCACAAACAGGATAGAAAGAGAACATATTGAGAATGTAGTTGAACTTGCTACTCGTGTGATAACAGAGAAGAGAGACATGTTCAATGTTTTCTATACAGAGAGTTTAAATTCGCGTGTTCAAGACGTGACTCAACTATTGAAACAATCAAAATCTCCTCTCATATTAGGGATATGGGGGATGCCAGGGATTGGTAAATCAACCATTGCCAAAGCCATTTATGGTCAGGTTGGTTCCTATTTTAGGCACAAGTGCTTGATTGAAAATGTCAAGAGATCAGTTCAGAATAAAACTTATACTCTAGTTTCTTTACAAGAGAAAATTATACTTGATATGGCCAGAGAACCTGAAAATGATATATCTACAATTGAGTCAGGAAAAGTGATTTTAAAAGAAAGACTTCATAGTAAAAGGGTACTTCTTGTACTTGACGATGTTGATAATTTGGAGCAACTGCATGCATTGTGTGGAAGTCGTGAGTGGTTTGGTGAAGGTAGCAAAATAATCATCACGACAACGAATAGGCAACTACTAAAGGAGCATGGAGCTGACCATATATACAGAGTGAAAGAACTAGACGAAAATGAATCGCTTGAGCTTTTTAATTGGAAAGCGTTCAGCCAAGCAACTTCTCAAGAAGGTTTTGCAGAACTTTCCAGACAGGTAGTTGCTTATTCTGGGGGATTGCCTCTTGCTCTTACAGACCTTGGGATCCATTTCAATTCGGAAACAGTAGATATCTGGGAGTGTAAGTTGCATAACTTCACAAGGCATTTCTATAATGGTGTACAGGGAACACTAGAAAGTAGTTTTAATGATTTAAATGATGAGGAAAAACAAGTATTCTTTGATATAGCATATTTCTATATCGGGATAGACCAACATGATGTAGTCCAATCTTTAAATAGTTCAACACATTGTACAAATCTTCTAATAAGCCTCCTTGAAGACAAAAGCTTTGTAACCATTGATGAGAATAACAAGATTCAAATGCATGTTTTGCTACAAGCCACAGCAGAAGCTATCATTACGAGGGAATCAAGTAATAAAACTGATCAGCCAAAGATGTACGATGTGTTCTTGAGTTTCAGAGGGGAAGATAGTCGTGCAAAGTTCATGTCACATCTGCATTCCTCTCTTCAAAATGCAGGGATTGATACTTTCAGAGATGATGACGAGATTCAACGAGGAGATCAAATCTCAATCTCACTGTTGAAAACAATTGGACAGTCTAGAATTTCTATTGTTGTTTTGTCAAAAAACTATGCTAATTCAAGATGGTGTATGCTAGAGTTGGAGAAGATAATGAAAATTGGCAGAGATAGGGGTCTGGTTGTTGTGCCGGTGTTCTATGAGGTGGATCCCTCAGATGTACGTCATCAGAAAGGTCAGTTTGGGAAAGGTTTTGATGATCTTACATCAAAAATCTCAGTGCATGAATCCACAAAGACTCGTTGGCAAAGAGATCTCTATGAAATTTGTGGCATTGCAGGGTTTGTCCTCATAGATTCCAGGAATGAAAGTGCTGATATCAAGAATATTGTCGAACATGTCACTCGTTTGCTAGATAGGACACAGTTATTCGTTGCTGAACATCCAGTGGGTGTAGAATCTCGTGTGGAAGCTGTGACTAAGCTACTAAACATCCAAAAAGCAGAAGATGTTTTACTAATAGGGATATGGGGAATGGGGGGTACGGGTAAAACAACCATTGCCAAATCCATTTACAACAAAGTTGGGAGAAAATTTGAGGGAAGGAGCTTTCTTCTGGGTATAAGGGAATTTTGGGAGACACATACTAATCAAGTTTCACTACAGCAACAGGTACTTTGTGATGTTTACAAAACAACAGCTTTGAAGATACGAGACATTGAATCAGGGAAAAATATATTGAAGGAAAAACTTTCCAAGAATAGGGTGCTTTTTGTGCTCGATGATGTGGATGAATTGGATCAACTAAAGGCTTTGTGTGGAAACCGTGAATGGTTTGGTCCAGGAAGTAGAATAATCATTACAACAAGAGATATGGATCTTCTTAGATCATGTGGAGTTGATCAAGTGTATACAATAGAAGAAATGGACGAAAGTGAATCTCTTGAGCTTTTCAGCTGGCACGCATTCAAGCAACCAAGTCCGACAGAGGATTATGCTACACATTCAGCAGACGTTATTGCTTATTCGGGGAAATTGCCACTAGCACTTGAAGTCCTTGGGTCCTATTTGTCTAATTGTGAAATAACAGAGTGGCAGAAAGTTTTGGAGAAACTCAAATGTATTCCCCATGACCAAGTACAGAAGAAGCTAAAAGTAAGCTTCGATGGTTTAAAAGATTTTACAGAGAAACAAATATTCCTGGATATATCTTGTTTCTTTATTGGGATGGACAAAAAGGATGTAACAGCAATATTAAATGGGTGTGGGTTTTTTGCTGATATTGGAATTAAAGTCCTTGTAGAGCGAGCGCTTTTAACTGTTGACAATAGGAACAAGCTTAGAATGCATGATTTGTTAAGAGACATGGGCAGACAAATAATTTATGAGGAATCACCATCAGATCCTGAGAAGCGCAGTAGGTTGTGGCGCTGTGATGAAGTGCAAGATATATTATCTAGGGATAAGGGAACAGAAGCTGTCAAGGGACTGGCTTTGGAGTTCCCAAGAAAAGATTGTCTGGAAACCAAAGCATTTAAGAAGATGAATAAACTCAGATTGCTTCGCCTCGCTGGGGTGAAGCTTGAGGGAGATTTTAAATACCTTTCAGGAGATCTTAGGTGGCTATACTGGCATGGATTTCCAGAAACCTACACTCCTGCAGAATTTCAGCAAGGAAGTCTAGTTGCCATTGAATTAAAATATAGTAAGCTCAACAAAATTTGGAACACGAGCCAGATGCTAGAAAATCTAAAAAATCTTAATCTTAGTCATTCTCTGGATTTGGCTGAAACCCCAAACTTTTCCTACTTGCCTAATCTTGAAAAGCTGGTACTCAAAGACTGTCCAAGTTTGTCTACAGTCTCCCATAGCATTGGATCTCTACATAAACTTCTTATGTTAAATTTGACAGACTGCACAGGTCTTCAGACACTTCCGAGAAGCATCTATAAATTAAAGTCTCTAGAAACTTTGATTCTTTCAGGATGCTCCAAGATTGACAAATTGGAGGAGGATTTGGAACAAATGGAATCATTGATTACCTTGATTGCGGATAAGACTGGTATAACAAAAGTGCCATTTTCAATAGTGAGATTGAAAAGCATCGGATATATTTCTTTAAGTGGCTTTGAAGGATTTTCTCGTGATGTATTCCCTTCTCTAATTCGGTCTTGGATGTCGCCATCAAATAATGTGATATCCCTAGTTCAAACATCAGTGTCCATGTCATCACTTGGTACTTCAAAAGACCTTCAAAAACTTCGAATTATTTGTGCGAAGTGTGATTCAGAGTTACAACTAACTCGAGATATAGCAAGGTTTTTGGAAGTATTAAAAGCCACAAATTGTCAGAACTTGGAAGCAAGTGCAAGTTCAACTGCATCAGAGATCTCTGATATGCATGCTTCTCCCGTAAGTGATTGCATTGGTCATTTTCGCAATTTAGGGTCAAAGAATCACTTGAAATCTCTCTTAATTCAAATGGGAACAAAATGCCAAATCTCTAATGTTGCTGAAGACAGTGTTTTACAGACTGCAGATGGGACTTGGGATTTATTTTTACTCGGCTGTGACAATAAATCTGATTGGCTAACTTTCAGTTGCAAAGGTTGTTCGATAATATTTGATGTCCCAACAATGAAGGGGAGTTACCTGAAGAGTATGATGTTGTACATTGTCTATTACTCTTGCTCGGAAAACATAACATCAGAAGGTTTCCAAGGTATGTTAATCATAAATTACACAAAGACAACCATTCATGCATATAAAACAGATACACTAACCTCCTTTGACGACGAGGATTGGCAGAGCATAACCTCAAATCTAGAACCTGGTAACAAAGTGGGGGTTATGGTTGTTTTTGGGGAGGGTTTCATTGTTGAGAAGACCATAGTATCTCTCTTATATGATGAACCACTAGACAAAGAAATGGAACGCAGTCATTTAATAGACGAGGAGGATCTTGTTTCTGGCAATGACAATAAAAATGTTAGTGTTTCTTGTGGTGATAATGAAGCCATCAATCGCTTTGCAGAGGAAATGGTGAACCACATGCAGATCACCATGTACGGTGGTGGTATATATGCTGATGCTGTGGGACCATTACAACTAGTACCACATGACCCTGACCAGCCTGCAGAGGCAGTAGCTGAGGAGATTCCTGCAGCTGAAGCATATGGTGATCAGGAGCAACAGGTTCCTCCACCTGAGGGTCAACCTGAGCAGCAGGCAACAGCTGCACCTGAGGCCATTGGGTCGGCCTTAGGAGCTCAGATTTTGGATGCCTTTAGAGAGCTGAGGGCTGATTTCTTCCAACTAGAGCAGACTGTTACTGCTAGGCTGAATGCAGTAGAGGTCAGATTAGTGGTGCTTGAGGATGCCATAGCAGAGATACCACGTGGCTCGAATTCTGAGTTCACCGCCGTGGAGAGCTAG 