Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0854 ATGTCTTCCTTCACTTCCTCCTCAAAAAACCACCACGAATTTGAATCCACGTCTACTACTACAAAACCAAAGAGGGAGCGCTACCATGTGTACTTGAGTTTCTGTGCCAAAGATACAGATTCTTTTGTTTCTTGTCTCCATGTGGCTTTTAGATCAAAGGCTAGACAGGCTATTTTCTTGGGCTTTGACAAGATTGGAGATGAAGATCGGGCAATAACACCCTCAGAGCTGACTGTAATTGAAGAGTTTAGAACTGCTATGATCATATTTTCAAGAAATTATGCTAATTCAAGGCGGTGTCTTATAGAATTGGAGAAAATAACCGAGTGTTGCAGAACCACAGATGGTCTTAATGTTCTCCCTTTTTTCTATGATGGTGTCTATCCCTCCTACGGACGTTTGAAGAGTGGTATGTTTGGTGAGGCTTTTCATGATTTTGTGGATAGAATGACCACTATAAAGGAAACCTCTAAAGAGGAAGACAAGTTAATGAGTTGGGTAGCGGCTATCAGTACTACTACAGATAAAGCTTCCAAATTTTCAGGATCAATAGAACCAACACAAGAATACCGGACCCAAAGTGAACATATTGATGGTATAGTTGAATGCGTTAGTTATGCCATAATCAGGCCGTCAACCAGATACTACCATCCTTATACAGTGAGTCTGAACTCTGCTGTGCAAGATGTGATTCAGTTATTGAAACAATCAAAAAGTCCTCTCCTACTAGGGATATGGGGGATGGAAGGGATTGGTAAATCAGCCATTGCCGAAGCCATTTATCATCAAATTGGTCCCTATTTTGAGGGCATGTGCATCCTCCATTACGTCGGGTATTTTTGGAAAAAAAATGATGGTCAAGTTTCTTTACATCAGAGCCTTTTTCATGACATCATAAAAAGAAATAAAACTAAAAATAGAAATATAGATAGAAGTAAAAAAAAGAAACTTAAAATTGAATCAGAAAAAATGATTTTAAAAGAAAGTCTTCAACATAAAAGGGTACTTCTTGTACTTGACGGTGTTGATAAATTGGAGCAGCTAAAGGCTTTGTGTGGTAGTCGGGAATGGTTTGGTGCTGGTAGCAAAATAATCATCACTACAAGAGATAGACATCTACTGAAGGAGCATGGAGTTGACCATATATATAGAGTGAAAGAATTGGACGAAAGTGAATCACTTGAGGTTTTTAATACTTCTTTAAGCTGCCATAAAACTTCTCTAGAACGTTTTGCTGAACTTTCCAGACAGGTAGTTTCTTATTGTGGGGGATGGCCTCTTGCTCTTCAAGAACTTGGGTACTTTTTGTCTACAAAGGAAGCACTTGAATGGAAAGATGCGTTAAGGAGTCTCGAAAGATTTTCCATTCCAGCTCCACATCTACAGGAGACTCTAGAAAAGAGTTTTAGAGATTTGAGTAATATAGAAAAACACATCTTCCTTGATATATCATGTTTCTTTATCGGGAAGAATAAAAATGATGTACTCCAAACGTTAAATAGGTCAACACAAAGTGCGGCTTATCAAATAAGTCTCCTGGAAGACAAGAGCCTTATAACAACCGATAAGAATAACAAGCTTGCAATGCATGTTATTCTACAAGCCATGGCAGGACATATCATTAGAAAGGAATCAGGTTATATGACTAAACATCAGCCAAAGATGTACGATGTCTTCTTGAGTTTTAGAGGGGAAGACAGTCGTGTGAAATTCATTTCACATTTGTATTCCTCTCTTCAAAATGCGGGCATTTATGTTTTCAGAGACAATGATGAGATACAACAAGGAGATCAGATCTCAACCACACTGTTGCAAGCAATTGGACGGTGTAGAATTTCTATCGTTGTTTTGACTACAAATTATGCTAATTCAAAATGGTGTCTGCTAGAGTTGGAGAAGATCATGGAATTCAGCATGACCAGGGGTTTGGTGGTTGTGCCAGTGTTCTATGAGGTCAATCCCAAAGAAGTACGTCATCAGAATGGTCAGTTTGGATTAGCTTTTGAAGATTTTTTATTAAAAAATTCAGTGGATGAATTCACCAAGAGTAATTGGAAAAGGGAACTCTCTCATATTGGTGCCATAGCAGGGTTTGTACTCGCAGGTTCCAGGAATGAATACGAAGATATCAAGGGTATTGTTGACCATGTCACCCGGTTGCTAGATAGGAAAGAGTTATTTGTTGCTGAACATCCGGTAGGAGTGAAATCTCGTGTGCAAGCTGCAACTAAGCTATTAAACATTCAAAAATCAGAAGATGTTTTACTTCTAGGGATTTGGGGAATGGGGGGTACGGGTAAAACAACCATTTCCAAAGCCATTTACAATGAAATTGGGAGCGAGTTTGAGGGAAGGAGCTTCCTGCTGAATATAAGGGAATTTTGGGAGTCGCATACTAATCAAGTTTCACTACAGCAACAAGTACTTTGTGATGTTTACAAAACAGCAACATTCAAGATACGTGACATTGAATCAGGGAAAAATATATTGAAGGAAAGACTTTCCCAAAGTAGGGTACTTCTTGTGCTTGATGATGTGAATGCATTGGATCAGCTAATGGCTTTGTTTGGAAGCCGCAAATGGTTTGGTCCGGGGAGTAGAATAATCATCACAACAAGAGACAAGAATCTTCTTGAATTATGTGGAGTTGATGAAGTGTATACAGTAGAAGGAATGGACGAAAGTGAATCTCTTGAGCTTTTCAGTTGGCATGCATTCAAGCAACCAAGTCCGACAAAAGCTTTTGCTGCACATTCAGCAGATGTGATTGCTTATTCCGGGAGATTGCCACTAGCACTTCAAGTCCTTGGGTGCTATTTGTCTAAATGTGAAATAACAGAGTGGCAGAAAGTTTTGGAGAAACTCAGATGTATTCCCCATGATGAAGTACATAAGAAGCTAAAAGTGAGCTTCGATGGTTTAAAAGATGTTACAGAGAAACAAATATTTCTTGATATAGCCTGTTTCTTTATCGGGGTAGATCGATATGATGTAATTCAAATATTAAACGGTTGTGGATTTTTTGCTGATTCTGGAATGAAAGTCCTTGAAGAGCGAAGTCTTTTAACTGTTGACAGTAGGAACAAGCTTAGAATGCATGATTTGTTAAGAGACATGGGAAGACAAATAATTTTTGAGGAATCACCATTTGATCCTGAAAACCGCAGTAGGTTGTGGCGCCATGAGGAAGTGTTTGATATATTATCAAAGGATAAGGGAACTGGAGCTGTCAAGGGACTGACTTTGGAGTTTCCAATACAAAACACAGTTTGTCTGAATACCAAAGCATTCAAGAAGATGAATAAACTCAGATTGCTTCAACTTTCTAGGGTGCAGCTTAATGGAGATTTTAAATATCTTTCGGGAGATCTTAGATGGCTGTACTTGCATGGATTAAAATTTCCATCATCTTATGCTCCTGCAGAATTTCAGCAACGAAGTCTAGTTGTCCTCAGGTTAAAATATAGTAATCTCAAACAACTATGGAAGAAAAGCCAGATGCTAGAGAATCTGAAAATTCTTAATCTTAGTCATTCTATGGATTTAACTGAAACTCCTGACTTCTCATATATGCCTAATCTTGAAAAGCTAGTACTCAAAGACTGTCCAAGGTTGTCAACAGTCTCCCATAGCATTGGATCTCTCCATAAACTTCTTCTGATAAATTTGACAGACTGCACAGGTCTTCGAAAACTTCCGAGAACAATTTATCAATTAAAATCTCTAGAAACTTTGATTCTTTCAGGGTGTTCCATGATTGATAAATTGGAGGAAGACTTGGAACAGATGGAATCATTGACAACCTTGATTGCGAATAAGACTGCAATAAAAAAAGTGCCTATTTCAATAGTAAGATTAAAAAGCATTGTGTATATTTCTCTTTCTGGCTGTGAAGGATTACCGCGTGATGTATTTCCTTATGTCATTCGGTCTAGGATGTCACCAACAAATAATGTGATATCCCTAGTTCAAAGATCTGCGTCCATGCCATCCATTGTTTTATTGGAACTTATAAAGCATAGATGTCTTTATGTGGAGTGTGTCTCAGATCTACAACTAACTCAAGTTGTAGCAATAATTTTGGATGTATTAAAAGCCACAAACTGTCAGAACTTGGAAGCAAGTGCAAGTTCAACTACATCGCAGATCTCTGATGTGCAAACTTCTCCAGGGTCAAAGAATTACCTGAAATATCTCTTAATTCAAATGGGAACAAAATGTCAAGTCTCCAATACTGCCGAAGATAGTGTTTTACAGACTGCAGATGGGACTTGCGATTCATTTTTACTCCTCTGTGACGATAAATCTGATTGGTTAACCTTCAGCTGCAATGGTTGTTCTATAATATTTGATGTCCCAACAATGAAGGGGAGTAACCTGAAGAGCATGATGTTGTCTGTTGTCTATTACTCTTCCTCGGATAACATAACATCAGAAGGATGCCAAGGTGTATTAATCAGAAATTACACAAAGACAACCATTCATGCATATAAAAGAGATACACTAACCTCCTTTGATGATGAGGATTGGCAGAGCATAACCTCAAATCTAGAACCTGGTAACAAAGTGGAGGTTATGGTTGTTTTTGGGGAGGGTTTCATCGTTGACAAGACTACAATATCTCTCTTATATGATGAACCACTCAACAAAGAAATGGAACACTGTCATCTAGTAGATGAGGAGGATGTTATTGTTTCTGGCAATGACGGTTATAATTTTAGTGGTTCTGGTGGTGATAATGAAGTCACCAATCACTATAGAGAGGAAACGGTGAACCACATGCAGATCACCATGTATGCTGGTGGGTTATATGCTGATGTCGTGGGACCAGTACAACTAGTACCACATGACCCTGACCAGCCTGCAGAGGCAGCAGTTGAGGAGATTCCTGCAGCTGAAGCATATGGTGATCAGGAGCAACAAGTTCCTTTACCCAAGTGTCAGCCAGAGCAGCAGGCAACAGCTGCACCTGAGGCCATTGGATCGGCCTTAGGAGCTCAGATTTTGGATGCCCTCAGAGAGCTGAGGGCTGATTTCTTCCAACTAGAGCAGACTGTTACTGCTAGGTTTGATGCAGTAGAGGTCAGGTTAGAGGTGCTTGAGGATGTCATGGCCCAGATACCGCGTTGGTCGAATTCTGAGTCCACCGACGTTTAG 5157 0.3913 MSSFTSSSKNHHEFESTSTTTKPKRERYHVYLSFCAKDTDSFVSCLHVAFRSKARQAIFLGFDKIGDEDRAITPSELTVIEEFRTAMIIFSRNYANSRRCLIELEKITECCRTTDGLNVLPFFYDGVYPSYGRLKSGMFGEAFHDFVDRMTTIKETSKEEDKLMSWVAAISTTTDKASKFSGSIEPTQEYRTQSEHIDGIVECVSYAIIRPSTRYYHPYTVSLNSAVQDVIQLLKQSKSPLLLGIWGMEGIGKSAIAEAIYHQIGPYFEGMCILHYVGYFWKKNDGQVSLHQSLFHDIIKRNKTKNRNIDRSKKKKLKIESEKMILKESLQHKRVLLVLDGVDKLEQLKALCGSREWFGAGSKIIITTRDRHLLKEHGVDHIYRVKELDESESLEVFNTSLSCHKTSLERFAELSRQVVSYCGGWPLALQELGYFLSTKEALEWKDALRSLERFSIPAPHLQETLEKSFRDLSNIEKHIFLDISCFFIGKNKNDVLQTLNRSTQSAAYQISLLEDKSLITTDKNNKLAMHVILQAMAGHIIRKESGYMTKHQPKMYDVFLSFRGEDSRVKFISHLYSSLQNAGIYVFRDNDEIQQGDQISTTLLQAIGRCRISIVVLTTNYANSKWCLLELEKIMEFSMTRGLVVVPVFYEVNPKEVRHQNGQFGLAFEDFLLKNSVDEFTKSNWKRELSHIGAIAGFVLAGSRNEYEDIKGIVDHVTRLLDRKELFVAEHPVGVKSRVQAATKLLNIQKSEDVLLLGIWGMGGTGKTTISKAIYNEIGSEFEGRSFLLNIREFWESHTNQVSLQQQVLCDVYKTATFKIRDIESGKNILKERLSQSRVLLVLDDVNALDQLMALFGSRKWFGPGSRIIITTRDKNLLELCGVDEVYTVEGMDESESLELFSWHAFKQPSPTKAFAAHSADVIAYSGRLPLALQVLGCYLSKCEITEWQKVLEKLRCIPHDEVHKKLKVSFDGLKDVTEKQIFLDIACFFIGVDRYDVIQILNGCGFFADSGMKVLEERSLLTVDSRNKLRMHDLLRDMGRQIIFEESPFDPENRSRLWRHEEVFDILSKDKGTGAVKGLTLEFPIQNTVCLNTKAFKKMNKLRLLQLSRVQLNGDFKYLSGDLRWLYLHGLKFPSSYAPAEFQQRSLVVLRLKYSNLKQLWKKSQMLENLKILNLSHSMDLTETPDFSYMPNLEKLVLKDCPRLSTVSHSIGSLHKLLLINLTDCTGLRKLPRTIYQLKSLETLILSGCSMIDKLEEDLEQMESLTTLIANKTAIKKVPISIVRLKSIVYISLSGCEGLPRDVFPYVIRSRMSPTNNVISLVQRSASMPSIVLLELIKHRCLYVECVSDLQLTQVVAIILDVLKATNCQNLEASASSTTSQISDVQTSPGSKNYLKYLLIQMGTKCQVSNTAEDSVLQTADGTCDSFLLLCDDKSDWLTFSCNGCSIIFDVPTMKGSNLKSMMLSVVYYSSSDNITSEGCQGVLIRNYTKTTIHAYKRDTLTSFDDEDWQSITSNLEPGNKVEVMVVFGEGFIVDKTTISLLYDEPLNKEMEHCHLVDEEDVIVSGNDGYNFSGSGGDNEVTNHYREETVNHMQITMYAGGLYADVVGPVQLVPHDPDQPAEAAVEEIPAAEAYGDQEQQVPLPKCQPEQQATAAPEAIGSALGAQILDALRELRADFFQLEQTVTARFDAVEVRLEVLEDVMAQIPRWSNSESTDV* 1719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0854 1718 SUPERFAMILY Toll/Interleukin receptor TIR domain 25 149 IPR035897 -