5151 0.3914 MSSFTSCFYRRRKFQPISTTTNMKKYDVYLSFCDEDPDFFILGIYKGLTSGSGINVFWDNKRIKRGDQEVPTSVLNVIGDCKLVVIVFSTNYFNSRWCLQELEKITECCRTTDSRLMLLTFSFFYNGVHLVLGYPDTDFFEREAFHDFLDRIYKKEISQQGDKFMSWVAAISHNKAITYAGSTYLGHVFTNRIEREHIENVVELATRVITEKRDMFNVFYTESLNSRVQDVTQLLKQSKSPLILGIWGMPGIGKSTIAKAIYGQVGSYFRHKCLIENVKRSVQNKTYTLVSLQEKIILDMAREPENDISTIESGKVILKERLHSKRVLLVLDDVDNLEQLHALCGSREWFGEGSKIIITTTNRQLLKEHGADHIYRVKELDENESLELFNWKAFSQATSQEGFAELSRQVVAYSGGLPLALTDLGIHFNSETVDIWECKLHNFTRHFYNGVQGTLESSFNDLNDEEKQVFFDIAYFYIGIDQHDVVQSLNSSTHCTNLLISLLEDKSFVTIDENNKIQMHVLLQATAEAIITRESSNKTDQPKMYDVFLSFRGEDSRAKFMSHLHSSLQNAGIDTFRDDDEIQRGDQISISLLKTIGQSRISIVVLSKNYANSRWCMLELEKIMKIGRDRGLVVVPVFYEVDPSDVRHQKGQFGKGFDDLTSKISVHESTKTRWQRDLYEICGIAGFVLIDSRNESADIKNIVEHVTRLLDRTQLFVAEHPVGVESRVEAVTKLLNIQKAEDVLLIGIWGMGGTGKTTIAKSIYNKVGRKFEGRSFLLGIREFWETHTNQVSLQQQVLCDVYKTTALKIRDIESGKNILKEKLSKNRVLFVLDDVDELDQLKALCGNREWFGPGSRIIITTRDMDLLRSCGVDQVYTIEEMDESESLELFSWHAFKQPSPTEDYATHSADVIAYSGKLPLALEVLGSYLSNCEITEWQKVLEKLKCIPHDQVQKKLKVSFDGLKDFTEKQIFLDISCFFIGMDKKDVTAILNGCGFFADIGIKVLVERALLTVDNRNKLRMHDLLRDMGRQIIYEESPSDPEKRSRLWRCDEVQDILSRDKGTEAVKGLALEFPRKDCLETKAFKKMNKLRLLRLAGVKLEGDFKYLSGDLRWLYWHGFPETYTPAEFQQGSLVAIELKYSKLNKIWNTSQMLENLKNLNLSHSLDLAETPNFSYLPNLEKLVLKDCPSLSTVSHSIGSLHKLLMLNLTDCTGLQTLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESLITLIADKTGITKVPFSIVRLKSIGYISLSGFEGFSRDVFPSLIRSWMSPSNNVISLVQTSVSMSSLGTSKDLQKLRIICAKCDSELQLTRDIARFLEVLKATNCQNLEASASSTASEISDMHASPVSDCIGHFRNLGSKNHLKSLLIQMGTKCQISNVAEDSVLQTADGTWDLFLLGCDNKSDWLTFSCKGCSIIFDVPTMKGSYLKSMMLYIVYYSCSENITSEGFQGMLIINYTKTTIHAYKTDTLTSFDDEDWQSITSNLEPGNKVGVMVVFGEGFIVEKTIVSLLYDEPLDKEMERSHLIDEEDLVSGNDNKNVSVSCGDNEAINRFAEEMVNHMQITMYGGGIYADAVGPLQLVPHDPDQPAEAVAEEIPAAEAYGDQEQQVPPPEGQPEQQATAAPEAIGSALGAQILDAFRELRADFFQLEQTVTARLNAVEVRLVVLEDAIAEIPRGSNSEFTAVES* 1717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0856 1716 Gene3D Ribonuclease Inhibitor 1054 1215 IPR032675 -
Tpr4g0856 1716 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 51 538 - -
Tpr4g0856 1716 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 553 1541 - -
Tpr4g0856 1716 Pfam TIR domain 25 124 IPR000157 GO:0007165
Tpr4g0856 1716 Pfam TIR domain 545 707 IPR000157 GO:0007165
Tpr4g0856 1716 SUPERFAMILY "Winged helix" DNA-binding domain 451 535 IPR036390 -
Tpr4g0856 1716 SMART AAA_5 742 879 IPR003593 -
Tpr4g0856 1716 SMART AAA_5 240 385 IPR003593 -
Tpr4g0856 1716 SUPERFAMILY Toll/Interleukin receptor TIR domain 536 685 IPR035897 -
Tpr4g0856 1716 Gene3D - 20 211 IPR035897 -
Tpr4g0856 1716 PRINTS Disease resistance protein signature 745 760 - -
Tpr4g0856 1716 PRINTS Disease resistance protein signature 822 836 - -
Tpr4g0856 1716 PRINTS Disease resistance protein signature 915 929 - -
Tpr4g0856 1716 PRINTS Disease resistance protein signature 1222 1238 - -
Tpr4g0856 1716 ProSiteProfiles TIR domain profile. 24 156 IPR000157 GO:0007165
Tpr4g0856 1716 ProSiteProfiles TIR domain profile. 543 710 IPR000157 GO:0007165
Tpr4g0856 1716 Gene3D Ribonuclease Inhibitor 1216 1404 IPR032675 -
Tpr4g0856 1716 Pfam NB-ARC domain 725 950 IPR002182 GO:0043531
Tpr4g0856 1716 Pfam NB-ARC domain 228 460 IPR002182 GO:0043531
Tpr4g0856 1716 Gene3D - 537 708 IPR035897 -
Tpr4g0856 1716 Gene3D - 880 964 IPR042197 -
Tpr4g0856 1716 Gene3D - 379 463 IPR042197 -
Tpr4g0856 1716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 709 975 IPR027417 -
Tpr4g0856 1716 SMART till_3 25 163 IPR000157 GO:0007165
Tpr4g0856 1716 SMART till_3 544 684 IPR000157 GO:0007165
Tpr4g0856 1716 Coils Coil 1238 1258 - -
Tpr4g0856 1716 Gene3D - 212 373 IPR027417 -
Tpr4g0856 1716 Gene3D - 709 875 IPR027417 -
Tpr4g0856 1716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 473 IPR027417 -
Tpr4g0856 1716 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51 538 IPR044974 GO:0006952
Tpr4g0856 1716 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 553 1541 IPR044974 GO:0006952
Tpr4g0856 1716 SUPERFAMILY L domain-like 1017 1358 - -
Tpr4g0856 1716 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 120 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0856 Tpr-Chr4 8104569 8112508 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0856 9 547 WRKY Transcription Factor Family AT4G12020 26.582 5.70e-36 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0856 - - cam:101511908 2157.1