Tpr4g0854 1718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 720 986 IPR027417 -
Tpr4g0854 1718 MobiDBLite consensus disorder prediction 1 20 - -
Tpr4g0854 1718 Pfam NB-ARC domain 740 959 IPR002182 GO:0043531
Tpr4g0854 1718 Pfam NB-ARC domain 226 457 IPR002182 GO:0043531
Tpr4g0854 1718 SUPERFAMILY L domain-like 1031 1307 - -
Tpr4g0854 1718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 483 IPR027417 -
Tpr4g0854 1718 Gene3D - 723 885 IPR027417 -
Tpr4g0854 1718 Gene3D - 214 381 IPR027417 -
Tpr4g0854 1718 Coils Coil 1253 1273 - -
Tpr4g0854 1718 PRINTS Disease resistance protein signature 756 771 - -
Tpr4g0854 1718 PRINTS Disease resistance protein signature 833 847 - -
Tpr4g0854 1718 PRINTS Disease resistance protein signature 926 940 - -
Tpr4g0854 1718 PRINTS Disease resistance protein signature 1237 1253 - -
Tpr4g0854 1718 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 36 546 - -
Tpr4g0854 1718 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 564 1544 - -
Tpr4g0854 1718 SMART AAA_5 239 388 IPR003593 -
Tpr4g0854 1718 SMART AAA_5 753 893 IPR003593 -
Tpr4g0854 1718 Pfam TIR domain 28 202 IPR000157 GO:0007165
Tpr4g0854 1718 Pfam TIR domain 556 717 IPR000157 GO:0007165
Tpr4g0854 1718 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 564 1544 IPR044974 GO:0006952
Tpr4g0854 1718 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 36 546 IPR044974 GO:0006952
Tpr4g0854 1718 Gene3D - 553 722 IPR035897 -
Tpr4g0854 1718 Gene3D - 25 213 IPR035897 -
Tpr4g0854 1718 Gene3D - 891 982 IPR042197 -
Tpr4g0854 1718 Gene3D - 387 479 IPR042197 -
Tpr4g0854 1718 SUPERFAMILY Toll/Interleukin receptor TIR domain 551 695 IPR035897 -
Tpr4g0854 1718 SMART till_3 555 695 IPR000157 GO:0007165
Tpr4g0854 1718 SMART till_3 27 176 IPR000157 GO:0007165
Tpr4g0854 1718 ProSiteProfiles TIR domain profile. 554 721 IPR000157 GO:0007165
Tpr4g0854 1718 Gene3D Ribonuclease Inhibitor 1083 1331 IPR032675 -
Tpr4g0854 1718 ProSiteProfiles TIR domain profile. 26 208 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0854 Tpr-Chr4 8085192 8093783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0854 221 558 WRKY Transcription Factor Family AT4G12020 29.738 1.21e-30 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0854 - - cam:101511908 2127.83